Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16i13
         (602 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    27   0.14 
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           27   0.14 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   4.0  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    22   5.3  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   7.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.0  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   7.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.0  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 513 PQASPRRSSLHYLHPAG 563
           P+ +P   SLHYLH AG
Sbjct: 513 PRLNPNEKSLHYLHIAG 529


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 513 PQASPRRSSLHYLHPAG 563
           P+ +P   SLHYLH AG
Sbjct: 513 PRLNPNEKSLHYLHIAG 529


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +1

Query: 373 GYHAVAGGR 399
           GYHA+AGG+
Sbjct: 289 GYHAIAGGQ 297


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 111 KISRRQKSANRKQKYIKVKLY 49
           KI   Q S   +Q+Y  +KLY
Sbjct: 76  KIGESQGSVTLRQEYKNIKLY 96


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +3

Query: 396 TMDEEWFGGLLSTIRNDLLQLQYLDEQAAHRRPLLDIGLPQASPR 530
           +MDE   GG++S I + ++ L  L      +R L    L    P+
Sbjct: 2   SMDETHGGGMVSAILSSIVLLLLLGRTVDAQRSLEFFDLLPEDPK 46


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 205 ENVNRCLLKNHRNG 164
           E V  CLLK  RNG
Sbjct: 286 EEVFDCLLKKERNG 299


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 505 MSSSGRLWAACSSKYCNCNK 446
           ++ S R    C+SKYC   K
Sbjct: 72  LAESSRSIDPCASKYCGIGK 91


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +3

Query: 279 HVRRVKNCHYSRHPYLKLSY---RAQTRILEKPHR 374
           HVR   N   + H YLK SY   RA + I E   R
Sbjct: 92  HVRDFLNGLDNLHEYLKFSYPRMRAPSFICENETR 126


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 205 ENVNRCLLKNHRNG 164
           E V  CLLK  RNG
Sbjct: 376 EEVFDCLLKKERNG 389


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,017
Number of Sequences: 438
Number of extensions: 4565
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)