Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16f15
         (357 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU051652-1|ABS85191.1|  973|Caenorhabditis elegans MEL-46 protein.     28   2.2  
CU457744-1|CAM36366.2|  973|Caenorhabditis elegans Hypothetical ...    28   2.2  
U50309-4|AAG24133.1|  267|Caenorhabditis elegans Hypothetical pr...    27   2.9  
AL161712-14|CAC35895.1|  286|Caenorhabditis elegans Hypothetical...    27   3.9  
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr...    27   5.1  
U23518-2|AAC70884.4|  496|Caenorhabditis elegans Hypothetical pr...    27   5.1  
U55856-7|AAA98025.1|  249|Caenorhabditis elegans Hypothetical pr...    26   6.7  
AF025450-2|AAB70936.3|  350|Caenorhabditis elegans Hypothetical ...    26   6.7  
Z81055-4|CAB02893.1|  824|Caenorhabditis elegans Hypothetical pr...    26   8.9  
AF098504-5|AAC67410.3|  322|Caenorhabditis elegans Serpentine re...    26   8.9  

>EU051652-1|ABS85191.1|  973|Caenorhabditis elegans MEL-46 protein.
          Length = 973

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = -1

Query: 141 RVSPVVHRNIPVGKLGRHSNRVMRSFEGKTV 49
           R SPV  R IPVG LGR      +S  GKT+
Sbjct: 44  RPSPVQARAIPVGLLGRDMLVQAKSGTGKTL 74


>CU457744-1|CAM36366.2|  973|Caenorhabditis elegans Hypothetical
           protein T06A10.1 protein.
          Length = 973

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = -1

Query: 141 RVSPVVHRNIPVGKLGRHSNRVMRSFEGKTV 49
           R SPV  R IPVG LGR      +S  GKT+
Sbjct: 44  RPSPVQARAIPVGLLGRDMLVQAKSGTGKTL 74


>U50309-4|AAG24133.1|  267|Caenorhabditis elegans Hypothetical
           protein F58G4.4 protein.
          Length = 267

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +2

Query: 26  NKTVGNMATVLPSNDLITRFECLPNF--PTGIFRCTTGE 136
           +KT+ N   V     +  RFECLP+F  P   + CT+GE
Sbjct: 112 HKTISNENGVSVFTSI--RFECLPSFYGPKCQYYCTSGE 148


>AL161712-14|CAC35895.1|  286|Caenorhabditis elegans Hypothetical
           protein Y66D12A.18 protein.
          Length = 286

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +2

Query: 38  GNMATVLPSNDLITRFECLPNFPTGIFRCTTGETLGSGADKG 163
           G+ + V   N + T F+  P F T     T G   G G+ +G
Sbjct: 220 GSRSNVFDHNSMTTTFQANPQFATHNGSNTVGGRFGGGSRRG 261


>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
           protein C16A3.7 protein.
          Length = 1119

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 95  PNFPTGIFRCTTGETLGSGADKGCCYQCPE 184
           PNF  G    + GET G     GC + C E
Sbjct: 307 PNFRVGEVPHSCGETCGGARKFGCPHPCTE 336


>U23518-2|AAC70884.4|  496|Caenorhabditis elegans Hypothetical
           protein F21D12.3 protein.
          Length = 496

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 336 LFIDLKLIFKTFPNGVVGGFQGFLPVLALGFRQ 238
           L I+L +IF     GV+G +QG L ++   F +
Sbjct: 426 LIINLIIIFGAILGGVLGSYQGVLKLIKAKFTE 458


>U55856-7|AAA98025.1|  249|Caenorhabditis elegans Hypothetical
           protein F31E8.1 protein.
          Length = 249

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 162 PLSAPLPRVSPVVHRNIPVGKL 97
           P  +P  RV+P+ H  +P GKL
Sbjct: 99  PAPSPPSRVTPIRHSPLPAGKL 120


>AF025450-2|AAB70936.3|  350|Caenorhabditis elegans Hypothetical
           protein C41H7.5 protein.
          Length = 350

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +3

Query: 258 KREENLENHQPHHLE 302
           K+EEN ENH+ +H+E
Sbjct: 217 KQEENHENHEEYHVE 231


>Z81055-4|CAB02893.1|  824|Caenorhabditis elegans Hypothetical
           protein F01G10.5 protein.
          Length = 824

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -2

Query: 191 RNIPDIDNSNLYQHHYQESHRWCTEIYQLEN*EDIRT 81
           RN  D DN+       +E HR  TE    EN + ++T
Sbjct: 403 RNKQDADNARAQLEEEREKHRLATEKLHQENIDYMKT 439


>AF098504-5|AAC67410.3|  322|Caenorhabditis elegans Serpentine
           receptor, class t protein62 protein.
          Length = 322

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +2

Query: 83  FECLPNFPTGIF 118
           F+CLP+F TGIF
Sbjct: 68  FQCLPHFVTGIF 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,692,792
Number of Sequences: 27780
Number of extensions: 152383
Number of successful extensions: 408
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)