Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16h09
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83113-8|CAB05549.1| 340|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z81042-6|CAB02797.1| 340|Caenorhabditis elegans Hypothetical pr... 32 0.44
U41021-3|AAV28352.1| 317|Caenorhabditis elegans Mechanosensory ... 31 0.58
U41021-2|AAM54192.1| 392|Caenorhabditis elegans Mechanosensory ... 31 0.58
U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory ... 31 0.58
U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein. 31 0.58
U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein. 31 0.58
Z83219-2|CAB05695.1| 377|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81125-5|CAB03381.2| 398|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF408760-1|AAO27839.1| 318|Caenorhabditis elegans unknown prote... 30 1.8
AF045638-5|AAC02562.3| 544|Caenorhabditis elegans Hypothetical ... 29 3.1
Z81567-5|CAB04588.2| 154|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical pr... 27 9.4
U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein. 27 9.4
U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein. 27 9.4
>Z83113-8|CAB05549.1| 340|Caenorhabditis elegans Hypothetical
protein C27H6.8 protein.
Length = 340
Score = 31.9 bits (69), Expect = 0.44
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +2
Query: 323 EVRSLIIQPNDVEINKIPKYFHRIYKTFVDRIQY*NNGMPKNEKTCRQQSANGHENEILQ 502
EV + I+ N V + I ++HR+Y+ FV+ I +NG+ + + R S+ + Q
Sbjct: 99 EVINQILGGN-VSSSMIDLFYHRLYEQFVESIDAIDNGISQYDGVPRYHSSGNLSSRTGQ 157
Query: 503 VLRKLNEPHYNSN 541
NEP +++
Sbjct: 158 FNSHWNEPENDAD 170
>Z81042-6|CAB02797.1| 340|Caenorhabditis elegans Hypothetical
protein C27H6.8 protein.
Length = 340
Score = 31.9 bits (69), Expect = 0.44
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +2
Query: 323 EVRSLIIQPNDVEINKIPKYFHRIYKTFVDRIQY*NNGMPKNEKTCRQQSANGHENEILQ 502
EV + I+ N V + I ++HR+Y+ FV+ I +NG+ + + R S+ + Q
Sbjct: 99 EVINQILGGN-VSSSMIDLFYHRLYEQFVESIDAIDNGISQYDGVPRYHSSGNLSSRTGQ 157
Query: 503 VLRKLNEPHYNSN 541
NEP +++
Sbjct: 158 FNSHWNEPENDAD 170
>U41021-3|AAV28352.1| 317|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform c protein.
Length = 317
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 547 C*FIKSTKSILLVFYQLDLSTCWIFELLRKLIRNLIFRL 663
C +I + S LL+F+ L +S C +++++ R +IFRL
Sbjct: 42 CGWILTILSYLLIFFTLPISACMCIKVVQEYERAVIFRL 80
>U41021-2|AAM54192.1| 392|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform b protein.
Length = 392
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 547 C*FIKSTKSILLVFYQLDLSTCWIFELLRKLIRNLIFRL 663
C +I + S LL+F+ L +S C +++++ R +IFRL
Sbjct: 117 CGWILTILSYLLIFFTLPISACMCIKVVQEYERAVIFRL 155
>U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform a protein.
Length = 481
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 547 C*FIKSTKSILLVFYQLDLSTCWIFELLRKLIRNLIFRL 663
C +I + S LL+F+ L +S C +++++ R +IFRL
Sbjct: 117 CGWILTILSYLLIFFTLPISACMCIKVVQEYERAVIFRL 155
>U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 547 C*FIKSTKSILLVFYQLDLSTCWIFELLRKLIRNLIFRL 663
C +I + S LL+F+ L +S C +++++ R +IFRL
Sbjct: 117 CGWILTILSYLLIFFTLPISACMCIKVVQEYERAVIFRL 155
>U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 547 C*FIKSTKSILLVFYQLDLSTCWIFELLRKLIRNLIFRL 663
C +I + S LL+F+ L +S C +++++ R +IFRL
Sbjct: 117 CGWILTILSYLLIFFTLPISACMCIKVVQEYERAVIFRL 155
>Z83219-2|CAB05695.1| 377|Caenorhabditis elegans Hypothetical
protein C31C9.3 protein.
Length = 377
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +3
Query: 360 RLIKSPSIFIEYIKLSSIEYNTEITVCPKMKKPVV-NNLPTVMKTKY 497
R++KSP + +E ++L +E+N E T C + V+ N+ P V+ ++
Sbjct: 180 RVLKSPKLKLEKLRLDFLEHNKEDTQCMEELLTVLENSEPHVLNIEF 226
>Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical
protein ZC504.3 protein.
