Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16h23
(630 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 31 0.10
SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 30 0.24
SPAC31G5.16c |dpm1||dolichol-phosphate mannosyltransferase catal... 28 0.97
SPCC1223.08c |dfr1||dihydrofolate reductase Dfr1|Schizosaccharom... 28 1.3
SPAC31G5.08 |ups1|ups|uroporphyrinogen-III synthase Ups1|Schizos... 27 1.7
SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces pom... 27 1.7
SPAC6C3.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 2.2
SPCC320.05 |||sulphate transporter |Schizosaccharomyces pombe|ch... 27 2.2
SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pomb... 27 2.2
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.0
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 26 3.9
SPBC29B5.02c |isp4||OPT oligopeptide transporter family |Schizos... 26 3.9
SPBC14F5.12c |cbh2||centromere binding protein Cbh2|Schizosaccha... 26 5.2
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 26 5.2
SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces... 26 5.2
SPBC119.01 |rpn3|SPBPJ4664.07|19S proteasome regulatory subunit ... 26 5.2
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 26 5.2
SPBC1718.06 |msp1|mgm1|mitochondrial GTPase Msp1|Schizosaccharom... 25 6.8
SPAC806.08c |mod21||gamma tubulin complex subunit Mod21|Schizosa... 25 6.8
SPCC584.12 |mug42||sequence orphan|Schizosaccharomyces pombe|chr... 25 9.0
SPBC18H10.11c |||conserved fungal protein|Schizosaccharomyces po... 25 9.0
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 31.5 bits (68), Expect = 0.10
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = +2
Query: 326 TIQTNYDKLQNLIDKHLD-SIDNC-LRPLVNEILD-EEPNPDDEAQTKKLFRKI 478
T++ N+D LQN I + D + +C + LV +I ++ N D++ T KL +KI
Sbjct: 768 TLRENFDSLQNAIMETFDKQVTHCSVNHLVQQIRKLKDENKKDQSGTDKLMKKI 821
>SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 600
Score = 30.3 bits (65), Expect = 0.24
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Frame = +2
Query: 89 NENVVKNIANEVARECQSQNVAVDPDFVIYLIDLLLLNPKYGKLFTKTINRNNLQFFVGD 268
N N+ K + + C +NVA PDF + ++ ++ YG F K + L+ + G
Sbjct: 398 NSNLEKRVEKYIKHSCSQRNVADHPDFALKVVGAVV---DYGWTFPKPKFSDILRDYWGK 454
Query: 269 CVDL---LIRDSTSIKTLKMQFTIQTNYDKLQNLIDKHLDSI 385
+L L+ S + + T+Q + + + +H+ I
Sbjct: 455 KANLPTALLDTSINSNWCNYEDTVQVSVRLNRPMYVRHISLI 496
>SPAC31G5.16c |dpm1||dolichol-phosphate mannosyltransferase
catalytic subunit Dpm1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 28.3 bits (60), Expect = 0.97
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 173 IYLIDLLLLNPKYGKLFTKTINRNNLQFFVGDCVDLLIRD 292
IY D +LL P+ GKL T + L+F GD V ++ D
Sbjct: 58 IYGEDKILLKPRSGKLGLGTAYIHGLKFATGDFVIIMDAD 97
>SPCC1223.08c |dfr1||dihydrofolate reductase
Dfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 461
Score = 27.9 bits (59), Expect = 1.3
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 293 STSIKTLKMQFTIQTN--YDKLQNLIDKHLDSIDNCLRPLVNEILDEEPNPDDEAQTKKL 466
S +K L + IQ+ + K + K+L P + DEE +P+DE + K+L
Sbjct: 2 SKPLKVLCLHGWIQSGPVFSKKMGSVQKYLSKYAELHFPTGPVVADEEADPNDEEEKKRL 61
>SPAC31G5.08 |ups1|ups|uroporphyrinogen-III synthase
Ups1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 251
Score = 27.5 bits (58), Expect = 1.7
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 287 RDSTSIKTLKMQFTIQTNY-DKLQNLIDKHLDSIDNCLRPLVNEILDEEPNPDDEAQTKK 463
RD+ I L+ + + DKL+N+ + I R V+E LDE +DE + +K
Sbjct: 26 RDTAFIPVLRHKRVHEEQLRDKLKNVRKTYCGLIVTSQR--VSETLDEALKQEDETERQK 83
Query: 464 LFRKISIFII 493
+ + IF +
Sbjct: 84 ILMETPIFTV 93
>SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1185
Score = 27.5 bits (58), Expect = 1.7
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = -1
Query: 609 FLGKATNIFKSFQEKTLSKAAIPSFNVIITPGLPRPLASMINMDIFLNNF 460
F+G + + S +KT ++A V + PG P P+ + F+ +
Sbjct: 136 FVGPSPEVIDSLGDKTKARAIAIRCGVPVVPGTPGPVEHYEEAEAFVKEY 185
>SPAC6C3.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 269
Score = 27.1 bits (57), Expect = 2.2
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +2
Query: 281 LIRDSTSIKTLKMQFTIQTNYDKLQNLIDKHLDSIDNCLRPLVNEILDEEPNPDDEAQTK 460
L + S L + F+ +Y+K++NLI K L ID+ L L+N ++ + + +
Sbjct: 121 LSKPEESYNFLTIYFSTLLSYEKVENLIKKSLTVIDS-LYGLLNYQINAQHSLGCIPLNQ 179
Query: 461 KLFRKISIFIIL 496
F+++ + I +
Sbjct: 180 DSFKQLKLLICI 191
