Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16e22
(642 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-... 281 1e-75
BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C (a... 281 1e-75
BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C (a... 281 1e-75
AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C (a... 281 1e-75
AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5 ... 281 1e-75
CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein. 279 8e-75
M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-... 180 3e-45
CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein. 180 3e-45
BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C (a... 180 3e-45
BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C (a... 180 3e-45
BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C (a... 180 3e-45
AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C (a... 180 3e-45
M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-... 159 8e-39
AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C su... 159 8e-39
AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein. 159 8e-39
BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C (a... 81 9e-26
BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C (a... 81 9e-26
AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C (a... 81 9e-26
AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein. 81 9e-26
L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-... 84 5e-16
BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C (a... 84 5e-16
BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C (a... 84 5e-16
AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C (a... 84 5e-16
AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C (a... 84 5e-16
AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3 ... 83 8e-16
BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein pr... 45 2e-04
BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe... 45 2e-04
AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe... 45 2e-04
AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein. 45 2e-04
AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint p... 45 2e-04
AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint p... 45 2e-04
AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint p... 45 2e-04
AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein. 45 2e-04
AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolo... 45 2e-04
AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein prot... 45 2e-04
AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint p... 45 2e-04
BC018184-1|AAH18184.1| 975|Homo sapiens CTF18, chromosome trans... 44 5e-04
BC006437-1|AAH06437.1| 1016|Homo sapiens CHTF18 protein protein. 44 5e-04
BC006278-1|AAH06278.2| 975|Homo sapiens CTF18, chromosome trans... 44 5e-04
AL031033-2|CAB53056.1| 260|Homo sapiens protein ( Human DNA seq... 44 5e-04
AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with holl... 44 5e-04
AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase interac... 40 0.006
AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase interac... 40 0.006
AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase interac... 40 0.006
AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL... 40 0.006
AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase interac... 40 0.006
AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase interac... 38 0.023
BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase interac... 37 0.070
AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase interac... 37 0.070
L23320-1|AAA16121.1| 1148|Homo sapiens replication factor C larg... 36 0.12
BC051786-1|AAH51786.1| 1148|Homo sapiens RFC1 protein protein. 36 0.12
BC051751-1|AAH51751.1| 1147|Homo sapiens replication factor C (a... 36 0.12
BC035297-1|AAH35297.1| 1148|Homo sapiens replication factor C (a... 36 0.12
AY600371-1|AAS94325.1| 1147|Homo sapiens replication factor C (a... 36 0.12
X76040-1|CAA53625.1| 937|Homo sapiens Lon protease-like protein... 36 0.16
X74215-1|CAA52291.1| 845|Homo sapiens Lon protease-like protein... 36 0.16
U02389-1|AAA61616.1| 962|Homo sapiens hLON ATP-dependent protea... 36 0.16
M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human immunodef... 36 0.16
CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein. 36 0.16
BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein. 36 0.16
BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome, ma... 36 0.16
BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome, ma... 36 0.16
BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome, ma... 36 0.16
BC004934-1|AAH04934.1| 517|Homo sapiens Unknown (protein for IM... 36 0.16
BC000235-1|AAH00235.1| 959|Homo sapiens lon peptidase 1, mitoch... 36 0.16
AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase s... 36 0.16
AK096626-1|BAC04829.1| 895|Homo sapiens protein ( Homo sapiens ... 36 0.16
AF059309-1|AAD24414.1| 959|Homo sapiens LON protease protein. 36 0.16
BC109218-1|AAI09219.1| 848|Homo sapiens LONP1 protein protein. 35 0.21
CR456466-1|CAG30352.1| 1211|Homo sapiens dJ402G11.8 protein. 34 0.37
BC150137-1|AAI50138.1| 1165|Homo sapiens MOV10L1 protein protein. 34 0.37
BC110434-1|AAI10435.1| 598|Homo sapiens LONP2 protein protein. 34 0.37
BC093912-1|AAH93912.1| 852|Homo sapiens lon peptidase 2, peroxi... 34 0.37
BC093910-1|AAH93910.1| 852|Homo sapiens lon peptidase 2, peroxi... 34 0.37
BC043423-1|AAH43423.1| 301|Homo sapiens ABCB6 protein protein. 34 0.37
BC000559-1|AAH00559.1| 842|Homo sapiens ATP-binding cassette, s... 34 0.37
