Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16h23
         (630 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033514-13|CAA22100.1|  721|Caenorhabditis elegans Hypothetical...    30   1.6  
AL031627-19|CAA20969.1|  349|Caenorhabditis elegans Hypothetical...    29   2.7  
AC087081-2|AAK66036.1|  336|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z50006-6|CAA90298.1|  334|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AC024792-2|AAF60680.2|  813|Caenorhabditis elegans Hypothetical ...    29   3.6  
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical pr...    28   4.8  
U88176-3|AAB42284.1|  210|Caenorhabditis elegans Hypothetical pr...    28   4.8  
U80027-15|AAC48116.2|  194|Caenorhabditis elegans Hypothetical p...    27   8.4  
AF047655-6|AAC04398.1|  195|Caenorhabditis elegans Hypothetical ...    27   8.4  

>AL033514-13|CAA22100.1|  721|Caenorhabditis elegans Hypothetical
           protein Y75B8A.12 protein.
          Length = 721

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = +2

Query: 257 FVGDCVDLL--IRDSTSIKTLKMQFTIQTNYDKLQNLIDKHLDSIDNCLRPLVNEILDEE 430
           F  DC+  +  IRD  S +T+KMQ  ++   +  Q+ ++  L  ID    P +  +L+ E
Sbjct: 566 FRSDCMTTICIIRDKVSEQTMKMQIRVEVACELNQDSVNHCLKLID----PKITSMLNIE 621

Query: 431 PNPDDEAQTKKL 466
            N    A  K+L
Sbjct: 622 KNKLYAAALKEL 633


>AL031627-19|CAA20969.1|  349|Caenorhabditis elegans Hypothetical
           protein Y102A5C.31 protein.
          Length = 349

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 19/63 (30%), Positives = 32/63 (50%)
 Frame = +2

Query: 134 CQSQNVAVDPDFVIYLIDLLLLNPKYGKLFTKTINRNNLQFFVGDCVDLLIRDSTSIKTL 313
           C  +++  DPDF ++L + +L    YG L    I+   + +FV   + L    + S KT 
Sbjct: 175 CVPESIIDDPDFHLWLEEPMLYAIHYG-LTALVISLEVIYYFVHTALFLSSTKAKSQKTH 233

Query: 314 KMQ 322
           K+Q
Sbjct: 234 KLQ 236


>AC087081-2|AAK66036.1|  336|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.12 protein.
          Length = 336

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +2

Query: 326 TIQTNYDKLQNLID--KHLDSIDNCLRPLVNE 415
           T     DK    ID  K +DS  +C+RP+VNE
Sbjct: 71  TCDLTVDKTSQKIDIPKLMDSFQDCIRPIVNE 102


>Z50006-6|CAA90298.1|  334|Caenorhabditis elegans Hypothetical
           protein T07C5.5 protein.
          Length = 334

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
 Frame = -1

Query: 387 SMESKCLSMRFCSLS*LV*IVNCIF-NVLIDVLSRISRSTQSPTKNCKLFLFIVFVNNFP 211
           S ES+C   RFC     + IV  IF + + D  + I++     TK   +FL      +  
Sbjct: 57  SGESQC---RFCRFHKCI-IVGMIFLDAVDDPTNIINKLLVMDTKRRDIFLNCTIPESLT 112

Query: 210 YFGFNSNKSIKYMT-KSGSTATFCDWHSL-ATSLAMFFTTFSLQAIVNIQIEILIF-FNH 40
                S +S  +   K G+   FCDW  +   S   F         ++ Q  I IF ++H
Sbjct: 113 VDEVFSRRSFPFEPRKPGTVFNFCDWGVINHLSCISFIRQLDFIKFLSSQDTIAIFKYSH 172

Query: 39  IKF 31
           + +
Sbjct: 173 LMY 175


>AC024792-2|AAF60680.2|  813|Caenorhabditis elegans Hypothetical
           protein Y48G1A.4 protein.
          Length = 813

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 305 KTLKMQFTIQTNYDKLQNLIDKHLDSIDNCLRPLV 409
           +TL   F +  NY K   L++KH +S+D  L  LV
Sbjct: 380 ETLPFVFEMPKNYKKFCALLEKHSESMDLVLERLV 414


>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical protein
            F09C3.1 protein.
          Length = 1391

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 356  NLIDKHLDSIDNCLRPLVNEILDEEPN 436
            +LIDKHL ++  CLR   + I +E  N
Sbjct: 1076 SLIDKHLQTVIECLRKNKSTITEESEN 1102


>Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical
           protein T23D8.9a protein.
          Length = 811

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
 Frame = +2

Query: 176 YLIDLLLLNPKYGKLFTKTINRNNLQFFVGDCVDLLIRDSTSIKTLKMQFTIQTNYDKLQ 355
           +L+ L+ ++P    +++ T   +N+        D+ IR +     + +  TI + Y +L 
Sbjct: 507 FLLRLIEIHPDDEVIYSGTGFLSNVVAHKQHVKDIAIRSNA----IFLLHTIISKYPRLD 562

Query: 356 NLID-----KHLDSIDNCLRPLVNEILDEEPNPDDEAQT 457
            L D     +  + I NCLR L N ++   P P+ E +T
Sbjct: 563 ELTDAPKRNRVCEIICNCLRTLNNFLMMWIPTPNGETKT 601


>U88176-3|AAB42284.1|  210|Caenorhabditis elegans Hypothetical
           protein F18F11.1 protein.
          Length = 210

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 141 DWHSLATSLAMFFTTFSLQAIVNIQIEILI 52
           +WHS A +L M +  F     VN+QI + +
Sbjct: 104 EWHSFAAALVMGYYVFGENNAVNMQINLYL 133


>U80027-15|AAC48116.2|  194|Caenorhabditis elegans Hypothetical
           protein T28A11.5 protein.
          Length = 194

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 344 DKLQNLIDKHLDSIDNCLRPLVNEILDEE 430
           DKL + + K++   DNC++ LV+E   EE
Sbjct: 143 DKLPDELCKNMVGKDNCMKKLVSETCGEE 171


>AF047655-6|AAC04398.1|  195|Caenorhabditis elegans Hypothetical
           protein C17B7.4 protein.
          Length = 195

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 344 DKLQNLIDKHLDSIDNCLRPLVNEILDEE 430
           DKL + + K++   DNC++ LV+E   EE
Sbjct: 144 DKLPDELCKNMVGKDNCMKKLVSETCGEE 172


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,341,875
Number of Sequences: 27780
Number of extensions: 301550
Number of successful extensions: 962
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)