Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16g09
(694 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25B8.09 |||trans-aconitate 3-methyltransferase |Schizosaccha... 31 0.21
SPAC25B8.10 |||trans-aconitate 3-methyltransferase |Schizosaccha... 31 0.21
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 29 0.48
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 2.6
SPCC4G3.04c |coq5||C-methytransferase |Schizosaccharomyces pombe... 27 2.6
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 26 4.5
SPBC1734.02c |cdc27|SPBC337.18c|DNA polymerase delta subunit Cdc... 26 4.5
SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subuni... 26 4.5
SPBC36.01c |||spermidine family transporter |Schizosaccharomyces... 26 5.9
SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3... 26 5.9
SPCC4G3.11 |mug154||conserved fungal protein|Schizosaccharomyces... 26 5.9
SPCC74.02c |||mRNA cleavage and polyadenylation specificity fact... 25 7.9
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 25 7.9
>SPAC25B8.09 |||trans-aconitate 3-methyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 251
Score = 30.7 bits (66), Expect = 0.21
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 572 LPDDSVDLLVSSLTFHWVNDLPGLFDRIMKCLKPDGVL 685
L D+SVDL+ FHW + L I + LKP+G L
Sbjct: 94 LEDESVDLVACGQCFHWFANEEAL-KEIYRVLKPNGKL 130
>SPAC25B8.10 |||trans-aconitate 3-methyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 256
Score = 30.7 bits (66), Expect = 0.21
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 572 LPDDSVDLLVSSLTFHWVNDLPGLFDRIMKCLKPDGVL 685
L D+SVDL++ + FHW + + I + LKP+G L
Sbjct: 98 LEDESVDLVLCAQCFHWFANEEAM-KEIYRVLKPNGKL 134
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 29.5 bits (63), Expect = 0.48
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 566 NFPHPLSSFHIERPHQLLPYRDEFWMCHTVSPS 468
N+P+PL + H+ L YRD+ + H V+PS
Sbjct: 249 NYPYPLDASHLSSQQLLSMYRDQ--VSHGVTPS 279
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 262 MNIFDRKTKMIQRERAACNDEYHLSEYVKEE--IGWRTADKIFDIKRTFKNAVEL 420
M I + K ++QR+ DE +SE +EE + + F++ K A+EL
Sbjct: 658 MEILNDKISVLQRQLTDVKDELDVSEEEREEAIVAGQKLSASFELMSNEKQALEL 712
>SPCC4G3.04c |coq5||C-methytransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 305
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 569 ELPDDSVDLLVSSLTFHWVNDLPGLFDRIMKCLKPDGV 682
++PD+S+D+ + +P + ++ + LKP GV
Sbjct: 179 KIPDNSIDMYTIAFGIRNCTHIPKVLEQAYRVLKPGGV 216
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 599 PADQRCRLVIQNFPHPLSSFH 537
P C LV+ NF HP SS +
Sbjct: 1007 PVISACELVVNNFLHPQSSLY 1027
>SPBC1734.02c |cdc27|SPBC337.18c|DNA polymerase delta subunit
Cdc27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -1
Query: 199 FVYLPVYFLHSIPIKNDVNLD 137
F+Y P+Y +H PI +++NL+
Sbjct: 48 FLY-PIYLIHGQPIDDEINLE 67
>SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subunit
Orc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 707
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 147 TSFFIGIECKKYTGRYTKHRSK*FV 221
+SF++G+ CK Y KH K +V
Sbjct: 77 SSFYLGVICKLYEKAIDKHSGKKYV 101
>SPBC36.01c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 580
Score = 25.8 bits (54), Expect = 5.9
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = -3
Query: 467 PRCPAGNAVIHPREAPSSTAFLNVLLMS--NILSAVRQPISSLTYSDKWYSSLQAALSLC 294
P C A + I R+ P ++ + L S I A Q I ++ +++ A + LC
Sbjct: 191 PICWAPMSEITGRKTP---LYIGLFLFSVFQIAVATAQDIQTIMIC-RFFGGYGACVPLC 246
Query: 293 IILVFLSNIFIVRYIELAVFCFAA 222
++ ++++ RY A+ FAA
Sbjct: 247 VVAAAFADMYPNRYRGTAITIFAA 270
>SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 260
Score = 25.8 bits (54), Expect = 5.9
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 569 ELPDDSVDLLVSSLTFHWVNDLPGLFDRIMK 661
E+P +S D++ S+ HW+ P +MK
Sbjct: 91 EIPSESFDVVFSNAALHWIMRQPKNRPIVMK 121
>SPCC4G3.11 |mug154||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 316
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 350 SLTYSDKWYSSLQAALSLCIILV-FLSNIFIVRY 252
S+ S W+ + + LS+C + + FL+ IF R+
Sbjct: 78 SINTSRSWFRAFLSFLSICFLFISFLNFIFSTRF 111
>SPCC74.02c |||mRNA cleavage and polyadenylation specificity factor
complex associated protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 710
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 428 EAPSSTAFLNVLLMSNILSAVRQPISS 348
E PSS + +NV +++ + S RQ ISS
Sbjct: 161 EVPSSKSDVNVQMLARLKSKSRQKISS 187
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 343 VKEEIGWRTADKIFDIKRTFKNAVELGASR 432
VKE I R + + D+ KNAV G +R
Sbjct: 315 VKESIELRPEEAVIDVDELDKNAVLFGGTR 344
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,679,445
Number of Sequences: 5004
Number of extensions: 53652
Number of successful extensions: 167
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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