AL834201-1|CAD38889.1| 715|Homo sapiens hypothetical protein pr... 34 0.37
AL034546-1|CAI23226.1| 1211|Homo sapiens protein ( Human DNA seq... 34 0.37
AL022328-2|CAB63041.1| 417|Homo sapiens protein ( Human DNA seq... 34 0.37
AL022328-1|CAI42752.1| 1211|Homo sapiens protein ( Human DNA seq... 34 0.37
AK172812-1|BAD18782.1| 571|Homo sapiens protein ( Homo sapiens ... 34 0.37
AK074775-1|BAC11201.1| 852|Homo sapiens protein ( Homo sapiens ... 34 0.37
AK057026-1|BAB71347.1| 766|Homo sapiens protein ( Homo sapiens ... 34 0.37
AK027666-1|BAB55278.1| 581|Homo sapiens protein ( Homo sapiens ... 34 0.37
AJ548761-1|CAD68987.1| 852|Homo sapiens peroxisomal lon proteas... 34 0.37
AJ289233-1|CAB95766.2| 842|Homo sapiens ABC transporter umat pr... 34 0.37
AF308472-1|AAG33617.1| 896|Homo sapiens ATP-binding cassette ha... 34 0.37
AF285604-1|AAK31983.1| 1211|Homo sapiens MOV10-like 1 protein. 34 0.37
AF076775-1|AAF75107.1| 842|Homo sapiens MT-ABC transporter prot... 34 0.37
AF070598-1|AAC28653.1| 511|Homo sapiens ABC transporter protein. 34 0.37
AB039371-1|BAA96733.1| 842|Homo sapiens mitochondrial ABC trans... 34 0.37
Z22642-1|CAA80355.1| 1147|Homo sapiens PO-GA protein. 34 0.49
AF040250-1|AAB99788.1| 1147|Homo sapiens DNA binding protein pro... 34 0.49
BC094881-1|AAH94881.1| 1163|Homo sapiens HELZ protein protein. 33 0.65
BC047879-1|AAH47879.1| 577|Homo sapiens SHQ1 homolog (S. cerevi... 33 0.65
BC039830-1|AAH39830.1| 577|Homo sapiens SHQ1 homolog (S. cerevi... 33 0.65
BC032671-1|AAH32671.1| 577|Homo sapiens SHQ1 homolog (S. cerevi... 33 0.65
BC025270-1|AAH25270.1| 577|Homo sapiens SHQ1 homolog (S. cerevi... 33 0.65
BC017274-1|AAH17274.1| 577|Homo sapiens SHQ1 homolog (S. cerevi... 33 0.65
BC017204-1|AAH17204.1| 577|Homo sapiens SHQ1 homolog (S. cerevi... 33 0.65
BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associa... 33 0.65
AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility as... 33 0.65
AK024656-1|BAB14947.1| 352|Homo sapiens protein ( Homo sapiens ... 33 0.65
AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens ... 33 0.65
AK022797-1|BAB14248.1| 801|Homo sapiens protein ( Homo sapiens ... 33 0.65
AK001401-1|BAA91669.1| 519|Homo sapiens protein ( Homo sapiens ... 33 0.65
AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protei... 33 0.65
Y18418-1|CAB46271.1| 456|Homo sapiens erythrocyte cytosolic pro... 33 0.86
DQ469310-1|ABF13334.1| 386|Homo sapiens RUVBL1-FK protein. 33 0.86
BT007057-1|AAP35706.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 33 0.86
BC073998-1|AAH73998.1| 287|Homo sapiens ATAD1 protein protein. 33 0.86
BC063530-1|AAH63530.1| 330|Homo sapiens ATAD1 protein protein. 33 0.86
BC012886-1|AAH12886.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 33 0.86
BC002993-1|AAH02993.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 33 0.86
AL391244-1|CAI22656.1| 473|Homo sapiens ATPase family, AAA doma... 33 0.86
AL157945-1|CAI22067.1| 473|Homo sapiens ATPase family, AAA doma... 33 0.86
AL133327-1|CAI16701.1| 361|Homo sapiens ATPase family, AAA doma... 33 0.86
AK222575-1|BAD96295.1| 456|Homo sapiens TATA binding protein in... 33 0.86
AK222563-1|BAD96283.1| 456|Homo sapiens TATA binding protein in... 33 0.86
AK075223-1|BAC11482.1| 361|Homo sapiens protein ( Homo sapiens ... 33 0.86
AJ010058-1|CAA08986.1| 456|Homo sapiens Nuclear matrix protein ... 33 0.86
AF380344-1|AAM45570.1| 456|Homo sapiens pontin 52 protein. 33 0.86
AF099084-1|AAD04427.1| 456|Homo sapiens Pontin52 protein. 33 0.86
AF070735-1|AAC77819.1| 456|Homo sapiens RuvB-like protein RUVBL... 33 0.86
AB012122-1|BAA28169.1| 456|Homo sapiens TIP49 protein. 33 0.86
BC018701-1|AAH18701.1| 648|Homo sapiens ATPase family, AAA doma... 33 1.1
BC002542-1|AAH02542.1| 648|Homo sapiens ATPase family, AAA doma... 33 1.1
AL157945-2|CAI22068.1| 648|Homo sapiens ATPase family, AAA doma... 33 1.1
AK024028-1|BAB14787.1| 480|Homo sapiens protein ( Homo sapiens ... 33 1.1
AB033099-1|BAA86587.1| 606|Homo sapiens KIAA1273 protein protein. 33 1.1
BC009312-1|AAH09312.1| 1003|Homo sapiens Mov10, Moloney leukemia... 32 1.5
BC004499-1|AAH04499.2| 601|Homo sapiens MOV10 protein protein. 32 1.5
BC002548-1|AAH02548.1| 1003|Homo sapiens Mov10, Moloney leukemia... 32 1.5
AL603832-3|CAI14056.1| 947|Homo sapiens Mov10, Moloney leukemia... 32 1.5
AL603832-2|CAI14055.1| 1003|Homo sapiens Mov10, Moloney leukemia... 32 1.5
AK074174-1|BAB85000.1| 925|Homo sapiens FLJ00247 protein protein. 32 1.5
AB046851-1|BAB13457.1| 1032|Homo sapiens KIAA1631 protein protein. 32 1.5
BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein. 32 2.0
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 32 2.0
BC113656-1|AAI13657.1| 1390|Homo sapiens ATPase family, AAA doma... 32 2.0
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 32 2.0
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 32 2.0
BC007123-1|AAH07123.1| 939|Homo sapiens ATAD2 protein protein. 32 2.0
AY598335-1|AAT06746.1| 1390|Homo sapiens L16 protein. 32 2.0
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 32 2.0
AK097133-1|BAC04959.1| 978|Homo sapiens protein ( Homo sapiens ... 32 2.0
AK094821-1|BAC04429.1| 574|Homo sapiens protein ( Homo sapiens ... 32 2.0
AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens ... 32 2.0
AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing prot... 32 2.0
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 32 2.0
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 32 2.0
D29677-1|BAA06147.2| 1943|Homo sapiens KIAA0054 protein. 31 2.6
BC130582-1|AAI30583.1| 1942|Homo sapiens helicase with zinc fing... 31 2.6
