Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16f03
(349 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006624-3|AAF39786.2| 301|Caenorhabditis elegans Hypothetical ... 30 0.40
U80031-3|AAB37613.1| 524|Caenorhabditis elegans Hypothetical pr... 30 0.52
AF025452-4|AAB70945.1| 642|Caenorhabditis elegans Hypothetical ... 30 0.52
Z70038-8|CAA93887.2| 618|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z68319-6|CAA92704.2| 618|Caenorhabditis elegans Hypothetical pr... 29 1.2
AY220985-1|AAO65265.1| 618|Caenorhabditis elegans putative RNA ... 29 1.2
U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical pr... 28 1.6
U61948-5|AAB03149.2| 509|Caenorhabditis elegans Hypothetical pr... 28 2.1
U80031-5|AAB37615.1| 547|Caenorhabditis elegans Hypothetical pr... 27 3.7
U40410-4|AAA81393.1| 259|Caenorhabditis elegans Hypothetical pr... 27 3.7
U58737-5|ABC71794.1| 1294|Caenorhabditis elegans Trehalose 6-pho... 27 4.9
U58737-4|AAK39395.3| 1331|Caenorhabditis elegans Trehalose 6-pho... 27 4.9
AJ811573-1|CAH18875.1| 1331|Caenorhabditis elegans putative treh... 27 4.9
AJ512332-1|CAD54506.1| 1331|Caenorhabditis elegans trehalose-6-p... 27 4.9
X76114-1|CAA53720.1| 290|Caenorhabditis elegans Oxoglutarate/ma... 26 8.5
U23525-8|AAC46570.1| 290|Caenorhabditis elegans Hypothetical pr... 26 8.5
CU457740-8|CAM36338.1| 362|Caenorhabditis elegans Hypothetical ... 26 8.5
>AC006624-3|AAF39786.2| 301|Caenorhabditis elegans Hypothetical
protein C53D5.4 protein.
Length = 301
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -3
Query: 332 QLFIRHSLAHVFSSPHLYLAHEVSHWSQPNCEHKRAVQQSLAKMAFIPRRNDN 174
++F ++ H P LY H + H SQ + Q++LA +A +P+ +DN
Sbjct: 150 KMFGAGNIPHFQPPPDLYQHHHIPHTSQ------QVAQENLAMLANVPKLDDN 196
>U80031-3|AAB37613.1| 524|Caenorhabditis elegans Hypothetical
protein B0554.4 protein.
Length = 524
Score = 29.9 bits (64), Expect = 0.52
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 256 GVNQTVSINAQCNKASPRWHLF--LGGMTIIIPV 161
G +QTV+INA+C+ W+ LGG+ + P+
Sbjct: 482 GFDQTVTINAECSNVDSIWYYISELGGLPVKKPL 515
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 247 QTVSINAQCNKASPRWH 197
QTV+INA+CN A W+
Sbjct: 146 QTVTINAECNSADMVWY 162
>AF025452-4|AAB70945.1| 642|Caenorhabditis elegans Hypothetical
protein B0454.8 protein.
Length = 642
Score = 29.9 bits (64), Expect = 0.52
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 247 QTVSINAQCNKASPRWH 197
QTV+INAQCN A +W+
Sbjct: 128 QTVTINAQCNTADMKWN 144
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 247 QTVSINAQCNKASPRWH 197
QTV+INAQCN A W+
Sbjct: 248 QTVTINAQCNTADMIWN 264
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 247 QTVSINAQCNKASPRWH 197
QTV+INAQCN A W+
Sbjct: 368 QTVTINAQCNTADMIWN 384
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 247 QTVSINAQCNKASPRWH 197
QTV+INAQCN A W+
Sbjct: 488 QTVTINAQCNTADMIWN 504
>Z70038-8|CAA93887.2| 618|Caenorhabditis elegans Hypothetical
protein ZK1067.6 protein.
Length = 618
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -3
Query: 344 FLRNQLFIRHSLAHVFSSPHLYLAH-EVSHWSQPNCEHKRAVQQSLAKM 201
F RN+L + H L H + HLY + E Q E A+ +++ M
Sbjct: 99 FARNELCVPHPLHHYYDIKHLYYGNQEEDGMEQEEIEDDVAIARAILDM 147
>Z68319-6|CAA92704.2| 618|Caenorhabditis elegans Hypothetical
protein ZK1067.6 protein.
Length = 618
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -3
Query: 344 FLRNQLFIRHSLAHVFSSPHLYLAH-EVSHWSQPNCEHKRAVQQSLAKM 201
F RN+L + H L H + HLY + E Q E A+ +++ M
Sbjct: 99 FARNELCVPHPLHHYYDIKHLYYGNQEEDGMEQEEIEDDVAIARAILDM 147
>AY220985-1|AAO65265.1| 618|Caenorhabditis elegans putative RNA
binding protein SYM-2 protein.
