BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16f12
(727 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003589-1|AAO39592.1| 796|Drosophila melanogaster LD03662p pro... 32 0.69
AE014297-2554|AAF55575.2| 1784|Drosophila melanogaster CG31224-P... 32 0.69
BT021400-1|AAX33548.1| 1098|Drosophila melanogaster LD13667p pro... 32 0.91
AF222744-1|AAG44254.1| 1098|Drosophila melanogaster RanBP16 prot... 32 0.91
AE014298-2289|AAF48541.3| 1098|Drosophila melanogaster CG33180-P... 32 0.91
BT004494-1|AAO42658.1| 1113|Drosophila melanogaster GH24302p pro... 30 3.7
AE014296-2185|AAN11856.1| 1047|Drosophila melanogaster CG32106-P... 30 3.7
BT003219-1|AAO24974.1| 186|Drosophila melanogaster RE05274p pro... 29 4.9
AY058247-1|AAL13476.1| 340|Drosophila melanogaster GH01208p pro... 29 4.9
AE014297-3641|AAF56346.2| 186|Drosophila melanogaster CG13636-P... 29 4.9
AE014134-1754|AAF52849.2| 1317|Drosophila melanogaster CG13131-P... 29 4.9
AE014134-1476|AAF52653.1| 340|Drosophila melanogaster CG17292-P... 29 4.9
AE014134-1475|AAF52652.1| 340|Drosophila melanogaster CG17292-P... 29 4.9
>BT003589-1|AAO39592.1| 796|Drosophila melanogaster LD03662p
protein.
Length = 796
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Frame = +2
Query: 110 HVKLYLNVYPD-DADQESELRRL*-----HHQHI*SRRERNTNQQHRSIPELHTYG 259
H +++LN P A Q+ ++ L HHQH ++ + + Q H+ P L TYG
Sbjct: 184 HTEVFLNPPPPPSAQQQLQIHSLVQNQGQHHQHSHPQQSQPSQQSHQQPPSLQTYG 239
>AE014297-2554|AAF55575.2| 1784|Drosophila melanogaster CG31224-PA
protein.
Length = 1784
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Frame = +2
Query: 110 HVKLYLNVYPD-DADQESELRRL*-----HHQHI*SRRERNTNQQHRSIPELHTYG 259
H +++LN P A Q+ ++ L HHQH ++ + + Q H+ P L TYG
Sbjct: 358 HTEVFLNPPPPPSAQQQLQIHSLVQNQGQHHQHSHPQQSQPSQQSHQQPPSLQTYG 413
>BT021400-1|AAX33548.1| 1098|Drosophila melanogaster LD13667p
protein.
Length = 1098
Score = 31.9 bits (69), Expect = 0.91
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 503 QLVLGLAVQRRVGLEVRFDDLLLVHVPVGAHFFITLAVLVLVNLLRYGFFD 351
+L+ GL++Q R+ + + L VP HF + V +L L +YG+FD
Sbjct: 64 KLIQGLSLQERIDIR-SYALNYLATVPNLQHFVVQALVSLLAKLTKYGWFD 113
>AF222744-1|AAG44254.1| 1098|Drosophila melanogaster RanBP16
protein.
Length = 1098
Score = 31.9 bits (69), Expect = 0.91
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 503 QLVLGLAVQRRVGLEVRFDDLLLVHVPVGAHFFITLAVLVLVNLLRYGFFD 351
+L+ GL++Q R+ + + L VP HF + V +L L +YG+FD
Sbjct: 64 KLIQGLSLQERIDIR-SYALNYLATVPNLQHFVVQALVSLLAKLTKYGWFD 113
>AE014298-2289|AAF48541.3| 1098|Drosophila melanogaster CG33180-PB
protein.
Length = 1098
Score = 31.9 bits (69), Expect = 0.91
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 503 QLVLGLAVQRRVGLEVRFDDLLLVHVPVGAHFFITLAVLVLVNLLRYGFFD 351
+L+ GL++Q R+ + + L VP HF + V +L L +YG+FD
Sbjct: 64 KLIQGLSLQERIDIR-SYALNYLATVPNLQHFVVQALVSLLAKLTKYGWFD 113
>BT004494-1|AAO42658.1| 1113|Drosophila melanogaster GH24302p
protein.