BC063607-1|AAH63607.1| 586|Homo sapiens ATAD3A protein protein. 31 2.6
BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein. 31 2.6
BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-l... 31 2.6
BC033109-1|AAH33109.1| 586|Homo sapiens ATAD3A protein protein. 31 2.6
BC014101-1|AAH14101.1| 586|Homo sapiens ATAD3A protein protein. 31 2.6
BC011814-1|AAH11814.1| 586|Homo sapiens ATAD3A protein protein. 31 2.6
BC007803-1|AAH07803.1| 586|Homo sapiens ATAD3A protein protein. 31 2.6
AL645728-11|CAI22954.1| 634|Homo sapiens ATPase family, AAA dom... 31 2.6
AL645728-10|CAI22955.1| 586|Homo sapiens ATPase family, AAA dom... 31 2.6
AL645728-9|CAI22953.1| 571|Homo sapiens ATPase family, AAA doma... 31 2.6
AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens ... 31 2.6
AK091144-1|BAC03595.1| 634|Homo sapiens protein ( Homo sapiens ... 31 2.6
AK001571-1|BAA91764.1| 586|Homo sapiens protein ( Homo sapiens ... 31 2.6
AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associa... 31 2.6
AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associa... 31 2.6
D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42 pr... 31 4.6
CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein. 31 4.6
BT007259-1|AAP35923.1| 665|Homo sapiens kinesin-like 4 protein. 31 4.6
BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome, ma... 31 4.6
BC106017-1|AAI06018.1| 867|Homo sapiens SETX protein protein. 31 4.6
BC078166-1|AAH78166.1| 917|Homo sapiens SETX protein protein. 31 4.6
BC032622-1|AAH32622.2| 1030|Homo sapiens SETX protein protein. 31 4.6
BC032600-1|AAH32600.1| 828|Homo sapiens SETX protein protein. 31 4.6
BC028155-1|AAH28155.1| 665|Homo sapiens kinesin family member 2... 31 4.6
BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome, ma... 31 4.6
BC004352-1|AAH04352.1| 665|Homo sapiens kinesin family member 2... 31 4.6
AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor aprax... 31 4.6
AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein. 31 4.6
AL159997-5|CAI40857.1| 948|Homo sapiens senataxin protein. 31 4.6
AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein. 31 4.6
AK223431-1|BAD97151.1| 665|Homo sapiens kinesin family member 2... 31 4.6
AK001456-1|BAA91701.1| 828|Homo sapiens protein ( Homo sapiens ... 31 4.6
AF343078-1|AAK38647.1| 578|Homo sapiens TOB3 protein. 31 4.6
AF136523-1|AAD28285.1| 1321|Homo sapiens bile salt export pump p... 31 4.6
AF091582-1|AAC77455.1| 1321|Homo sapiens bile salt export pump p... 31 4.6
AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulato... 31 4.6
AC069137-4|AAY24100.1| 451|Homo sapiens unknown protein. 31 4.6
AC002301-2|AAC08709.1| 198|Homo sapiens Similar to kinesin-like... 31 4.6
AB017430-1|BAA33019.2| 665|Homo sapiens kinesin-like DNA bindin... 31 4.6
AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein. 31 4.6
U96131-1|AAB64095.1| 432|Homo sapiens HPV16 E1 protein binding ... 30 6.1
L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulat... 30 6.1
CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein. 30 6.1
CR456744-1|CAG33025.1| 432|Homo sapiens TRIP13 protein. 30 6.1
BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome, ma... 30 6.1
BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome, ma... 30 6.1
BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome, ma... 30 6.1
BC024032-1|AAH24032.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 30 6.1
BC023507-1|AAH23507.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 30 6.1
BC019294-1|AAH19294.1| 432|Homo sapiens thyroid hormone recepto... 30 6.1
BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome, ma... 30 6.1
BC007795-1|AAH07795.1| 740|Homo sapiens YME1-like 1 (S. cerevis... 30 6.1
BC007500-1|AAH07500.1| 419|Homo sapiens BCS1-like (yeast) protein. 30 6.1
BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome, ma... 30 6.1
BC000416-1|AAH00416.1| 419|Homo sapiens BCS1-like (yeast) protein. 30 6.1
BC000404-1|AAH00404.1| 432|Homo sapiens thyroid hormone recepto... 30 6.1
AY358484-1|AAQ88848.1| 716|Homo sapiens YME1L1 protein. 30 6.1
AL162272-2|CAI12217.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 30 6.1
AL162272-1|CAC19650.2| 773|Homo sapiens YME1-like 1 (S. cerevis... 30 6.1
AL160291-4|CAI16906.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 30 6.1
AL160291-3|CAI16907.1| 773|Homo sapiens YME1-like 1 (S. cerevis... 30 6.1
AK223518-1|BAD97238.1| 419|Homo sapiens BCS1-like variant protein. 30 6.1
AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase s... 30 6.1
AJ132637-1|CAB51858.1| 716|Homo sapiens ATP-dependent metallopr... 30 6.1
AF516670-1|AAN05490.1| 419|Homo sapiens BCS1-like protein protein. 30 6.1
AF346835-1|AAK29417.1| 419|Homo sapiens BCS1 protein. 30 6.1
AF151782-1|AAK57555.1| 773|Homo sapiens ATP-dependent metallopr... 30 6.1
AF038195-1|AAB97365.1| 419|Homo sapiens unknown protein. 30 6.1
AF026849-1|AAD08638.1| 419|Homo sapiens h-bcs1 protein. 30 6.1
U27515-1|AAC99817.1| 418|Homo sapiens MIP224 protein. 30 8.0
BT007232-1|AAP35896.1| 418|Homo sapiens proteasome (prosome, ma... 30 8.0
BC014488-1|AAH14488.1| 418|Homo sapiens proteasome (prosome, ma... 30 8.0
BC010396-1|AAH10396.1| 387|Homo sapiens proteasome (prosome, ma... 30 8.0
BC000343-1|AAH00343.1| 418|Homo sapiens proteasome (prosome, ma... 30 8.0
AF020736-1|AAC32612.1| 418|Homo sapiens ATPase homolog protein. 30 8.0
AC007842-2|AAD39267.1| 418|Homo sapiens ATPase homolog [Homo sa... 30 8.0
AB201715-1|BAE46995.1| 2649|Homo sapiens PPAR gamma DBD-interact... 30 8.0
>L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-kDa
subunit protein.
