Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16i06
         (220 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   2.3  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   2.3  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    20   4.0  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    19   9.2  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    19   9.2  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    19   9.2  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    19   9.2  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    19   9.2  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    19   9.2  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    19   9.2  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.6 bits (41), Expect = 2.3
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -3

Query: 215 FFPVIYLFIIMIQKKTYI 162
           FFP+++ F  +    TY+
Sbjct: 422 FFPIVFAFFNLAYWSTYL 439


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.6 bits (41), Expect = 2.3
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -3

Query: 215 FFPVIYLFIIMIQKKTYI 162
           FFP+++ F  +    TY+
Sbjct: 422 FFPIVFAFFNLAYWSTYL 439


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 19.8 bits (39), Expect = 4.0
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +2

Query: 161 QCTFFFVSL 187
           +CTFFF+S+
Sbjct: 6   RCTFFFLSV 14


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 216 FFPSYLFIYYNDTK 175
           F+P+   IY+ND K
Sbjct: 186 FWPTGRGIYHNDDK 199


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 219 FFFPSYLFIYYNDT 178
           F F ++ FI+Y  T
Sbjct: 475 FMFLTFFFIHYKGT 488


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 219 FFFPSYLFIYYNDT 178
           F F ++ FI+Y  T
Sbjct: 461 FMFLTFFFIHYKGT 474


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 219 FFFPSYLFIYYNDT 178
           F F ++ FI+Y  T
Sbjct: 495 FMFLTFFFIHYKGT 508


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 219 FFFPSYLFIYYNDT 178
           F F ++ FI+Y  T
Sbjct: 444 FMFLTFFFIHYKGT 457


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 78  CVVQSVLKIFYK 113
           C++Q VLK+  K
Sbjct: 121 CMIQEVLKLMKK 132


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 216 FFPSYLFIYYNDTK 175
           F+P+   IY+ND K
Sbjct: 202 FWPTGRGIYHNDDK 215


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,845
Number of Sequences: 438
Number of extensions: 1008
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3281070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)