Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16h09
         (684 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058727-1|AAL13956.1|  540|Drosophila melanogaster LD47264p pro...    83   5e-16
AE014298-829|AAF46110.1|  540|Drosophila melanogaster CG5966-PA ...    83   5e-16

>AY058727-1|AAL13956.1|  540|Drosophila melanogaster LD47264p
           protein.
          Length = 540

 Score = 82.6 bits (195), Expect = 5e-16
 Identities = 42/144 (29%), Positives = 77/144 (53%), Gaps = 9/144 (6%)
 Frame = +3

Query: 99  VHYKVVLKVANSTESKNHGPESGKVTITLVDRNNNK--------TDRRSLNPEQKYYKPG 254
           +HY++ ++V+   ES  HG E G ++I L D    K        T+    + +  Y++PG
Sbjct: 397 LHYRITVRVSGHDESTLHGGEVGILSIQLHDALVKKAGKNERAATEMMKFSQKAMYFEPG 456

Query: 255 EIETKMLAFQDAGNPPLYVIVEWKYEASLFNPMTWRLIKSPSIFIEYIKLSSIE-YNTEI 431
             E K L        P Y  V W+Y  ++ NP+TWR++ +P I++EYI + ++E  +  +
Sbjct: 457 -YEYKALVAGRNLREPEYATVNWEYPTNILNPLTWRILSAPRIYLEYILIEAMESSDLYL 515

Query: 432 TVCPKMKKPVVNNLPTVMKTKYCK 503
            +CP+ +  ++     V+++ YCK
Sbjct: 516 KLCPQHEGAILTGAENVLRSSYCK 539


>AE014298-829|AAF46110.1|  540|Drosophila melanogaster CG5966-PA
           protein.
          Length = 540

 Score = 82.6 bits (195), Expect = 5e-16
 Identities = 42/144 (29%), Positives = 77/144 (53%), Gaps = 9/144 (6%)
 Frame = +3

Query: 99  VHYKVVLKVANSTESKNHGPESGKVTITLVDRNNNK--------TDRRSLNPEQKYYKPG 254
           +HY++ ++V+   ES  HG E G ++I L D    K        T+    + +  Y++PG
Sbjct: 397 LHYRITVRVSGHDESTLHGGEVGILSIQLHDALVKKAGKNERAATEMMKFSQKAMYFEPG 456

Query: 255 EIETKMLAFQDAGNPPLYVIVEWKYEASLFNPMTWRLIKSPSIFIEYIKLSSIE-YNTEI 431
             E K L        P Y  V W+Y  ++ NP+TWR++ +P I++EYI + ++E  +  +
Sbjct: 457 -YEYKALVAGRNLREPEYATVNWEYPTNILNPLTWRILSAPRIYLEYILIEAMESSDLYL 515

Query: 432 TVCPKMKKPVVNNLPTVMKTKYCK 503
            +CP+ +  ++     V+++ YCK
Sbjct: 516 KLCPQHEGAILTGAENVLRSSYCK 539


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,677,937
Number of Sequences: 53049
Number of extensions: 591345
Number of successful extensions: 1744
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1740
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)