Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16f12
         (727 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   4.2  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   5.5  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   5.5  
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    23   9.6  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +3

Query: 306 CHVEQDPYCPKSITIVKETVSQEVHKHENCESDKEV 413
           CH + + YCP+  T+      Q V   E  +  + V
Sbjct: 64  CHGQIEKYCPEEYTVDPSNTFQLVQGRELTKPSRRV 99


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 168 EDCDTTSIYKAVEKGTQTSSTGLS 239
           E+CD  +I  A E GT     GLS
Sbjct: 141 EECDRLNISYAFENGTALEIPGLS 164


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 168 EDCDTTSIYKAVEKGTQTSSTGLS 239
           E+CD  +I  A E GT     GLS
Sbjct: 142 EECDRLNISYAFENGTALEIPGLS 165


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 369 QEVHKHENCESDKEVSAHRYVYKKEVIE 452
           Q   +H+  E +KE   +RY+ ++  IE
Sbjct: 11  QSYSRHQTIELEKEFHFNRYLNRRRRIE 38


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,120
Number of Sequences: 2352
Number of extensions: 12258
Number of successful extensions: 110
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)