Length = 340
Score = 281 bits (690), Expect = 1e-75
Identities = 128/167 (76%), Positives = 147/167 (88%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQM 319
+NLPWVEKYRP+ L+DL+SH DI+ TI +F+ E++LPHLL YGPPGTGKTSTILACAKQ+
Sbjct: 18 RNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQL 77
Query: 320 YTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNA 499
Y ++F SMVLELNASDDRGI I+RG ILSFASTRTIFK G KL+ILDEADAMT DAQNA
Sbjct: 78 YKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQNA 137
Query: 500 LRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVP 640
LRR+IEK+TEN RFC+ICNYL KIIPALQSRCTRFRF PL + +VP
Sbjct: 138 LRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVP 184
>BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 281 bits (690), Expect = 1e-75
Identities = 128/167 (76%), Positives = 147/167 (88%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQM 319
+NLPWVEKYRP+ L+DL+SH DI+ TI +F+ E++LPHLL YGPPGTGKTSTILACAKQ+
Sbjct: 18 RNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQL 77
Query: 320 YTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNA 499
Y ++F SMVLELNASDDRGI I+RG ILSFASTRTIFK G KL+ILDEADAMT DAQNA
Sbjct: 78 YKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQNA 137
Query: 500 LRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVP 640
LRR+IEK+TEN RFC+ICNYL KIIPALQSRCTRFRF PL + +VP
Sbjct: 138 LRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVP 184
>BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 281 bits (690), Expect = 1e-75
Identities = 128/167 (76%), Positives = 147/167 (88%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQM 319
+NLPWVEKYRP+ L+DL+SH DI+ TI +F+ E++LPHLL YGPPGTGKTSTILACAKQ+
Sbjct: 18 RNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQL 77
Query: 320 YTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNA 499
Y ++F SMVLELNASDDRGI I+RG ILSFASTRTIFK G KL+ILDEADAMT DAQNA
Sbjct: 78 YKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQNA 137
Query: 500 LRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVP 640
LRR+IEK+TEN RFC+ICNYL KIIPALQSRCTRFRF PL + +VP
Sbjct: 138 LRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVP 184
>AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 281 bits (690), Expect = 1e-75
Identities = 128/167 (76%), Positives = 147/167 (88%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQM 319
+NLPWVEKYRP+ L+DL+SH DI+ TI +F+ E++LPHLL YGPPGTGKTSTILACAKQ+
Sbjct: 18 RNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQL 77
Query: 320 YTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNA 499
Y ++F SMVLELNASDDRGI I+RG ILSFASTRTIFK G KL+ILDEADAMT DAQNA
Sbjct: 78 YKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQNA 137
Query: 500 LRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVP 640
LRR+IEK+TEN RFC+ICNYL KIIPALQSRCTRFRF PL + +VP
Sbjct: 138 LRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVP 184
>AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5
isoform 1 variant protein.
Length = 351
Score = 281 bits (690), Expect = 1e-75
Identities = 128/167 (76%), Positives = 147/167 (88%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQM 319
+NLPWVEKYRP+ L+DL+SH DI+ TI +F+ E++LPHLL YGPPGTGKTSTILACAKQ+
Sbjct: 32 RNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQL 91
Query: 320 YTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNA 499
Y ++F SMVLELNASDDRGI I+RG ILSFASTRTIFK G KL+ILDEADAMT DAQNA
Sbjct: 92 YKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQNA 151
Query: 500 LRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVP 640
LRR+IEK+TEN RFC+ICNYL KIIPALQSRCTRFRF PL + +VP
Sbjct: 152 LRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVP 198
>CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein.
Length = 340
Score = 279 bits (683), Expect = 8e-75
Identities = 127/167 (76%), Positives = 146/167 (87%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQM 319
+NLPWVEKYRP+ L+DL+SH DI+ TI +F+ E++LPHLL YGPPGTGKTSTILACAKQ+
Sbjct: 18 RNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQL 77
Query: 320 YTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNA 499
Y ++F SMVLELNASDDRGI I+RG ILSFASTRTIFK G KL+ILDEADAMT DAQNA
Sbjct: 78 YKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQNA 137
Query: 500 LRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVP 640
LR +IEK+TEN RFC+ICNYL KIIPALQSRCTRFRF PL + +VP
Sbjct: 138 LRGVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVP 184
>M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-kDa
subunit protein.
Length = 363
Score = 180 bits (439), Expect = 3e-45
Identities = 88/178 (49%), Positives = 128/178 (71%), Gaps = 12/178 (6%)
Frame = +2
Query: 122 TVGETGQN-----LPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGK 286
+ G +G+N +PWVEKYRPK +D++ ++++ + + ++ LP+LLFYGPPGTGK
Sbjct: 25 SAGSSGENKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGK 84
Query: 287 TSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFA-----STRTIFKAGP-- 445
TSTILA A++++ P+ F VLELNASD+RGI +VR ++ +FA +R+ K P
Sbjct: 85 TSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPF 144
Query: 446 KLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPL 619
K++ILDEAD+MT+ AQ ALRR +EK ++ RFC+ICNY+ +II L SRC++FRF PL
Sbjct: 145 KIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPL 202
>CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein.
Length = 363
Score = 180 bits (439), Expect = 3e-45
Identities = 88/178 (49%), Positives = 128/178 (71%), Gaps = 12/178 (6%)
Frame = +2
Query: 122 TVGETGQN-----LPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGK 286
+ G +G+N +PWVEKYRPK +D++ ++++ + + ++ LP+LLFYGPPGTGK
Sbjct: 25 SAGSSGENKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGK 84
Query: 287 TSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFA-----STRTIFKAGP-- 445
TSTILA A++++ P+ F VLELNASD+RGI +VR ++ +FA +R+ K P
Sbjct: 85 TSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPF 144
Query: 446 KLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPL 619
K++ILDEAD+MT+ AQ ALRR +EK ++ RFC+ICNY+ +II L SRC++FRF PL
Sbjct: 145 KIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPL 202
>BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 180 bits (439), Expect = 3e-45
Identities = 88/178 (49%), Positives = 128/178 (71%), Gaps = 12/178 (6%)
Frame = +2
Query: 122 TVGETGQN-----LPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGK 286
+ G +G+N +PWVEKYRPK +D++ ++++ + + ++ LP+LLFYGPPGTGK
Sbjct: 25 SAGSSGENKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGK 84
Query: 287 TSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFA-----STRTIFKAGP-- 445
TSTILA A++++ P+ F VLELNASD+RGI +VR ++ +FA +R+ K P
Sbjct: 85 TSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPF 144
Query: 446 KLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPL 619
K++ILDEAD+MT+ AQ ALRR +EK ++ RFC+ICNY+ +II L SRC++FRF PL
Sbjct: 145 KIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPL 202
>BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 180 bits (439), Expect = 3e-45
Identities = 88/178 (49%), Positives = 128/178 (71%), Gaps = 12/178 (6%)
Frame = +2
Query: 122 TVGETGQN-----LPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGK 286
+ G +G+N +PWVEKYRPK +D++ ++++ + + ++ LP+LLFYGPPGTGK
Sbjct: 25 SAGSSGENKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGK 84
Query: 287 TSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFA-----STRTIFKAGP-- 445
TSTILA A++++ P+ F VLELNASD+RGI +VR ++ +FA +R+ K P
Sbjct: 85 TSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPF 144
Query: 446 KLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPL 619
K++ILDEAD+MT+ AQ ALRR +EK ++ RFC+ICNY+ +II L SRC++FRF PL
Sbjct: 145 KIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPL 202
>BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 180 bits (439), Expect = 3e-45
Identities = 88/178 (49%), Positives = 128/178 (71%), Gaps = 12/178 (6%)
Frame = +2
Query: 122 TVGETGQN-----LPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGK 286
+ G +G+N +PWVEKYRPK +D++ ++++ + + ++ LP+LLFYGPPGTGK
Sbjct: 25 SAGSSGENKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGK 84
Query: 287 TSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFA-----STRTIFKAGP-- 445
TSTILA A++++ P+ F VLELNASD+RGI +VR ++ +FA +R+ K P
Sbjct: 85 TSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPF 144
Query: 446 KLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPL 619
K++ILDEAD+MT+ AQ ALRR +EK ++ RFC+ICNY+ +II L SRC++FRF PL
Sbjct: 145 KIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPL 202
>AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C
(activator 1) 4 (37kD) protein.