Length = 618
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -3
Query: 344 FLRNQLFIRHSLAHVFSSPHLYLAH-EVSHWSQPNCEHKRAVQQSLAKM 201
F RN+L + H L H + HLY + E Q E A+ +++ M
Sbjct: 99 FARNELCVPHPLHHYYDIKHLYYGNQEEDGMEQEEIEDDVAIARAILDM 147
>U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical
protein T20F5.6 protein.
Length = 794
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -1
Query: 238 SINAQCNKASPRWHLFLGGMTIIIPVCVQ-LRLSIVCCGSGLRSNF 104
+I QC K FLGG T+I P C Q R S+ + +NF
Sbjct: 138 TICLQCIKKLLNTRTFLGGNTVICPSCRQNTRYSLTTPADKIPTNF 183
>U61948-5|AAB03149.2| 509|Caenorhabditis elegans Hypothetical
protein C46A5.2 protein.
Length = 509
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 55 NGFILGDSFQICYGISQNY 111
NG+ D FQ CYG SQ Y
Sbjct: 233 NGYTCTDLFQTCYGGSQTY 251
>U80031-5|AAB37615.1| 547|Caenorhabditis elegans Hypothetical
protein B0554.2 protein.
Length = 547
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -1
Query: 247 QTVSINAQCNKASPRWHLF--LGGMTI 173
QTV+INA+C+ W+ +GG TI
Sbjct: 150 QTVTINAECSSVDMVWYYVTTIGGQTI 176
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 247 QTVSINAQCNKASPRWH--LFLGGMTIIIPV 161
QTV+INA+C+ W+ + G T+ +P+
Sbjct: 265 QTVAINAECSSVDSIWNYVTVVAGQTVKVPM 295
>U40410-4|AAA81393.1| 259|Caenorhabditis elegans Hypothetical
protein C54G7.1 protein.
Length = 259
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/14 (78%), Positives = 11/14 (78%), Gaps = 2/14 (14%)
Frame = -3
Query: 188 RRNDNYHSCL--CP 153
RRND YHSCL CP
Sbjct: 72 RRNDEYHSCLQRCP 85
>U58737-5|ABC71794.1| 1294|Caenorhabditis elegans Trehalose
6-phosphate synthaseprotein 1, isoform b protein.
Length = 1294
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 334 INYLFVIHLPMYSRRHTFIWL 272
+NYLF I+ SR FIW+
Sbjct: 461 VNYLFAINAARNSRAQDFIWI 481
>U58737-4|AAK39395.3| 1331|Caenorhabditis elegans Trehalose
6-phosphate synthaseprotein 1, isoform a protein.
Length = 1331
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 334 INYLFVIHLPMYSRRHTFIWL 272
+NYLF I+ SR FIW+
Sbjct: 498 VNYLFAINAARNSRAQDFIWI 518
>AJ811573-1|CAH18875.1| 1331|Caenorhabditis elegans putative
trehalose 6-phosphatesynthase protein.
Length = 1331
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 334 INYLFVIHLPMYSRRHTFIWL 272
+NYLF I+ SR FIW+
Sbjct: 498 VNYLFAINAARNSRAQDFIWI 518
>AJ512332-1|CAD54506.1| 1331|Caenorhabditis elegans
trehalose-6-phosphate synthase protein.
Length = 1331
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 334 INYLFVIHLPMYSRRHTFIWL 272
+NYLF I+ SR FIW+
Sbjct: 498 VNYLFAINAARNSRAQDFIWI 518
>X76114-1|CAA53720.1| 290|Caenorhabditis elegans
Oxoglutarate/malate carrier protein protein.
Length = 290
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 210 EALLHCAFMLTVWLTPMAYFMSQIKVWRR 296
+ +L C FM T L PM +F I W R
Sbjct: 236 KGILDC-FMFTAKLGPMGFFKGFIPAWAR 263
>U23525-8|AAC46570.1| 290|Caenorhabditis elegans Hypothetical
protein K11G12.5 protein.
Length = 290
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 210 EALLHCAFMLTVWLTPMAYFMSQIKVWRR 296
+ +L C FM T L PM +F I W R
Sbjct: 236 KGILDC-FMFTAKLGPMGFFKGFIPAWAR 263
>CU457740-8|CAM36338.1| 362|Caenorhabditis elegans Hypothetical
protein C50E10.8 protein.
Length = 362
Score = 25.8 bits (54), Expect = 8.5
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = -1
Query: 229 AQCNKASPRWHLFLGG------MTIIIPVCVQLRLSIVCCGSGLRSNFVRFRNIFETSLL 68
A+ + S W LFLGG M+I+ + L + VC ++ N+ R + +LL
Sbjct: 113 ARLDSISSAWPLFLGGALTWYYMSILTTCLITLSIERVCASFFIK-NYENTRRTYLLALL 171
Query: 67 I 65
I
Sbjct: 172 I 172
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,762,526
Number of Sequences: 27780
Number of extensions: 151201
Number of successful extensions: 388
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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