Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16h05
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1551|AAN11977.1|  215|Drosophila melanogaster CG5021-PB...   187   1e-47
AE014296-1550|AAF50344.2|  218|Drosophila melanogaster CG5021-PA...   181   9e-46
AY071297-1|AAL48919.1|  223|Drosophila melanogaster RE32705p pro...   175   4e-44

>AE014296-1551|AAN11977.1|  215|Drosophila melanogaster CG5021-PB,
           isoform B protein.
          Length = 215

 Score =  187 bits (455), Expect = 1e-47
 Identities = 83/116 (71%), Positives = 96/116 (82%), Gaps = 6/116 (5%)
 Frame = +3

Query: 324 MNSATVPLLDDDTIAFGEEDN------ANKQFVHPYIVFFHLVFRCSAIIVYILCGWFSD 485
           M SATVPLLDDDTI FGEED       A +++ HPY+ FFHL FR +AI++Y+ CGWFSD
Sbjct: 1   MASATVPLLDDDTIPFGEEDEMRDPSRAGQKYTHPYVTFFHLFFRGAAILIYMFCGWFSD 60

Query: 486 SFIASFVLVILLLSADFWTVKNISGRLLVGLRWWNYVDDNGKSHWVFEARQSRVNR 653
           SFI SFV V+L LSADFWTVKNISGRLLVGLRWWNYVDD+G SHWVFE++ SRVN+
Sbjct: 61  SFITSFVFVVLFLSADFWTVKNISGRLLVGLRWWNYVDDDGVSHWVFESKNSRVNK 116


>AE014296-1550|AAF50344.2|  218|Drosophila melanogaster CG5021-PA,
           isoform A protein.
          Length = 218

 Score =  181 bits (440), Expect = 9e-46
 Identities = 83/119 (69%), Positives = 96/119 (80%), Gaps = 9/119 (7%)
 Frame = +3

Query: 324 MNSATV---PLLDDDTIAFGEEDN------ANKQFVHPYIVFFHLVFRCSAIIVYILCGW 476
           M SATV   PLLDDDTI FGEED       A +++ HPY+ FFHL FR +AI++Y+ CGW
Sbjct: 1   MASATVRNVPLLDDDTIPFGEEDEMRDPSRAGQKYTHPYVTFFHLFFRGAAILIYMFCGW 60

Query: 477 FSDSFIASFVLVILLLSADFWTVKNISGRLLVGLRWWNYVDDNGKSHWVFEARQSRVNR 653
           FSDSFI SFV V+L LSADFWTVKNISGRLLVGLRWWNYVDD+G SHWVFE++ SRVN+
Sbjct: 61  FSDSFITSFVFVVLFLSADFWTVKNISGRLLVGLRWWNYVDDDGVSHWVFESKNSRVNK 119


>AY071297-1|AAL48919.1|  223|Drosophila melanogaster RE32705p
           protein.
          Length = 223

 Score =  175 bits (426), Expect = 4e-44
 Identities = 84/124 (67%), Positives = 97/124 (78%), Gaps = 14/124 (11%)
 Frame = +3

Query: 324 MNSATV---PLLDDDTIAFGEEDN------ANKQFVHPYIVFFHLVFRCSAIIVYILCGW 476
           M SATV   PLLDDDTI FGEED       A +++ HPY+ FFHL FR +AI++Y+ CGW
Sbjct: 1   MASATVRNVPLLDDDTIPFGEEDEMRDPSRAGQKYTHPYVTFFHLFFRGAAILIYMFCGW 60

Query: 477 FSDSFIASFVLVILLLSADFWTVKNISGRLLVGLRWWNYVDDNGKSHWVFEAR-----QS 641
           FSDSFI SFV V+L LSADFWTVKNISGRLLVGLRWWNYVDD+G SHWVFE++     QS
Sbjct: 61  FSDSFITSFVFVVLFLSADFWTVKNISGRLLVGLRWWNYVDDDGVSHWVFESKNSESYQS 120

Query: 642 RVNR 653
           RVN+
Sbjct: 121 RVNK 124


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,395,323
Number of Sequences: 53049
Number of extensions: 604285
Number of successful extensions: 1332
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)