Length = 363
Score = 180 bits (439), Expect = 3e-45
Identities = 88/178 (49%), Positives = 128/178 (71%), Gaps = 12/178 (6%)
Frame = +2
Query: 122 TVGETGQN-----LPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGK 286
+ G +G+N +PWVEKYRPK +D++ ++++ + + ++ LP+LLFYGPPGTGK
Sbjct: 25 SAGSSGENKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGK 84
Query: 287 TSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFA-----STRTIFKAGP-- 445
TSTILA A++++ P+ F VLELNASD+RGI +VR ++ +FA +R+ K P
Sbjct: 85 TSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPF 144
Query: 446 KLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPL 619
K++ILDEAD+MT+ AQ ALRR +EK ++ RFC+ICNY+ +II L SRC++FRF PL
Sbjct: 145 KIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPL 202
>M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-kDa
subunit protein.
Length = 354
Score = 159 bits (386), Expect = 8e-39
Identities = 80/172 (46%), Positives = 113/172 (65%), Gaps = 2/172 (1%)
Frame = +2
Query: 128 GETGQ-NLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILA 304
G G LPWVEKYRP +L+++V ++D + + F +E +P+++ GPPGTGKT++IL
Sbjct: 29 GSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILC 88
Query: 305 CAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTR-TIFKAGPKLIILDEADAMT 481
A+ + P +M LELNAS+DRGI +VR +I FA + T+ K K+IILDEAD+MT
Sbjct: 89 LARALLGPALKDAM-LELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMT 147
Query: 482 NDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIV 637
+ AQ ALRR +E Y++ RF + CN KII +QSRC R+ L QI+
Sbjct: 148 DGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQIL 199
>AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C
subunit 2 protein.
Length = 354
Score = 159 bits (386), Expect = 8e-39
Identities = 80/172 (46%), Positives = 113/172 (65%), Gaps = 2/172 (1%)
Frame = +2
Query: 128 GETGQ-NLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILA 304
G G LPWVEKYRP +L+++V ++D + + F +E +P+++ GPPGTGKT++IL
Sbjct: 29 GSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILC 88
Query: 305 CAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTR-TIFKAGPKLIILDEADAMT 481
A+ + P +M LELNAS+DRGI +VR +I FA + T+ K K+IILDEAD+MT
Sbjct: 89 LARALLGPALKDAM-LELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMT 147
Query: 482 NDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIV 637
+ AQ ALRR +E Y++ RF + CN KII +QSRC R+ L QI+
Sbjct: 148 DGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQIL 199
>AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein.
Length = 354
Score = 159 bits (386), Expect = 8e-39
Identities = 80/172 (46%), Positives = 113/172 (65%), Gaps = 2/172 (1%)
Frame = +2
Query: 128 GETGQ-NLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILA 304
G G LPWVEKYRP +L+++V ++D + + F +E +P+++ GPPGTGKT++IL
Sbjct: 29 GSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILC 88
Query: 305 CAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTR-TIFKAGPKLIILDEADAMT 481
A+ + P +M LELNAS+DRGI +VR +I FA + T+ K K+IILDEAD+MT
Sbjct: 89 LARALLGPALKDAM-LELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMT 147
Query: 482 NDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIV 637
+ AQ ALRR +E Y++ RF + CN KII +QSRC R+ L QI+
Sbjct: 148 DGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQIL 199
>BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 81.4 bits (192), Expect(2) = 9e-26
Identities = 37/83 (44%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +2
Query: 128 GETGQ-NLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILA 304
G G LPWVEKYRP +L+++V ++D + + F +E +P+++ GPPGTGKT++IL
Sbjct: 29 GSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILC 88
Query: 305 CAKQMYTPQQFSSMVLELNASDD 373
A+ + P +M LELNAS+D
Sbjct: 89 LARALLGPALKDAM-LELNASND 110
Score = 55.6 bits (128), Expect(2) = 9e-26
Identities = 26/56 (46%), Positives = 35/56 (62%)
Frame = +2
Query: 470 DAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIV 637
D+MT+ AQ ALRR +E Y++ RF + CN KII +QSRC R+ L QI+
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQIL 165
>BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 81.4 bits (192), Expect(2) = 9e-26
Identities = 37/83 (44%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +2
Query: 128 GETGQ-NLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILA 304
G G LPWVEKYRP +L+++V ++D + + F +E +P+++ GPPGTGKT++IL
Sbjct: 29 GSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILC 88
Query: 305 CAKQMYTPQQFSSMVLELNASDD 373
A+ + P +M LELNAS+D
Sbjct: 89 LARALLGPALKDAM-LELNASND 110
Score = 55.6 bits (128), Expect(2) = 9e-26
Identities = 26/56 (46%), Positives = 35/56 (62%)
Frame = +2
Query: 470 DAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIV 637
D+MT+ AQ ALRR +E Y++ RF + CN KII +QSRC R+ L QI+
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQIL 165
>AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C
(activator 1) 2 (40kD) protein.