Length = 668
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +3
Query: 120 KVANSTESKNHGPESGKVTITLVDRNNNKTDRRSLNPEQKYYKPGEI----ETKMLAFQD 287
K + +++ NH P+ GK+ ++D N K ++ + E P E+ E F D
Sbjct: 129 KSSRKSQTPNHLPDDGKLFDRILDPNYKKKEKTVMEVEDVEMSPVEMLDEEEVSTFTFDD 188
Query: 288 AGNP 299
A P
Sbjct: 189 ACGP 192
>Z81125-5|CAB03381.2| 398|Caenorhabditis elegans Hypothetical
protein T22A3.3a protein.
Length = 398
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +3
Query: 114 VLKVANSTESKNHGPESGKVTITLVDRNNNKTDRRSLNPEQKYYKPGEIETKMLAFQDAG 293
VL +S+ + G S K+ +T +++N R++ P+Q++Y + T + + +G
Sbjct: 132 VLSSLSSSPQQRSGLRSQKLHLTYIEKNKRV---RAMIPQQQHYHAFDRPTHYNSRKTSG 188
Query: 294 NPPL 305
PPL
Sbjct: 189 PPPL 192
>AF408760-1|AAO27839.1| 318|Caenorhabditis elegans unknown protein
protein.
Length = 318
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +3
Query: 114 VLKVANSTESKNHGPESGKVTITLVDRNNNKTDRRSLNPEQKYYKPGEIETKMLAFQDAG 293
VL +S+ + G S K+ +T +++N R++ P+Q++Y + T + + +G
Sbjct: 52 VLSSLSSSPQQRSGLRSQKLHLTYIEKNKRV---RAMIPQQQHYHAFDRPTHYNSRKTSG 108
Query: 294 NPPL 305
PPL
Sbjct: 109 PPPL 112
>AF045638-5|AAC02562.3| 544|Caenorhabditis elegans Hypothetical
protein C35B1.2a protein.
Length = 544
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/62 (19%), Positives = 27/62 (43%)
Frame = +3
Query: 270 MLAFQDAGNPPLYVIVEWKYEASLFNPMTWRLIKSPSIFIEYIKLSSIEYNTEITVCPKM 449
++ ++ G P + E + E F MTW+ +P + + +YN+ + +
Sbjct: 251 VICYEWMGQPHPLTVYEDQTEKQAFEQMTWKKCSNPEDQVPILARHGCDYNSAVAILLSS 310
Query: 450 KK 455
+K
Sbjct: 311 EK 312
>Z81567-5|CAB04588.2| 154|Caenorhabditis elegans Hypothetical
protein K08C9.7 protein.
Length = 154
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 153 GPESGKVTITLVDRNNNKTDRRSLNPEQKYYKPGE 257
G + K + ++ + NN + R+S +P KY+K E
Sbjct: 83 GAKKRKKKVYIIPKKNNISQRKSSSPSPKYFKIDE 117
>Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical
protein F58A3.1c protein.
Length = 629
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 371 IPKYFHRIYKTFVDRIQY*NNGMPKNEKTCRQQSANGHENE-ILQVLR 511
IPK+F I+ + + +QY G P E T S +ENE +LQ+ R
Sbjct: 165 IPKFFRSIFDSGMRELQYVLRG-PSRECTLANGS-QAYENENVLQITR 210
>Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical
protein F58A3.1b protein.
Length = 578
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 371 IPKYFHRIYKTFVDRIQY*NNGMPKNEKTCRQQSANGHENE-ILQVLR 511
IPK+F I+ + + +QY G P E T S +ENE +LQ+ R
Sbjct: 114 IPKFFRSIFDSGMRELQYVLRG-PSRECTLANGS-QAYENENVLQITR 159
>Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical
protein F58A3.1a protein.
Length = 592
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 371 IPKYFHRIYKTFVDRIQY*NNGMPKNEKTCRQQSANGHENE-ILQVLR 511
IPK+F I+ + + +QY G P E T S +ENE +LQ+ R
Sbjct: 128 IPKFFRSIFDSGMRELQYVLRG-PSRECTLANGS-QAYENENVLQITR 173
>U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein.
Length = 579
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 371 IPKYFHRIYKTFVDRIQY*NNGMPKNEKTCRQQSANGHENE-ILQVLR 511
IPK+F I+ + + +QY G P E T S +ENE +LQ+ R
Sbjct: 115 IPKFFRSIFDSGMRELQYVLRG-PSRECTLANGS-QAYENENVLQITR 160
>U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein.
Length = 592
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 371 IPKYFHRIYKTFVDRIQY*NNGMPKNEKTCRQQSANGHENE-ILQVLR 511
IPK+F I+ + + +QY G P E T S +ENE +LQ+ R
Sbjct: 128 IPKFFRSIFDSGMRELQYVLRG-PSRECTLANGS-QAYENENVLQITR 173
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,865,132
Number of Sequences: 27780
Number of extensions: 329361
Number of successful extensions: 962
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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