Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16f15
         (357 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    24   0.62 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    24   0.62 
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   5.8  
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            21   5.8  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.8 bits (49), Expect = 0.62
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 47  ATVLPSNDLITRFECLPNFP 106
           ATVLP++    R+E  P FP
Sbjct: 92  ATVLPNSCYQERYEYFPGFP 111


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.8 bits (49), Expect = 0.62
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 47  ATVLPSNDLITRFECLPNFP 106
           ATVLP++    R+E  P FP
Sbjct: 92  ATVLPNSCYQERYEYFPGFP 111


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 38  RQFYFKQILKEQ 3
           +QFYF Q  K+Q
Sbjct: 187 KQFYFHQFYKQQ 198


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 6/16 (37%), Positives = 8/16 (50%)
 Frame = -2

Query: 173 DNSNLYQHHYQESHRW 126
           D   LY H + + H W
Sbjct: 59  DGIELYHHKFFQVHEW 74


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,864
Number of Sequences: 438
Number of extensions: 2014
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8308335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)