Length = 320
Score = 81.4 bits (192), Expect(2) = 9e-26
Identities = 37/83 (44%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +2
Query: 128 GETGQ-NLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILA 304
G G LPWVEKYRP +L+++V ++D + + F +E +P+++ GPPGTGKT++IL
Sbjct: 29 GSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILC 88
Query: 305 CAKQMYTPQQFSSMVLELNASDD 373
A+ + P +M LELNAS+D
Sbjct: 89 LARALLGPALKDAM-LELNASND 110
Score = 55.6 bits (128), Expect(2) = 9e-26
Identities = 26/56 (46%), Positives = 35/56 (62%)
Frame = +2
Query: 470 DAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIV 637
D+MT+ AQ ALRR +E Y++ RF + CN KII +QSRC R+ L QI+
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQIL 165
>AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein.
Length = 320
Score = 81.4 bits (192), Expect(2) = 9e-26
Identities = 37/83 (44%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +2
Query: 128 GETGQ-NLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILA 304
G G LPWVEKYRP +L+++V ++D + + F +E +P+++ GPPGTGKT++IL
Sbjct: 29 GSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILC 88
Query: 305 CAKQMYTPQQFSSMVLELNASDD 373
A+ + P +M LELNAS+D
Sbjct: 89 LARALLGPALKDAM-LELNASND 110
Score = 55.6 bits (128), Expect(2) = 9e-26
Identities = 26/56 (46%), Positives = 35/56 (62%)
Frame = +2
Query: 470 DAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIV 637
D+MT+ AQ ALRR +E Y++ RF + CN KII +QSRC R+ L QI+
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQIL 165
>L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-kDa
subunit protein.
Length = 356
Score = 83.8 bits (198), Expect = 5e-16
Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 29/188 (15%)
Frame = +2
Query: 152 WVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMY--- 322
WV+KYRP L L H + + ++ PHLL YGP G GK + I+ +++Y
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63
Query: 323 ------------TPQQ--------FSSMVLELNASDDRGIG--IVRGQILSFASTR---T 427
TP + S+ LE+N SD +++ + + A ++ T
Sbjct: 64 VEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLET 123
Query: 428 IFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFR 607
+ K+++L E D +T DAQ+ALRR +EKY R + CN K+IP ++SRC R
Sbjct: 124 NSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVR 183
Query: 608 F-APLKQD 628
AP +D
Sbjct: 184 VPAPSIED 191
>BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 83.8 bits (198), Expect = 5e-16
Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 29/188 (15%)
Frame = +2
Query: 152 WVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMY--- 322
WV+KYRP L L H + + ++ PHLL YGP G GK + I+ +++Y
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63
Query: 323 ------------TPQQ--------FSSMVLELNASDDRGIG--IVRGQILSFASTR---T 427
TP + S+ LE+N SD +++ + + A ++ T
Sbjct: 64 VEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLET 123
Query: 428 IFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFR 607
+ K+++L E D +T DAQ+ALRR +EKY R + CN K+IP ++SRC R
Sbjct: 124 NSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVR 183
Query: 608 F-APLKQD 628
AP +D
Sbjct: 184 VPAPSIED 191
>BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 83.8 bits (198), Expect = 5e-16
Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 29/188 (15%)
Frame = +2
Query: 152 WVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMY--- 322
WV+KYRP L L H + + ++ PHLL YGP G GK + I+ +++Y
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63
Query: 323 ------------TPQQ--------FSSMVLELNASDDRGIG--IVRGQILSFASTR---T 427
TP + S+ LE+N SD +++ + + A ++ T
Sbjct: 64 VEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLET 123
Query: 428 IFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFR 607
+ K+++L E D +T DAQ+ALRR +EKY R + CN K+IP ++SRC R
Sbjct: 124 NSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVR 183
Query: 608 F-APLKQD 628
AP +D
Sbjct: 184 VPAPSIED 191
>AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 83.8 bits (198), Expect = 5e-16
Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 29/188 (15%)
Frame = +2
Query: 152 WVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMY--- 322
WV+KYRP L L H + + ++ PHLL YGP G GK + I+ +++Y
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63
Query: 323 ------------TPQQ--------FSSMVLELNASDDRGIG--IVRGQILSFASTR---T 427
TP + S+ LE+N SD +++ + + A ++ T
Sbjct: 64 VEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLET 123
Query: 428 IFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFR 607
+ K+++L E D +T DAQ+ALRR +EKY R + CN K+IP ++SRC R
Sbjct: 124 NSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVR 183
Query: 608 F-APLKQD 628
AP +D
Sbjct: 184 VPAPSIED 191
>AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C
(activator 1) 3 (38kD) protein.
Length = 356
Score = 83.8 bits (198), Expect = 5e-16
Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 29/188 (15%)
Frame = +2
Query: 152 WVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMY--- 322
WV+KYRP L L H + + ++ PHLL YGP G GK + I+ +++Y
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63
Query: 323 ------------TPQQ--------FSSMVLELNASDDRGIG--IVRGQILSFASTR---T 427
TP + S+ LE+N SD +++ + + A ++ T
Sbjct: 64 VEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLET 123
Query: 428 IFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFR 607
+ K+++L E D +T DAQ+ALRR +EKY R + CN K+IP ++SRC R
Sbjct: 124 NSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVR 183
Query: 608 F-APLKQD 628
AP +D
Sbjct: 184 VPAPSIED 191
>AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3
isoform 1 variant protein.
Length = 356
Score = 83.0 bits (196), Expect = 8e-16
Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 28/180 (15%)
Frame = +2
Query: 152 WVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMY--- 322
WV+KYRP L L H + + ++ PHLL YGP G GK + I+ +++Y
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63
Query: 323 ------------TPQQ--------FSSMVLELNASDDRGIG--IVRGQILSFASTR---T 427
TP + S+ LE+N SD +++ + + A ++ T
Sbjct: 64 VEKLRIEHQTTTTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLET 123
Query: 428 IFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFR 607
+ K+++L E D +T DAQ+ALRR +EKY R + CN K+IP ++SRC R
Sbjct: 124 NSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVR 183
>BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein
protein.
