Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16f06
(706 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0584 + 18971761-18971834,18971852-18973133,18973197-189745... 89 4e-18
02_05_0835 - 32099966-32100111,32100418-32100465,32100673-321007... 56 3e-08
07_03_0551 + 19374405-19374541,19375201-19375435,19375539-193757... 54 8e-08
04_04_1111 - 30979334-30979479,30979769-30979866,30980364-309804... 48 7e-06
07_03_0151 - 14465479-14465675,14466280-14466401,14466934-144670... 40 0.002
12_02_0241 + 16190408-16191103 31 0.89
07_03_1208 - 24896905-24896931,24897330-24897341,24898058-248983... 31 1.2
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 29 2.7
06_03_0543 + 21967787-21970261 29 3.6
11_04_0365 - 16818468-16818514,16818619-16821706,16822860-168229... 28 6.3
04_03_0904 + 20717005-20718087 28 6.3
06_02_0139 + 12247051-12247155,12247250-12247327,12247412-122475... 28 8.3
05_05_0315 - 24030695-24030787,24030896-24030995,24031120-240312... 28 8.3
05_01_0050 - 341869-342231,342370-342522,342784-342844,343032-34... 28 8.3
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 28 8.3
>10_08_0584 + 18971761-18971834,18971852-18973133,18973197-18974509,
18993885-18993935,18994674-18994829,18995048-18995123,
18995317-18995364,18995445-18995489,18995580-18995679,
18995923-18995968,18996115-18996176,18996257-18996355,
18996536-18996609,18996721-18996790,18997074-18997162,
18997327-18997404
Length = 1220
Score = 88.6 bits (210), Expect = 4e-18
Identities = 45/100 (45%), Positives = 61/100 (61%)
Frame = +1
Query: 397 PSYTFTGKLRPFPAGPKRTVPPHIGRPDYADHPTGFPASEYAAKGSAQIKILDDEEIEGM 576
P + +TG LRP+P VP I +PD+A G P E + +++I E+IE M
Sbjct: 953 PRFDWTGPLRPYPISKMCVVPDKIEKPDWA--LDGTPKIEPDSDLQKRVEIKTPEQIERM 1010
Query: 577 RVACRLGREVLDEAARVCDVGVSTDEIDRVVHEACIERGM 696
R CR+ REVLD AAR+ G++TDEIDRVVHE + RG+
Sbjct: 1011 RETCRIAREVLDAAARIIKPGITTDEIDRVVHEETVARGL 1050
>02_05_0835 -
32099966-32100111,32100418-32100465,32100673-32100770,
32101269-32101348,32101615-32101686,32102260-32102301,
32102382-32102543,32102971-32103199,32103681-32103747,
32103907-32104003
Length = 346
Score = 56.0 bits (129), Expect = 3e-08
Identities = 32/95 (33%), Positives = 51/95 (53%)
Frame = +1
Query: 418 KLRPFPAGPKRTVPPHIGRPDYADHPTGFPASEYAAKGSAQIKILDDEEIEGMRVACRLG 597
+LRP P+ +VP HI RP Y + A + + +I D+ IE MR + +L
Sbjct: 67 RLRPGKVSPRLSVPKHIQRPPYVN------ARQRPGLHNGP-EIHDERGIECMRASGKLA 119
Query: 598 REVLDEAARVCDVGVSTDEIDRVVHEACIERGMLP 702
+VL A + + G++TDEID+ VH+ ++ G P
Sbjct: 120 AQVLKFAGTLVEPGITTDEIDKAVHQMIVDNGAYP 154
>07_03_0551 +
19374405-19374541,19375201-19375435,19375539-19375700,
19375778-19375819,19375941-19376012,19376291-19376370,
19376962-19377059,19377691-19377738,19377983-19378083,
19378331-19378426,19378599-19378689,19379510-19379706,
19380918-19381004,19381208-19381488,19381653-19381743
Length = 605
Score = 54.4 bits (125), Expect = 8e-08
Identities = 36/94 (38%), Positives = 44/94 (46%)
Frame = +1
Query: 421 LRPFPAGPKRTVPPHIGRPDYADHPTGFPASEYAAKGSAQIKILDDEEIEGMRVACRLGR 600
LR P+ VP HI RP Y S + S+ +I E I GMR AC+L
Sbjct: 61 LRRGKISPQLPVPEHIPRPSYV-------GSNRPQELSSVRQIHSAEGIAGMRAACKLAA 113
Query: 601 EVLDEAARVCDVGVSTDEIDRVVHEACIERGMLP 702
LD A + V+T+EIDR VH IE G P
Sbjct: 114 RALDFAGTLIKPSVTTNEIDREVHNMIIEAGAYP 147
>04_04_1111 -
30979334-30979479,30979769-30979866,30980364-30980443,
30980685-30980756,30980860-30980901,30981009-30981170,
30981276-30981427,30981453-30981538,30981654-30981726,
30982706-30982889
Length = 364
Score = 48.0 bits (109), Expect = 7e-06
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Frame = +1
Query: 358 DNTDAANVEYNPWPSYTFTGKLRPFPAGPKRTVPP---HIGRPDYADHPTGFPASEYAAK 528
+ + AN N + T K + + K T P HI +P Y ASE A+
Sbjct: 78 EGLEKANPSSNTCKNSKVTRKAKFGTSEEKSTTDPWDSHITQPPYVGKKD---ASEIAS- 133
Query: 529 GSAQIKILDDEEIEGMRVACRLGREVLDEAARVCDVGVSTDEIDRVVHEACIERGMLP 702
+I++ D I M+ AC L VL+ A + V+TDEID+ VH+ I+ G P
