Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16f12
         (727 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12966-6|AAM48533.1|  783|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81124-10|CAH60752.1|  241|Caenorhabditis elegans Hypothetical p...    28   5.9  
Z78201-4|CAB01590.2|  911|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z78019-10|CAE46691.1|  911|Caenorhabditis elegans Hypothetical p...    28   7.8  
AC084197-43|AAM44392.2|  222|Caenorhabditis elegans Hypothetical...    28   7.8  

>U12966-6|AAM48533.1|  783|Caenorhabditis elegans Hypothetical
           protein F54D8.6 protein.
          Length = 783

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 19/67 (28%), Positives = 33/67 (49%)
 Frame = +3

Query: 303 ICHVEQDPYCPKSITIVKETVSQEVHKHENCESDKEVSAHRYVYKKEVIEPYLEPDPSLD 482
           I  V++D     S T VK+T+++++ K E    D +   HR++ KK  +   +     L 
Sbjct: 717 IMEVKKDMENIISNTTVKDTINKDMGKMEIHIMDMKAKMHRHITKKMAVNTTINTTVLLL 776

Query: 483 CKTKDEL 503
            K K +L
Sbjct: 777 QKVKLQL 783


>Z81124-10|CAH60752.1|  241|Caenorhabditis elegans Hypothetical
           protein T21B4.15 protein.
          Length = 241

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 447 IEPYLEPDPSLDCKTKDELVAAALHSAVKDF 539
           +E Y EP+  +DC  +DEL++A +     DF
Sbjct: 17  LEDYEEPELRIDCGDEDELMSATVTQQGFDF 47


>Z78201-4|CAB01590.2|  911|Caenorhabditis elegans Hypothetical
           protein ZK836.2 protein.
          Length = 911

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = -3

Query: 560 QAMFVV-REVFDGRVERGRDQLVLGLAVQRRVGLEVRFDDLLLVHV 426
           ++MF    E+F+G  E+  +++++G+A + R+ L  +  D   VH+
Sbjct: 186 ESMFAFFSELFEGAAEKQVEEIIIGIAHRGRLNLLTQLMDFPPVHM 231


>Z78019-10|CAE46691.1|  911|Caenorhabditis elegans Hypothetical
           protein ZK836.2 protein.
          Length = 911

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = -3

Query: 560 QAMFVV-REVFDGRVERGRDQLVLGLAVQRRVGLEVRFDDLLLVHV 426
           ++MF    E+F+G  E+  +++++G+A + R+ L  +  D   VH+
Sbjct: 186 ESMFAFFSELFEGAAEKQVEEIIIGIAHRGRLNLLTQLMDFPPVHM 231


>AC084197-43|AAM44392.2|  222|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.36 protein.
          Length = 222

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = -1

Query: 187 LVVSQSSKLRFLVGIVRVHVQV*FNMFSNVHVLFMC*LFYI 65
           ++ ++ +K  F+  I R H++  F M +  H++ +C +F+I
Sbjct: 167 IMKTEQAKRAFVEKIDRQHIETAFEMINFWHIMRVCLVFFI 207


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,423,101
Number of Sequences: 27780
Number of extensions: 289328
Number of successful extensions: 849
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)