Length = 670
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTST 295
+N PWV+KY+P+ +L H I+ + ++K L LL GPPG GKT+T
Sbjct: 76 ENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTT 135
Query: 296 ILACAKQ 316
+ +K+
Sbjct: 136 LKILSKE 142
>BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTST 295
+N PWV+KY+P+ +L H I+ + ++K L LL GPPG GKT+T
Sbjct: 76 ENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTT 135
Query: 296 ILACAKQ 316
+ +K+
Sbjct: 136 LKILSKE 142
>AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTST 295
+N PWV+KY+P+ +L H I+ + ++K L LL GPPG GKT+T
Sbjct: 76 ENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTT 135
Query: 296 ILACAKQ 316
+ +K+
Sbjct: 136 LKILSKE 142
>AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein.
Length = 670
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTST 295
+N PWV+KY+P+ +L H I+ + ++K L LL GPPG GKT+T
Sbjct: 76 ENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTT 135
Query: 296 ILACAKQ 316
+ +K+
Sbjct: 136 LKILSKE 142
>AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTST 295
+N PWV+KY+P+ +L H I+ + ++K L LL GPPG GKT+T
Sbjct: 76 ENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTT 135
Query: 296 ILACAKQ 316
+ +K+
Sbjct: 136 LKILSKE 142
>AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTST 295
+N PWV+KY+P+ +L H I+ + ++K L LL GPPG GKT+T
Sbjct: 76 ENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTT 135
Query: 296 ILACAKQ 316
+ +K+
Sbjct: 136 LKILSKE 142
>AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTST 295
+N PWV+KY+P+ +L H I+ + ++K L LL GPPG GKT+T
Sbjct: 76 ENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTT 135
Query: 296 ILACAKQ 316
+ +K+
Sbjct: 136 LKILSKE 142
>AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein.
Length = 670
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTST 295
+N PWV+KY+P+ +L H I+ + ++K L LL GPPG GKT+T
Sbjct: 76 ENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTT 135
Query: 296 ILACAKQ 316
+ +K+
Sbjct: 136 LKILSKE 142
>AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolog
protein.
Length = 681
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTST 295
+N PWV+KY+P+ +L H I+ + ++K L LL GPPG GKT+T
Sbjct: 87 ENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTT 146
Query: 296 ILACAKQ 316
+ +K+
Sbjct: 147 LKILSKE 153
>AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein
protein.
Length = 670
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTST 295
+N PWV+KY+P+ +L H I+ + ++K L LL GPPG GKT+T
Sbjct: 76 ENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTT 135
Query: 296 ILACAKQ 316
+ +K+
Sbjct: 136 LKILSKE 142
>AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint
protein RAD17 protein.
Length = 670
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPH--------LLFYGPPGTGKTST 295
+N PWV+KY+P+ +L H I+ + ++K L LL GPPG GKT+T
Sbjct: 76 ENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTT 135
Query: 296 ILACAKQ 316
+ +K+
Sbjct: 136 LKILSKE 142
>BC018184-1|AAH18184.1| 975|Homo sapiens CTF18, chromosome
transmission fidelity factor 18 homolog (S. cerevisiae)
protein.
Length = 975
Score = 44.0 bits (99), Expect = 5e-04
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFK 436
L GPPG GKT+ A+ V+E+NASDDR + R +I + ++
Sbjct: 371 LLCGPPGLGKTTLAHVIARHA------GYSVVEMNASDDRSPEVFRTRIEAATQMESVLG 424
Query: 437 AG--PKLIILDEADAMTNDAQNALRRIIEK 520
AG P +++DE D A N L I+ +
Sbjct: 425 AGGKPNCLVIDEIDGAPVAAINVLLSILNR 454
>BC006437-1|AAH06437.1| 1016|Homo sapiens CHTF18 protein protein.
Length = 1016
Score = 44.0 bits (99), Expect = 5e-04
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFK 436
L GPPG GKT+ A+ V+E+NASDDR + R +I + ++
Sbjct: 412 LLCGPPGLGKTTLAHVIARHA------GYSVVEMNASDDRSPEVFRTRIEAATQMESVLG 465
Query: 437 AG--PKLIILDEADAMTNDAQNALRRIIEK 520
AG P +++DE D A N L I+ +
Sbjct: 466 AGGKPNCLVIDEIDGAPVAAINVLLSILNR 495
>BC006278-1|AAH06278.2| 975|Homo sapiens CTF18, chromosome
transmission fidelity factor 18 homolog (S. cerevisiae)
protein.
Length = 975
Score = 44.0 bits (99), Expect = 5e-04
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFK 436
L GPPG GKT+ A+ V+E+NASDDR + R +I + ++
Sbjct: 371 LLCGPPGLGKTTLAHVIARHA------GYSVVEMNASDDRSPEVFRTRIEAATQMESVLG 424
Query: 437 AG--PKLIILDEADAMTNDAQNALRRIIEK 520
AG P +++DE D A N L I+ +
Sbjct: 425 AGGKPNCLVIDEIDGAPVAAINVLLSILNR 454
>AL031033-2|CAB53056.1| 260|Homo sapiens protein ( Human DNA
sequence from clone LA16c-321D2 on chromosome 16
Contains a gene for a Ribosomal Large Subunit
Pseudouridine Synthase (EC ).
Length = 260
Score = 44.0 bits (99), Expect = 5e-04
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFK 436
L GPPG GKT+ A+ V+E+NASDDR + R +I + ++
Sbjct: 93 LLCGPPGLGKTTLAHVIARHA------GYSVVEMNASDDRSPEVFRTRIEAATQMESVLG 146
Query: 437 AG--PKLIILDEADAMTNDAQNALRRIIEK 520
AG P +++DE D A N L I+ +
Sbjct: 147 AGGKPNCLVIDEIDGAPVAAINVLLSILNR 176
>AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with
holliday junction DNA helicase RUVB like protein.