Sbjct: 134 ---EIQMHDKVSIIHMKAACELAARVLEYAGTLVKPSVTTDEIDKAVHKMIIDAGAYP 188
>07_03_0151 -
14465479-14465675,14466280-14466401,14466934-14467081,
14467146-14467167,14467299-14467393,14467395-14467438,
14467750-14467841,14467911-14467982,14468188-14468229,
14468333-14468494,14468631-14468683,14468808-14468925,
14468974-14469150,14469573-14469639,14470195-14470273,
14473805-14473862,14474257-14474346,14474429-14474540,
14474649-14474912,14475361-14475463,14476200-14476278,
14476748-14476852
Length = 766
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 553 DDEEIEGMRVACRLGREVLDEAARVCDVGVSTDEIDRVVHEACIERGMLP 702
D+ +E AC L VL+ A + +TDEIDR VH+ I+ G P
Sbjct: 409 DEGALEARHAACELTARVLEYAGTLVKPLATTDEIDRAVHQMIIDAGAYP 458
>12_02_0241 + 16190408-16191103
Length = 231
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 553 DDEEIEGMRVACRLGREVLDEAARVCDVGVSTDEIDRVVHE 675
+ EE+E A LG+ + +E DVG+ TDE++R V +
Sbjct: 171 ESEEVEEQGGAISLGKVIEEEMIEEEDVGLPTDELNRRVED 211
>07_03_1208 -
24896905-24896931,24897330-24897341,24898058-24898333,
24898410-24898466,24898561-24898638,24899112-24899198,
24899815-24899904,24900012-24900218
Length = 277
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +1
Query: 532 SAQIKILDDEEIEGMRVACRLGREVLDEAARVCDV---GVSTDEIDR 663
S+ KIL+ +E E + CR R LD A+ V DV G+ T EI +
Sbjct: 122 SSSSKILNADEKEMVSTVCRKARLALDLASEVMDVAAFGLGTTEISQ 168
>02_01_0084 -
573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 454 VPP-HIGRPDYADHPTGFPASEYAAKGSAQIKILDDEEIEGMRVACRLGREVLDEAARVC 630
+PP H P+ + H G P S S+Q K+ +E+EG C + + RVC
Sbjct: 223 IPPIHYEEPE-SGHGDGEPLSIQKEVASSQFKVTASDEMEGNSNIC-VACGTPGDLNRVC 280
Query: 631 DVG 639
D G
Sbjct: 281 DSG 283
>06_03_0543 + 21967787-21970261
Length = 824
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 706 TWVTFPVQCKPRGLHGQS 653
TW+ FP CK RGL GQ+
Sbjct: 271 TWMAFPQLCKVRGLCGQN 288
>11_04_0365 -
16818468-16818514,16818619-16821706,16822860-16822919,
16823595-16823954
Length = 1184
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 686 SMQASWTTRSISSVLTPTSHTLAASSRTS 600
SM W +SS+LTP T ASS +S
Sbjct: 7 SMAVKWAIDKLSSLLTPVRQTPVASSSSS 35
>04_03_0904 + 20717005-20718087
Length = 360
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 397 PSYTFTGKLRPFPAGPKRTVPPHIGR-PDYADHPT 498
P+YT T K P P PK T P H P Y PT
Sbjct: 83 PTYTPTPKPTPPPYTPKPTPPAHTPTPPTYTPTPT 117
>06_02_0139 +
12247051-12247155,12247250-12247327,12247412-12247519,
12247882-12247944,12248024-12248185,12248424-12248624,
12248663-12248725,12248915-12249244,12249870-12250034,
12250110-12251078
Length = 747
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 349 REGDNTDAANVEYNPWPSYTFTGKLRPFPAGPKRTV 456
REG + ++V+ PS+ F G +R P+ P RTV
Sbjct: 492 REGMEIEVSHVKRKDIPSFVFPGGIR--PSRPSRTV 525
>05_05_0315 -
24030695-24030787,24030896-24030995,24031120-24031247,
24031350-24031517,24031626-24031741,24031773-24031896,
24032085-24032254,24032255-24032999
Length = 547
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +1
Query: 406 TFTGKLRPFPAGPKRTVPPHIGRPDYADHPTGFPASEYAAKGSAQIKILDDEEIEGMRVA 585
T + P PA P + P +GRP D + + + +G + L + G R A
Sbjct: 37 TISPSAAPAPAKPPAPIGPVLGRP-MEDVKSIYTVGKELGRGQFGVTSLCTHKATGQRFA 95
Query: 586 CR 591
C+
Sbjct: 96 CK 97
>05_01_0050 -
341869-342231,342370-342522,342784-342844,343032-343552,
343682-343711
Length = 375
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 698 NIPRSMQASWTTRSISSVLTPT 633
N+ RSM SW T+++ ++L PT
Sbjct: 83 NVARSMAMSWYTQALRTLLAPT 104
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 397 PSYTFTGKLRPFPAGPKRTVPPHIGRPDYADHPTGFPASEYAAKGSA 537
PSY G G + + P P Y+ P AS Y +GSA
Sbjct: 556 PSYGAQGVAGQASPGQQTSTPAAGSHPGYSSQPPTSAASSYPVQGSA 602
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,595,815
Number of Sequences: 37544
Number of extensions: 392942
Number of successful extensions: 1206
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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