Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16f09
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77659-8|CAB01170.1| 958|Caenorhabditis elegans Hypothetical pr... 32 0.46
Z77657-11|CAB01153.1| 958|Caenorhabditis elegans Hypothetical p... 32 0.46
AF295093-1|AAG03081.1| 958|Caenorhabditis elegans bimC kinesin ... 32 0.46
AB024428-1|BAC19818.1| 958|Caenorhabditis elegans kinesin like ... 32 0.46
AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily a... 28 5.7
AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily a... 28 5.7
Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 28 7.5
AC024830-5|AAK68534.3| 444|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z77659-8|CAB01170.1| 958|Caenorhabditis elegans Hypothetical
protein F23B12.8 protein.
Length = 958
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +2
Query: 533 KRMSAGFDKQNLIVSSCTTEPSFVVKELQNNLCSHVQLQQSSPKNSEMHIID 688
K+MS D + + +S + + K+L N+C HV+ +S+ ++ E +D
Sbjct: 525 KKMSDFIDTTSKLTNSLKADGDLLSKKLSENICPHVKSMESAHRDIESTAMD 576
>Z77657-11|CAB01153.1| 958|Caenorhabditis elegans Hypothetical
protein F23B12.8 protein.
Length = 958
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +2
Query: 533 KRMSAGFDKQNLIVSSCTTEPSFVVKELQNNLCSHVQLQQSSPKNSEMHIID 688
K+MS D + + +S + + K+L N+C HV+ +S+ ++ E +D
Sbjct: 525 KKMSDFIDTTSKLTNSLKADGDLLSKKLSENICPHVKSMESAHRDIESTAMD 576
>AF295093-1|AAG03081.1| 958|Caenorhabditis elegans bimC kinesin
BMK-1 protein.
Length = 958
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +2
Query: 533 KRMSAGFDKQNLIVSSCTTEPSFVVKELQNNLCSHVQLQQSSPKNSEMHIID 688
K+MS D + + +S + + K+L N+C HV+ +S+ ++ E +D
Sbjct: 525 KKMSDFIDTTSKLTNSLKADGDLLSKKLSENICPHVKSMESAHRDIESTAMD 576
>AB024428-1|BAC19818.1| 958|Caenorhabditis elegans kinesin like
protein KLP-14 protein.
Length = 958
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +2
Query: 533 KRMSAGFDKQNLIVSSCTTEPSFVVKELQNNLCSHVQLQQSSPKNSEMHIID 688
K+MS D + + +S + + K+L N+C HV+ +S+ ++ E +D
Sbjct: 525 KKMSDFIDTTSKLTNSLKADGDLLSKKLSENICPHVKSMESAHRDIESTAMD 576
>AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform b protein.
Length = 765
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 242 LGIFWFKKKREYAKSDPGGRERLKSLKEELAEVLNAQAEANRGSPISKL 388
+ ++W K K++ AKSD GG + S K + A +EA GS +S +
Sbjct: 152 MDVYWGKNKKKPAKSD-GGSKSSSSKKNDARGPSEAPSEA--GSEVSSV 197
>AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform a protein.
Length = 851
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 242 LGIFWFKKKREYAKSDPGGRERLKSLKEELAEVLNAQAEANRGSPISKL 388
+ ++W K K++ AKSD GG + S K + A +EA GS +S +
Sbjct: 152 MDVYWGKNKKKPAKSD-GGSKSSSSKKNDARGPSEAPSEA--GSEVSSV 197
>Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical
protein R09D1.3 protein.
Length = 435
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/64 (25%), Positives = 35/64 (54%)
Frame = +2
Query: 104 IDKIHSYFEIKKYFSLDLPNCH*KWLITMAPCRQLLMWSVPSIAVLLGIFWFKKKREYAK 283
+DK HSY+E + + + +L K ++ ++ L + S A+ +F F K+ +++K
Sbjct: 8 LDKFHSYYERRAHNNNELTTKLVKRVVIISGI--FLFCGIVSYALTTFVFHFYKEDKFSK 65
Query: 284 SDPG 295
++ G
Sbjct: 66 NEVG 69
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 257 FKKKREYAKSDPGGRERLKSLKEELAEVLNAQAEANR 367
F+K E K+ ERLK L+E+L + QAE +R
Sbjct: 952 FEKALEQRKAKKEEAERLKKLEEKLKKEKEKQAEKDR 988
>AC024830-5|AAK68534.3| 444|Caenorhabditis elegans Hypothetical
protein Y55F3BR.4 protein.
Length = 444
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 89 IAKFQIDKIHSYFEIKKYFSLDLPNCH*KWLITMAPCRQLLMWSVPSIAVLLGIFWFKKK 268
+A+F + H+ + F D P C +++ R LL +PSI ++ +F+ + K
Sbjct: 182 VAQFHDLRSHTQKLLTNVFLGDYPTCSLEFIFKSEWPRALLSSFLPSILIVSSVFFAQWK 241
Query: 269 R 271
R
Sbjct: 242 R 242
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,443,212
Number of Sequences: 27780
Number of extensions: 305726
Number of successful extensions: 642
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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