Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16h05
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58755-12|ABJ99069.1|  205|Caenorhabditis elegans Hypothetical p...   104   5e-23
U58755-11|AAB00701.1|  247|Caenorhabditis elegans Hypothetical p...   104   5e-23
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    29   2.2  
AF038605-2|AAB92020.1|  698|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AC006708-15|AAF60425.1|  504|Caenorhabditis elegans Hypothetical...    28   5.0  
AC084156-4|AAK68488.2|  251|Caenorhabditis elegans Transforming ...    27   8.8  

>U58755-12|ABJ99069.1|  205|Caenorhabditis elegans Hypothetical
           protein C34D4.4b protein.
          Length = 205

 Score =  104 bits (250), Expect = 5e-23
 Identities = 43/80 (53%), Positives = 59/80 (73%)
 Frame = +3

Query: 393 KQFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVILLLSADFWTVKNISGRLLV 572
           + F  P IV  HL F+ +A+  Y    +F++SFI  F++++ LLS DFWTVKNI+GRLLV
Sbjct: 26  QMFGKPTIVLAHLSFKGAALFFYFFANFFTNSFIVQFLVILTLLSMDFWTVKNITGRLLV 85

Query: 573 GLRWWNYVDDNGKSHWVFEA 632
           GLRWWN+VD +G +HW FE+
Sbjct: 86  GLRWWNFVDADGNNHWKFES 105


>U58755-11|AAB00701.1|  247|Caenorhabditis elegans Hypothetical
           protein C34D4.4a protein.
          Length = 247

 Score =  104 bits (250), Expect = 5e-23
 Identities = 43/80 (53%), Positives = 59/80 (73%)
 Frame = +3

Query: 393 KQFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVILLLSADFWTVKNISGRLLV 572
           + F  P IV  HL F+ +A+  Y    +F++SFI  F++++ LLS DFWTVKNI+GRLLV
Sbjct: 68  QMFGKPTIVLAHLSFKGAALFFYFFANFFTNSFIVQFLVILTLLSMDFWTVKNITGRLLV 127

Query: 573 GLRWWNYVDDNGKSHWVFEA 632
           GLRWWN+VD +G +HW FE+
Sbjct: 128 GLRWWNFVDADGNNHWKFES 147


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +2

Query: 512  HSTAVCRLLDCQEY*WSVTSWTEVVELCGRQRQVALGVRGPSEPGQQ 652
            +S A C  + C  Y W+VT W++  + C R ++    V   S  G++
Sbjct: 1740 NSVANCFPVACPAYRWNVTPWSKCKDECARGQKQTRRVHCISTSGKR 1786


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +2

Query: 512  HSTAVCRLLDCQEY*WSVTSWTEVVELCGRQRQVALGVRGPSEPGQQ 652
            +S A C  + C  Y W+VT W++  + C R ++    V   S  G++
Sbjct: 1740 NSVANCFPVACPAYRWNVTPWSKCKDECARGQKQTRRVHCISTSGKR 1786


>AF038605-2|AAB92020.1|  698|Caenorhabditis elegans Hypothetical
           protein C02B10.5 protein.
          Length = 698

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = -1

Query: 577 SPTSNRPLIFLTVQKSADSSRMTNTKLAMNESENHPHRMYTIIAEHRNTRWKNTM 413
           +P SN  L     ++  +   M   K+  +E++N+P R   ++A   N R  NT+
Sbjct: 286 NPPSNASLKRRATEEFGNDGPMKQAKIEGSENDNNPMRKLEMMANSSNFRGGNTI 340


>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
           protein F53B6.2a protein.
          Length = 1045

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
 Frame = +2

Query: 440 MLCDNCVHPVWVVLRLIHCKLRISHSTAVCRLLDC-QEY*WSVTSWTEVVELCG---RQR 607
           ++C N +    V  +L   KLR       C +L C     W    WTE V  CG   R+R
Sbjct: 199 VVCVNAITGRVVPEKLCADKLRPKVEARPCPMLICPSRCRWMAADWTECVPHCGEGTRKR 258

Query: 608 QV 613
           +V
Sbjct: 259 EV 260


>AC006708-15|AAF60425.1|  504|Caenorhabditis elegans Hypothetical
           protein Y110A7A.8 protein.
          Length = 504

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -1

Query: 310 INNQYYLFHKFILNECQDR*IGIDELFQQQLNILN*IGIVGNPENSK 170
           I+N+  + HKF+ ++ + R   ++ L    L  L  + ++GN  NSK
Sbjct: 112 IDNEINVIHKFVRDKYEKRFPELETLVPNALTYLATVQLLGNEINSK 158


>AC084156-4|AAK68488.2|  251|Caenorhabditis elegans Transforming
           growth factor betafamily protein 3 protein.
          Length = 251

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = -1

Query: 295 YLFHKFILNECQDR*IGIDELFQQQLNILN*IGIVGNPENSKGHTHNPN 149
           +LFHK++  +  D+ I I+       N++N + ++ N  N       PN
Sbjct: 99  HLFHKWMKQKSSDKMIKIEITNSNTQNVINALSVLRNAPNFDVMVFQPN 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,119,815
Number of Sequences: 27780
Number of extensions: 317890
Number of successful extensions: 773
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)