Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16f02
         (636 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    24   3.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   4.6  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   6.1  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   6.1  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = -2

Query: 230 GRCPPSAGLCSSTSTSTAPRHDVARSGRGPPPRSAAASSRCRWTCRADASCRSHSRIP 57
           G+   SA L SS +   A      R   G P  S ++SSR   +C   +S  +HS  P
Sbjct: 14  GKRSSSASLRSSAANFAA----WLRGNSGSPLSSISSSSRNSSSCNNSSSSGTHSDRP 67


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 152 GRGPPPRSAAASSRC 108
           G GPPP  + + SRC
Sbjct: 765 GGGPPPDGSGSGSRC 779


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 395 DGKWCRRAGGRCWWTSRSSL 336
           D K C RA  RC+   RSS+
Sbjct: 392 DTKICSRANARCYEQIRSSI 411


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 395 DGKWCRRAGGRCWWTSRSSL 336
           D K C RA  RC+   RSS+
Sbjct: 392 DTKICSRANARCYEQIRSSI 411


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,038
Number of Sequences: 2352
Number of extensions: 7012
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)