Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16h20
(669 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457117-1|CAG33398.1| 251|Homo sapiens MRPL16 protein. 149 9e-36
BC019269-1|AAH19269.1| 251|Homo sapiens mitochondrial ribosomal... 149 9e-36
BC001040-1|AAH01040.1| 251|Homo sapiens mitochondrial ribosomal... 149 9e-36
AK000491-1|BAA91202.1| 251|Homo sapiens protein ( Homo sapiens ... 149 9e-36
AF183428-1|AAG09697.1| 251|Homo sapiens 28.4 kDa protein protein. 149 9e-36
AB049642-1|BAB40847.1| 251|Homo sapiens mitochondrial ribosomal... 149 9e-36
U77494-1|AAB67052.1| 1037|Homo sapiens RANBP8 protein. 30 8.6
>CR457117-1|CAG33398.1| 251|Homo sapiens MRPL16 protein.
Length = 251
Score = 149 bits (361), Expect = 9e-36
Identities = 74/192 (38%), Positives = 109/192 (56%)
Frame = +3
Query: 93 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 272
A L AG+K P +++ + IPE+ +LR ++ P P + PK L +RGP
Sbjct: 22 ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78
Query: 273 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXX 452
T + + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT
Sbjct: 79 ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGH 138
Query: 453 XXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQK 632
AIDHYVTP+K+GR+++E+GG+CE+ EV L ++ +LPF A+ VS LE+
Sbjct: 139 RMGGGKGAIDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKM 198
Query: 633 AAEEKWLEENNQ 668
+++ E NNQ
Sbjct: 199 RKDQEERERNNQ 210
>BC019269-1|AAH19269.1| 251|Homo sapiens mitochondrial ribosomal
protein L16 protein.
Length = 251
Score = 149 bits (361), Expect = 9e-36
Identities = 74/192 (38%), Positives = 109/192 (56%)
Frame = +3
Query: 93 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 272
A L AG+K P +++ + IPE+ +LR ++ P P + PK L +RGP
Sbjct: 22 ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78
Query: 273 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXX 452
T + + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT
Sbjct: 79 ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGH 138
Query: 453 XXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQK 632
AIDHYVTP+K+GR+++E+GG+CE+ EV L ++ +LPF A+ VS LE+
Sbjct: 139 RMGGGKGAIDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKM 198
Query: 633 AAEEKWLEENNQ 668
+++ E NNQ
Sbjct: 199 RKDQEERERNNQ 210
>BC001040-1|AAH01040.1| 251|Homo sapiens mitochondrial ribosomal
protein L16 protein.
Length = 251
Score = 149 bits (361), Expect = 9e-36
Identities = 74/192 (38%), Positives = 109/192 (56%)
Frame = +3
Query: 93 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 272
A L AG+K P +++ + IPE+ +LR ++ P P + PK L +RGP
Sbjct: 22 ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78
Query: 273 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXX 452
T + + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT
Sbjct: 79 ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGH 138
Query: 453 XXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQK 632
AIDHYVTP+K+GR+++E+GG+CE+ EV L ++ +LPF A+ VS LE+
Sbjct: 139 RMGGGKGAIDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKM 198
Query: 633 AAEEKWLEENNQ 668
+++ E NNQ
Sbjct: 199 RKDQEERERNNQ 210
>AK000491-1|BAA91202.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ20484 fis, clone KAT07770. ).
Length = 251
Score = 149 bits (361), Expect = 9e-36
Identities = 74/192 (38%), Positives = 109/192 (56%)
Frame = +3
Query: 93 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 272
A L AG+K P +++ + IPE+ +LR ++ P P + PK L +RGP
Sbjct: 22 ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78
Query: 273 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXX 452
T + + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT
Sbjct: 79 ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGH 138
Query: 453 XXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQK 632
AIDHYVTP+K+GR+++E+GG+CE+ EV L ++ +LPF A+ VS LE+
Sbjct: 139 RMGGGKGAIDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKM 198
Query: 633 AAEEKWLEENNQ 668
+++ E NNQ
Sbjct: 199 RKDQEERERNNQ 210
>AF183428-1|AAG09697.1| 251|Homo sapiens 28.4 kDa protein protein.
Length = 251
Score = 149 bits (361), Expect = 9e-36
Identities = 74/192 (38%), Positives = 109/192 (56%)
Frame = +3
Query: 93 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 272
A L AG+K P +++ + IPE+ +LR ++ P P + PK L +RGP
Sbjct: 22 ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78
Query: 273 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXX 452
T + + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT
Sbjct: 79 ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGH 138
Query: 453 XXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQK 632
AIDHYVTP+K+GR+++E+GG+CE+ EV L ++ +LPF A+ VS LE+
Sbjct: 139 RMGGGKGAIDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKM 198
Query: 633 AAEEKWLEENNQ 668
+++ E NNQ
Sbjct: 199 RKDQEERERNNQ 210
>AB049642-1|BAB40847.1| 251|Homo sapiens mitochondrial ribosomal
protein L16 (L16mt) protein.
Length = 251
Score = 149 bits (361), Expect = 9e-36
Identities = 74/192 (38%), Positives = 109/192 (56%)
Frame = +3
Query: 93 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 272
A L AG+K P +++ + IPE+ +LR ++ P P + PK L +RGP
Sbjct: 22 ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78
Query: 273 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXX 452
T + + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT
Sbjct: 79 ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGH 138
Query: 453 XXXXXXXAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQK 632
AIDHYVTP+K+GR+++E+GG+CE+ EV L ++ +LPF A+ VS LE+
Sbjct: 139 RMGGGKGAIDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKM 198
Query: 633 AAEEKWLEENNQ 668
+++ E NNQ
Sbjct: 199 RKDQEERERNNQ 210
>U77494-1|AAB67052.1| 1037|Homo sapiens RANBP8 protein.
Length = 1037
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +3
Query: 147 DHIEIPERQRLRVYDK--VPQYPPNLKPP 227
DH+E P RQ +Y K V QY P+ +PP
Sbjct: 46 DHVEFPVRQAAAIYLKNMVTQYWPDREPP 74
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,712,435
Number of Sequences: 237096
Number of extensions: 2314675
Number of successful extensions: 5004
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4995
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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