Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16i06
         (220 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88167-4|AAB42228.3|  452|Caenorhabditis elegans Tetraspanin fam...    28   1.0  
Z72508-7|CAA96642.1|  336|Caenorhabditis elegans Hypothetical pr...    27   2.4  
Z72504-1|CAA96603.2| 1193|Caenorhabditis elegans Hypothetical pr...    25   7.3  
EF535106-1|ABQ15208.1| 1206|Caenorhabditis elegans transient rec...    25   7.3  
AF101318-9|AAC69349.1|  350|Caenorhabditis elegans Serpentine re...    25   7.3  
Z75534-1|CAH04713.2|  326|Caenorhabditis elegans Hypothetical pr...    25   9.6  
AL032626-3|CAA21540.1|  306|Caenorhabditis elegans Hypothetical ...    25   9.6  

>U88167-4|AAB42228.3|  452|Caenorhabditis elegans Tetraspanin family
           protein 19 protein.
          Length = 452

 Score = 27.9 bits (59), Expect = 1.0
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = +3

Query: 30  VTLNDDNLYYSQ*N*RCVVQSVLKIFYKAVNLIKL*IKTVRSYHNVRFFLYHYN 191
           +TL++    +S+     +    + +FYK ++ +KL  KT+R      F +Y Y+
Sbjct: 229 LTLSNPKTPFSKLQTPTITGGKISVFYKGLSYLKLTNKTIRVPVTREFSIYEYH 282


>Z72508-7|CAA96642.1|  336|Caenorhabditis elegans Hypothetical
           protein F28H7.11 protein.
          Length = 336

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 197 LFIIMIQKKTYIVIAPYRFNL*FYKV 120
           LFI MI K TY+ +  Y++ L ++ +
Sbjct: 24  LFIFMIMKDTYLNMGSYKYLLFYFSI 49


>Z72504-1|CAA96603.2| 1193|Caenorhabditis elegans Hypothetical protein
            C29E6.2 protein.
          Length = 1193

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 215  FFPVIYLFIIMIQKKTYIVI 156
            FFPV  LFII      Y+++
Sbjct: 958  FFPVFVLFIIAFSSSFYVIL 977


>EF535106-1|ABQ15208.1| 1206|Caenorhabditis elegans transient receptor
            potential subfamilyA-1 protein.
          Length = 1206

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 215  FFPVIYLFIIMIQKKTYIVI 156
            FFPV  LFII      Y+++
Sbjct: 971  FFPVFVLFIIAFSSSFYVIL 990


>AF101318-9|AAC69349.1|  350|Caenorhabditis elegans Serpentine
           receptor, class t protein56 protein.
          Length = 350

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 212 FPVIYLFIIMIQKKTYIVI 156
           +PV+Y+F   I+ K YIV+
Sbjct: 81  WPVLYIFFTKIKMKAYIVM 99


>Z75534-1|CAH04713.2|  326|Caenorhabditis elegans Hypothetical
           protein F08A10.2 protein.
          Length = 326

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 218 FFFPVIYLFIIMIQKKTYIVIAPYRFN 138
           F F  IYLF + I    Y+ +  YR+N
Sbjct: 20  FIFSAIYLFSLFIMFPIYVYV--YRYN 44


>AL032626-3|CAA21540.1|  306|Caenorhabditis elegans Hypothetical
           protein Y37D8A.3 protein.
          Length = 306

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 114 PCRISSTRFGPHIVSFTENNIDY 46
           PC  S+    PH  +FT+NN  Y
Sbjct: 64  PCVTSNAGTHPHGSTFTKNNFHY 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,437,990
Number of Sequences: 27780
Number of extensions: 65112
Number of successful extensions: 112
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 112
length of database: 12,740,198
effective HSP length: 52
effective length of database: 11,295,638
effective search space used: 225912760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)