Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16f06
(706 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D42084-1|BAA07679.1| 394|Homo sapiens KIAA0094 protein. 133 5e-31
BC030054-1|AAH30054.1| 272|Homo sapiens methionyl aminopeptidas... 80 9e-15
DQ005576-1|AAY55948.1| 464|Homo sapiens mitochondrial methionin... 49 1e-05
BC113644-1|AAI13645.1| 335|Homo sapiens methionine aminopeptida... 49 1e-05
AY374142-1|AAR27795.1| 335|Homo sapiens mitochondrial methionin... 49 1e-05
U47924-15|AAB51321.1| 1190|Homo sapiens DRPLA protein. 32 2.3
U23851-1|AAB50276.1| 1184|Homo sapiens atrophin-1 protein. 32 2.3
D38529-1|BAA07534.1| 1182|Homo sapiens DRPLA protein protein. 32 2.3
D31840-1|BAA06626.1| 1185|Homo sapiens DRPLA protein. 32 2.3
BC051795-1|AAH51795.1| 1191|Homo sapiens atrophin 1 protein. 32 2.3
AB209345-1|BAD92582.1| 774|Homo sapiens atrophin-1 variant prot... 32 2.3
>D42084-1|BAA07679.1| 394|Homo sapiens KIAA0094 protein.
Length = 394
Score = 133 bits (322), Expect = 5e-31
Identities = 63/114 (55%), Positives = 77/114 (67%), Gaps = 1/114 (0%)
Frame = +1
Query: 364 TDAANVEYNPWPSYTFTGKLRP-FPAGPKRTVPPHIGRPDYADHPTGFPASEYAAKGSAQ 540
T ++ +PW Y +TGKLRP +P P R VP +I RPDYADHP G SE A KG++Q
Sbjct: 76 TVEGDINTDPWAGYRYTGKLRPHYPLMPTRPVPSYIQRPDYADHPLGMSESEQALKGTSQ 135
Query: 541 IKILDDEEIEGMRVACRLGREVLDEAARVCDVGVSTDEIDRVVHEACIERGMLP 702
IK+L E+IEGMR+ CRL REVLD AA + GV+T+EID VH ACI R P
Sbjct: 136 IKLLSSEDIEGMRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYP 189
>BC030054-1|AAH30054.1| 272|Homo sapiens methionyl aminopeptidase 1
protein.
Length = 272
Score = 79.8 bits (188), Expect = 9e-15
Identities = 38/64 (59%), Positives = 46/64 (71%)
Frame = +1
Query: 511 SEYAAKGSAQIKILDDEEIEGMRVACRLGREVLDEAARVCDVGVSTDEIDRVVHEACIER 690
SE A KG++QIK+L E+IEGMR+ CRL REVLD AA + GV+T+EID VH ACI R
Sbjct: 4 SEQALKGTSQIKLLSSEDIEGMRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIAR 63
Query: 691 GMLP 702
P
Sbjct: 64 NCYP 67
>DQ005576-1|AAY55948.1| 464|Homo sapiens mitochondrial methionine
aminopeptidase 3 protein.
Length = 464
Score = 49.2 bits (112), Expect = 1e-05
Identities = 29/92 (31%), Positives = 44/92 (47%)
Frame = +1
Query: 427 PFPAGPKRTVPPHIGRPDYADHPTGFPASEYAAKGSAQIKILDDEEIEGMRVACRLGREV 606
P VP HI +PDY TG I++ ++++I+G+ AC+L R V
Sbjct: 184 PAAVSSAHPVPKHIKKPDYVT--TGI-----VPDWGDSIEVKNEDQIQGLHQACQLARHV 236
Query: 607 LDEAARVCDVGVSTDEIDRVVHEACIERGMLP 702
L A + V ++T+EID +VH I P
Sbjct: 237 LLLAGKSLKVDMTTEEIDALVHREIISHNAYP 268
>BC113644-1|AAI13645.1| 335|Homo sapiens methionine aminopeptidase
1D protein.
Length = 335
Score = 49.2 bits (112), Expect = 1e-05
Identities = 29/92 (31%), Positives = 44/92 (47%)
Frame = +1
Query: 427 PFPAGPKRTVPPHIGRPDYADHPTGFPASEYAAKGSAQIKILDDEEIEGMRVACRLGREV 606
P VP HI +PDY TG I++ ++++I+G+ AC+L R V
Sbjct: 55 PAAVSSAHPVPKHIKKPDYVT--TGI-----VPDWGDSIEVKNEDQIQGLHQACQLARHV 107
Query: 607 LDEAARVCDVGVSTDEIDRVVHEACIERGMLP 702
L A + V ++T+EID +VH I P
Sbjct: 108 LLLAGKSLKVDMTTEEIDALVHREIISHNAYP 139
>AY374142-1|AAR27795.1| 335|Homo sapiens mitochondrial methionine
aminopeptidase 1 protein.