Length = 1113
Score = 29.9 bits (64), Expect = 3.7
Identities = 16/76 (21%), Positives = 38/76 (50%)
Frame = +3
Query: 486 KTKDELVAAALHSAVKDFPDYKHCLQMEDKGSKHSCPDKNSPGKVNAVTSIDPSAIIISM 665
K+ D + + ++A P + C +GSK+ CP ++SP + + ++SI+ ++
Sbjct: 335 KSSDMSFSNSSYTAPSVNPSERECFS---EGSKNECPKESSPERNSKISSIEKTSHSSLK 391
Query: 666 IETGKNKDKSSHSLQE 713
+ NK + +++
Sbjct: 392 FSSKTNKSPQRNKVKQ 407
>AE014296-2185|AAN11856.1| 1047|Drosophila melanogaster CG32106-PA
protein.
Length = 1047
Score = 29.9 bits (64), Expect = 3.7
Identities = 16/76 (21%), Positives = 38/76 (50%)
Frame = +3
Query: 486 KTKDELVAAALHSAVKDFPDYKHCLQMEDKGSKHSCPDKNSPGKVNAVTSIDPSAIIISM 665
K+ D + + ++A P + C +GSK+ CP ++SP + + ++SI+ ++
Sbjct: 217 KSSDMSFSNSSYTAPSVNPSERECFS---EGSKNECPKESSPERNSKISSIEKTSHSSLK 273
Query: 666 IETGKNKDKSSHSLQE 713
+ NK + +++
Sbjct: 274 FSSKTNKSPQRNKVKQ 289
>BT003219-1|AAO24974.1| 186|Drosophila melanogaster RE05274p
protein.
Length = 186
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 480 DCKTKDELVAAALHSAVKDFPDYK-HCLQMEDK-GSKHSCPD 599
+C D+ A S VKD DYK CL +D S SCPD
Sbjct: 53 ECSAHDDCTAIDRTSCVKDPNDYKLRCLCGDDSPPSAGSCPD 94
>AY058247-1|AAL13476.1| 340|Drosophila melanogaster GH01208p
protein.
Length = 340
Score = 29.5 bits (63), Expect = 4.9
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 77 LAHEQHMNIGEHVKLYLNVYPDDADQES 160
L ++H+++G++ LYL+ Y +D D ES
Sbjct: 49 LLEDEHLDLGKNTVLYLHGYLEDPDVES 76
>AE014297-3641|AAF56346.2| 186|Drosophila melanogaster CG13636-PA,
isoform A protein.
Length = 186
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 480 DCKTKDELVAAALHSAVKDFPDYK-HCLQMEDK-GSKHSCPD 599
+C D+ A S VKD DYK CL +D S SCPD
Sbjct: 53 ECSAHDDCTAIDRTSCVKDPNDYKLRCLCGDDSPPSAGSCPD 94
>AE014134-1754|AAF52849.2| 1317|Drosophila melanogaster CG13131-PA
protein.
Length = 1317
Score = 29.5 bits (63), Expect = 4.9
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 528 VKDFPDYKHCLQMEDKGSKHSCPDKNSPGKVNAVTSIDPSAI 653
+KD K CL +++K H P N+P KVN + I PS I
Sbjct: 656 IKDHSTSK-CLNLQEK-IDHIPPRDNNPAKVNDQSKITPSKI 695
>AE014134-1476|AAF52653.1| 340|Drosophila melanogaster CG17292-PB,
isoform B protein.
Length = 340
Score = 29.5 bits (63), Expect = 4.9
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 77 LAHEQHMNIGEHVKLYLNVYPDDADQES 160
L ++H+++G++ LYL+ Y +D D ES
Sbjct: 49 LLEDEHLDLGKNTVLYLHGYLEDPDVES 76
>AE014134-1475|AAF52652.1| 340|Drosophila melanogaster CG17292-PA,
isoform A protein.
Length = 340
Score = 29.5 bits (63), Expect = 4.9
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 77 LAHEQHMNIGEHVKLYLNVYPDDADQES 160
L ++H+++G++ LYL+ Y +D D ES
Sbjct: 49 LLEDEHLDLGKNTVLYLHGYLEDPDVES 76
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,186,174
Number of Sequences: 53049
Number of extensions: 570961
Number of successful extensions: 1688
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1686
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -