Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16f19
         (607 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124214-1|BAC85808.1|  167|Homo sapiens protein ( Homo sapiens ...    36   0.11 
BC122550-1|AAI22551.1|  475|Homo sapiens VCP protein protein.          30   7.3  
BC121794-1|AAI21795.1|  806|Homo sapiens valosin-containing prot...    30   7.3  
BC110913-1|AAI10914.1|  806|Homo sapiens valosin-containing prot...    30   7.3  
BC007562-1|AAH07562.2|  644|Homo sapiens VCP protein protein.          30   7.3  
AL353795-2|CAH70993.1|  806|Homo sapiens valosin-containing prot...    30   7.3  
AF100752-1|AAD43016.1|  806|Homo sapiens transitional endoplasmi...    30   7.3  
AC004472-1|AAC07984.1|  806|Homo sapiens TERA_HUMAN protein.           30   7.3  

>AK124214-1|BAC85808.1|  167|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42220 fis, clone THYMU2038615. ).
          Length = 167

 Score = 35.9 bits (79), Expect = 0.11
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = -3

Query: 560 RGVERGDERVQRVREQHHERAHRQQVGGPAPAARRRLYEG 441
           RG ERG ERVQR  E   +    + +  P+P A R++ EG
Sbjct: 128 RGAERGKERVQRAGESFRKSGRGRYLPVPSPRATRQIGEG 167


>BC122550-1|AAI22551.1|  475|Homo sapiens VCP protein protein.
          Length = 475

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -1

Query: 319 RSLREGVGDSFAHDVELFSLILSTSSGFGSFAFNS 215
           R  R  V D+     E+F+  L  S GFGSF F S
Sbjct: 410 RFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPS 444


>BC121794-1|AAI21795.1|  806|Homo sapiens valosin-containing protein
           protein.
          Length = 806

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -1

Query: 319 RSLREGVGDSFAHDVELFSLILSTSSGFGSFAFNS 215
           R  R  V D+     E+F+  L  S GFGSF F S
Sbjct: 741 RFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPS 775


>BC110913-1|AAI10914.1|  806|Homo sapiens valosin-containing protein
           protein.
          Length = 806

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -1

Query: 319 RSLREGVGDSFAHDVELFSLILSTSSGFGSFAFNS 215
           R  R  V D+     E+F+  L  S GFGSF F S
Sbjct: 741 RFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPS 775


>BC007562-1|AAH07562.2|  644|Homo sapiens VCP protein protein.
          Length = 644

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -1

Query: 319 RSLREGVGDSFAHDVELFSLILSTSSGFGSFAFNS 215
           R  R  V D+     E+F+  L  S GFGSF F S
Sbjct: 579 RFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPS 613


>AL353795-2|CAH70993.1|  806|Homo sapiens valosin-containing protein
           protein.
          Length = 806

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -1

Query: 319 RSLREGVGDSFAHDVELFSLILSTSSGFGSFAFNS 215
           R  R  V D+     E+F+  L  S GFGSF F S
Sbjct: 741 RFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPS 775


>AF100752-1|AAD43016.1|  806|Homo sapiens transitional endoplasmic
           reticulum ATPase protein.
          Length = 806

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -1

Query: 319 RSLREGVGDSFAHDVELFSLILSTSSGFGSFAFNS 215
           R  R  V D+     E+F+  L  S GFGSF F S
Sbjct: 741 RFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPS 775


>AC004472-1|AAC07984.1|  806|Homo sapiens TERA_HUMAN protein.
          Length = 806

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -1

Query: 319 RSLREGVGDSFAHDVELFSLILSTSSGFGSFAFNS 215
           R  R  V D+     E+F+  L  S GFGSF F S
Sbjct: 741 RFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPS 775


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,121,170
Number of Sequences: 237096
Number of extensions: 1400224
Number of successful extensions: 9463
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9462
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)