Length = 335
Score = 49.2 bits (112), Expect = 1e-05
Identities = 29/92 (31%), Positives = 44/92 (47%)
Frame = +1
Query: 427 PFPAGPKRTVPPHIGRPDYADHPTGFPASEYAAKGSAQIKILDDEEIEGMRVACRLGREV 606
P VP HI +PDY TG I++ ++++I+G+ AC+L R V
Sbjct: 55 PAAVSSAHPVPKHIKKPDYVT--TGI-----VPDWGDSIEVKNEDQIQGLHQACQLARHV 107
Query: 607 LDEAARVCDVGVSTDEIDRVVHEACIERGMLP 702
L A + V ++T+EID +VH I P
Sbjct: 108 LLLAGKSLKVDMTTEEIDALVHREIISHNAYP 139
>U47924-15|AAB51321.1| 1190|Homo sapiens DRPLA protein.
Length = 1190
Score = 31.9 bits (69), Expect = 2.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 388 NPWPSYTFTGKLRPFPAGPKRTVPPHIGRPDYAD-HPTGFPASEYAAKGSA 537
+P+ G LRP+P GP PPH + Y+ P G P S + S+
Sbjct: 528 HPYAMSPSLGSLRPYPPGPAHLPPPH-SQVSYSQAGPNGPPVSSSSNSSSS 577
>U23851-1|AAB50276.1| 1184|Homo sapiens atrophin-1 protein.
Length = 1184
Score = 31.9 bits (69), Expect = 2.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 388 NPWPSYTFTGKLRPFPAGPKRTVPPHIGRPDYAD-HPTGFPASEYAAKGSA 537
+P+ G LRP+P GP PPH + Y+ P G P S + S+
Sbjct: 522 HPYAMSPSLGSLRPYPPGPAHLPPPH-SQVSYSQAGPNGPPVSSSSNSSSS 571
>D38529-1|BAA07534.1| 1182|Homo sapiens DRPLA protein protein.
Length = 1182
Score = 31.9 bits (69), Expect = 2.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 388 NPWPSYTFTGKLRPFPAGPKRTVPPHIGRPDYAD-HPTGFPASEYAAKGSA 537
+P+ G LRP+P GP PPH + Y+ P G P S + S+
Sbjct: 523 HPYAMSPSLGSLRPYPPGPAHLPPPH-SQVSYSQAGPNGPPVSSSSNSSSS 572
>D31840-1|BAA06626.1| 1185|Homo sapiens DRPLA protein.
Length = 1185
Score = 31.9 bits (69), Expect = 2.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 388 NPWPSYTFTGKLRPFPAGPKRTVPPHIGRPDYAD-HPTGFPASEYAAKGSA 537
+P+ G LRP+P GP PPH + Y+ P G P S + S+
Sbjct: 523 HPYAMSPSLGSLRPYPPGPAHLPPPH-SQVSYSQAGPNGPPVSSSSNSSSS 572
>BC051795-1|AAH51795.1| 1191|Homo sapiens atrophin 1 protein.
Length = 1191
Score = 31.9 bits (69), Expect = 2.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 388 NPWPSYTFTGKLRPFPAGPKRTVPPHIGRPDYAD-HPTGFPASEYAAKGSA 537
+P+ G LRP+P GP PPH + Y+ P G P S + S+
Sbjct: 529 HPYAMSPSLGSLRPYPPGPAHLPPPH-SQVSYSQAGPNGPPVSSSSNSSSS 578
>AB209345-1|BAD92582.1| 774|Homo sapiens atrophin-1 variant
protein.
Length = 774
Score = 31.9 bits (69), Expect = 2.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 388 NPWPSYTFTGKLRPFPAGPKRTVPPHIGRPDYAD-HPTGFPASEYAAKGSA 537
+P+ G LRP+P GP PPH + Y+ P G P S + S+
Sbjct: 112 HPYAMSPSLGSLRPYPPGPAHLPPPH-SQVSYSQAGPNGPPVSSSSNSSSS 161
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,848,597
Number of Sequences: 237096
Number of extensions: 2102963
Number of successful extensions: 4900
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4895
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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