>SPCC320.05 |||sulphate transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 667
Score = 27.1 bits (57), Expect = 2.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 603 GKATNIFKSFQEKTLSKAAIPSFNVIITPGLPRPLASMINM 481
G I ++ ++ LSKA +P I+ GL +A +IN+
Sbjct: 137 GMCLLIAENIHQRVLSKADVPQETAILVTGLIAFIAGIINL 177
>SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 990
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/67 (22%), Positives = 33/67 (49%)
Frame = +2
Query: 221 FTKTINRNNLQFFVGDCVDLLIRDSTSIKTLKMQFTIQTNYDKLQNLIDKHLDSIDNCLR 400
F +T+ + Q + ++LL + +++ QF I + +L++ H D ++
Sbjct: 833 FLETMYPDFTQLILNRAINLLGKPERLLESAAGQFIISFITSEKSDLLNTHTDFVNAIRS 892
Query: 401 PLVNEIL 421
PL+ +IL
Sbjct: 893 PLIAKIL 899
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 3.0
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 299 SIKTLKMQFTIQTNYDKLQNLIDKHLDSIDNCLRPLVNEILDEEPNP 439
S T K F Y+ L++ I K+ + +PL+NE++ EEP P
Sbjct: 60 SENTPKNTFESTQTYENLES-ISKN-EPTSEASKPLLNELVPEEPLP 104
>SPAC23D3.13c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1616
Score = 26.2 bits (55), Expect = 3.9
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 324 NCIFNVLIDVLSRIS 280
NC+ N+L+DV SR+S
Sbjct: 828 NCLANILVDVASRLS 842
>SPBC29B5.02c |isp4||OPT oligopeptide transporter family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 785
Score = 26.2 bits (55), Expect = 3.9
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -1
Query: 630 SVGLVFSFLGKATNIFKSFQEKTLSKAAIPS 538
++GL++S +G A N+F S + T++ + + S
Sbjct: 96 TIGLIYSTVGAAVNMFFSLRNPTVTLSVLIS 126
>SPBC14F5.12c |cbh2||centromere binding protein
Cbh2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 456 RRSCSGKYPYLSYSLVVWVTQ 518
RR+ GKYP L +L+ W T+
Sbjct: 72 RRNRQGKYPILENALIDWQTR 92
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 287 RDSTSIKTLKMQFTIQTN-YDKLQNLIDKHLDSIDNCL 397
+ +T ++ L+ T+ T +DKL NL+ +L NC+
Sbjct: 1480 QSTTLVEALRSLVTLLTRRFDKLHNLLKGYLWLFSNCI 1517
>SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1155
Score = 25.8 bits (54), Expect = 5.2
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 257 FVGDCVDLLIRDSTSIKT-LKMQFTIQTNYDKLQNLIDKHLDSIDNC 394
F+GD + ++S T L QF QTN L +LID + C
Sbjct: 32 FLGDFSGFNVLSNSSANTDLSSQFFEQTNNGSLSSLIDTSYSNSQIC 78
>SPBC119.01 |rpn3|SPBPJ4664.07|19S proteasome regulatory subunit
Rpn3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 497
Score = 25.8 bits (54), Expect = 5.2
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 338 NYDKLQNLIDKHLDSIDNCLRPLVNEILDEEPNPDDEA 451
N D L LI K+ S DN L+ + E++D N DD +
Sbjct: 74 NADVLGQLIKKYY-SFDNSLKNELLELIDMPQNGDDSS 110
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -1
Query: 615 FSFLGKATNIFKSFQEKTLSKAAIPSFNVIITPGLPRP 502
F++ ATN Q + +A+P +TPGL P
Sbjct: 401 FNYSFNATNPQSILQRPATTSSAVPQLPKSVTPGLAYP 438
>SPBC1718.06 |msp1|mgm1|mitochondrial GTPase
Msp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 903
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/74 (17%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +2
Query: 260 VGDCVDLLIRDST-SIKTLKMQFTIQTNYDKLQNLIDKHLDSIDNCLRPLVNEI-LDEEP 433
+ C+D + + S + MQ+ + D L+ + ++NC++P ++ ++++
Sbjct: 654 ISKCIDEITKASPFADHPAAMQYIMNAAQDILRRRFHATSEQVENCVKPYKYDVEVNDDE 713
Query: 434 NPDDEAQTKKLFRK 475
Q +KL ++
Sbjct: 714 WKSSRGQAEKLLQR 727
>SPAC806.08c |mod21||gamma tubulin complex subunit
Mod21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 618
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -1
Query: 330 IVNCIFNVLIDVLSRISRSTQSPTKNCKLFLFIVFVNNF 214
+++C+ N +++ ++ + TKNC LF F V F
Sbjct: 267 LLSCLKNTHQELI-KLETEVYNATKNCTLFQFFQHVKKF 304
>SPCC584.12 |mug42||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 115
Score = 25.0 bits (52), Expect = 9.0
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 145 KCGRGSR--FRHILNRFITVESEIREIVHENYKQKQFTVL 258
+CG+G + F+ ++ + + R ++H N K KQF ++
Sbjct: 29 RCGKGIKCFFKPSDQVYLVGQVDCRFLLHHNAKNKQFPLI 68
>SPBC18H10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 432
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 107 NIANEVARECQSQNVAVDPDFVIYLIDLL 193
N+ N ECQ + +AVD + + LL
Sbjct: 253 NLWNYFVLECQKKGIAVDESLICSFVKLL 281
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,609,012
Number of Sequences: 5004
Number of extensions: 53870
Number of successful extensions: 212
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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