Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16g19
         (631 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC530.09c |||cation dependent mannose-6-phosphate cargo recept...    28   1.3  
SPAC23A1.16c |||DUF408 family protein|Schizosaccharomyces pombe|...    26   5.2  
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce...    26   5.2  
SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|c...    25   6.8  
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||...    25   6.8  
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c...    25   6.8  
SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c...    25   6.8  

>SPBC530.09c |||cation dependent mannose-6-phosphate cargo receptor
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 296

 Score = 27.9 bits (59), Expect = 1.3
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 6/29 (20%)
 Frame = -1

Query: 448 FLLFCS------FVGGFV*QRFIINRQQL 380
           FLLFC+      FVGGFV QR ++N + L
Sbjct: 210 FLLFCAIAFLAYFVGGFVYQRVVLNARGL 238


>SPAC23A1.16c |||DUF408 family protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 197

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 392 INDKALLNKPANERTEQEKKYI 457
           +N K++L KP N ++ QEK+ I
Sbjct: 1   MNKKSILKKPKNAQSTQEKQLI 22


>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1957

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 293  LIEDSENYEGLENVKRRVQQAMRGKPKKKQLLSINDKAL 409
            L E S+NY+ LE    ++   ++    +KQLL   ++ L
Sbjct: 887  LAELSKNYDSLEQESAQLNSGLKSLEAEKQLLHTENEEL 925


>SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 488

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +2

Query: 311 NYEGLENVKRRVQQAMRGKPKKKQLLSINDKALLNKPANERTE 439
           N E   N +R   + +  KPKK  LLS N   LL K + +  E
Sbjct: 38  NIENFNNQERSDLEHIHSKPKKDSLLSWN--ILLKKGSYKENE 78


>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 710

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +2

Query: 338 RRVQQAMRGKPKKKQLLSINDKALLNKPANERTEQEKKYI 457
           RR+Q     KP  +Q    ++KAL  KP    T   +K I
Sbjct: 468 RRLQAFFANKPTSEQTAQQDNKALFVKPERSSTVTIRKPI 507


>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1142

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 466  NSIYVFFLLFCSFVGGFV*QRFIINRQQLFFLWL 365
            N++++F L F S + G      I N   L+F WL
Sbjct: 1073 NNVFLFLLSFYSLIYGAEKPYLIHNVVGLYFFWL 1106


>SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1316

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 542 YYGPCRTIVRQHQDAHALYFIVSG 613
           +Y    TIVRQ   A  LY+I+ G
Sbjct: 536 FYKKGTTIVRQGDHADGLYYIIDG 559


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,345,025
Number of Sequences: 5004
Number of extensions: 43842
Number of successful extensions: 106
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)