Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16f18
         (611 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   4.4  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    23   5.9  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    23   5.9  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    23   5.9  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = -1

Query: 155  YHNAVHFRT*STYEPS*DCSVKATHYRKKSVKI-Q*NNNFFEYI--SQNVGK 9
            YHN  +  +    E   DCS  A+    KS K+    N  FE+   ++N GK
Sbjct: 3000 YHNITNNNSVMRLEYCIDCSQDASSITSKSYKVTNWINEIFEHFFNTENQGK 3051


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 16/63 (25%), Positives = 25/63 (39%)
 Frame = +3

Query: 72  LTIMGSLDRAILTGFICRLCSEMHRIVIHIYGEEGIRLCISEKISRYLTINISRADPLPK 251
           L  +G     ++ GF   L   +   V+      GI   ++E+ +R      S  DP P 
Sbjct: 468 LHFLGPAAGEVIQGFAAALKCGLTMQVLR--NTVGIHPTVAEEFTRLAITKRSGLDPTPA 525

Query: 252 TIC 260
           T C
Sbjct: 526 TCC 528


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 16/63 (25%), Positives = 25/63 (39%)
 Frame = +3

Query: 72  LTIMGSLDRAILTGFICRLCSEMHRIVIHIYGEEGIRLCISEKISRYLTINISRADPLPK 251
           L  +G     ++ GF   L   +   V+      GI   ++E+ +R      S  DP P 
Sbjct: 444 LHFLGPAAGEVIQGFAAALKCGLTMQVLR--NTVGIHPTVAEEFTRLAITKRSGLDPTPA 501

Query: 252 TIC 260
           T C
Sbjct: 502 TCC 504


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 16/63 (25%), Positives = 25/63 (39%)
 Frame = +3

Query: 72  LTIMGSLDRAILTGFICRLCSEMHRIVIHIYGEEGIRLCISEKISRYLTINISRADPLPK 251
           L  +G     ++ GF   L   +   V+      GI   ++E+ +R      S  DP P 
Sbjct: 441 LHFLGPAAGEVIQGFAAALKCGLTMQVLR--NTVGIHPTVAEEFTRLAITKRSGLDPTPA 498

Query: 252 TIC 260
           T C
Sbjct: 499 TCC 501


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,022
Number of Sequences: 2352
Number of extensions: 14596
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)