Length = 1184
Score = 44.0 bits (99), Expect = 5e-04
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFK 436
L GPPG GKT+ A+ V+E+NASDDR + R +I + ++
Sbjct: 566 LLCGPPGLGKTTLAHVIARHA------GYSVVEMNASDDRSPEVFRTRIEAATQMESVLG 619
Query: 437 AG--PKLIILDEADAMTNDAQNALRRIIEK 520
AG P +++DE D A N L I+ +
Sbjct: 620 AGGKPNCLVIDEIDGAPVAAINVLLSILNR 649
>AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 445
Score = 40.3 bits (90), Expect = 0.006
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 3/155 (1%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDII---KTINQFMKENQLPHLLFYGPPGTGKTSTILACA 310
Q P + RP L D + + ++ N++P L+ +GPPG GKT+ A
Sbjct: 3 QGKPLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIA 62
Query: 311 KQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDA 490
++ S + L+A++ + VR I + ++ FK ++ +DE
Sbjct: 63 S---NSKKHSIRFVTLSATNAK-TNDVRDVIKQAQNEKSFFKR-KTILFIDEIHRFNKSQ 117
Query: 491 QNALRRIIEKYTENVRFCIICNYLGKIIPALQSRC 595
Q+ +E T + N ++ AL SRC
Sbjct: 118 QDTFLPHVECGTITLIGATTENPSFQVNAALLSRC 152
>AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 665
Score = 40.3 bits (90), Expect = 0.006
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 3/155 (1%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDII---KTINQFMKENQLPHLLFYGPPGTGKTSTILACA 310
Q P + RP L D + + ++ N++P L+ +GPPG GKT+ A
Sbjct: 223 QGKPLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIA 282
Query: 311 KQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDA 490
++ S + L+A++ + VR I + ++ FK ++ +DE
Sbjct: 283 S---NSKKHSIRFVTLSATNAK-TNDVRDVIKQAQNEKSFFKR-KTILFIDEIHRFNKSQ 337
Query: 491 QNALRRIIEKYTENVRFCIICNYLGKIIPALQSRC 595
Q+ +E T + N ++ AL SRC
Sbjct: 338 QDTFLPHVECGTITLIGATTENPSFQVNAALLSRC 372
>AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 665
Score = 40.3 bits (90), Expect = 0.006
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 3/155 (1%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDII---KTINQFMKENQLPHLLFYGPPGTGKTSTILACA 310
Q P + RP L D + + ++ N++P L+ +GPPG GKT+ A
Sbjct: 223 QGKPLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIA 282
Query: 311 KQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDA 490
++ S + L+A++ + VR I + ++ FK ++ +DE
Sbjct: 283 S---NSKKHSIRFVTLSATNAK-TNDVRDVIKQAQNEKSFFKR-KTILFIDEIHRFNKSQ 337
Query: 491 QNALRRIIEKYTENVRFCIICNYLGKIIPALQSRC 595
Q+ +E T + N ++ AL SRC
Sbjct: 338 QDTFLPHVECGTITLIGATTENPSFQVNAALLSRC 372
>AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL
protein.
Length = 445
Score = 40.3 bits (90), Expect = 0.006
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 3/155 (1%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDII---KTINQFMKENQLPHLLFYGPPGTGKTSTILACA 310
Q P + RP L D + + ++ N++P L+ +GPPG GKT+ A
Sbjct: 3 QGKPLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIA 62
Query: 311 KQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDA 490
++ S + L+A++ + VR I + ++ FK ++ +DE
Sbjct: 63 S---NSKKHSIRFVTLSATNAK-TNDVRDVIKQAQNEKSFFKR-KTILFIDEIHRFNKSQ 117
Query: 491 QNALRRIIEKYTENVRFCIICNYLGKIIPALQSRC 595
Q+ +E T + N ++ AL SRC
Sbjct: 118 QDTFLPHVECGTITLIGATTENPSFQVNAALLSRC 152
>AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 646
Score = 40.3 bits (90), Expect = 0.006
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 3/155 (1%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDII---KTINQFMKENQLPHLLFYGPPGTGKTSTILACA 310
Q P + RP L D + + ++ N++P L+ +GPPG GKT+ A
Sbjct: 204 QGKPLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIA 263
Query: 311 KQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDA 490
++ S + L+A++ + VR I + ++ FK ++ +DE
Sbjct: 264 S---NSKKHSIRFVTLSATNAK-TNDVRDVIKQAQNEKSFFKR-KTILFIDEIHRFNKSQ 318
Query: 491 QNALRRIIEKYTENVRFCIICNYLGKIIPALQSRC 595
Q+ +E T + N ++ AL SRC
Sbjct: 319 QDTFLPHVECGTITLIGATTENPSFQVNAALLSRC 353
>AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase
interacting protein protein.
Length = 665
Score = 38.3 bits (85), Expect = 0.023
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 3/155 (1%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDII---KTINQFMKENQLPHLLFYGPPGTGKTSTILACA 310
Q P + RP L D + + ++ N++P L +GPPG GKT+ A
Sbjct: 223 QGKPLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLNLWGPPGCGKTTLAHIIA 282
Query: 311 KQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDA 490
++ S + L+A++ + VR I + ++ FK ++ +DE
Sbjct: 283 S---NSKKHSIRFVTLSATNAK-TNDVRDVIKQAQNEKSFFKR-KTILFIDEIHRFNKSQ 337
Query: 491 QNALRRIIEKYTENVRFCIICNYLGKIIPALQSRC 595
Q+ +E T + N ++ AL SRC
Sbjct: 338 QDTFLPHVECGTITLIGATTENPSFQVNAALLSRC 372
>BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 36.7 bits (81), Expect = 0.070
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDII---KTINQFMKENQLPHLLFYGPPGTGKTSTILACA 310
Q P + RP L D + + ++ N++P L+ +GPPG GKT+ A
Sbjct: 223 QGKPLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIA 282
Query: 311 KQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDA 490
++ S + L+A++ + VR I + ++ FK ++ +DE
Sbjct: 283 S---NSKKHSIRFVTLSATNAK-TNDVRDVIKQAQNEKSFFKR-KTILFIDEIHRFNKSQ 337
Query: 491 Q 493
Q
Sbjct: 338 Q 338
>AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 36.7 bits (81), Expect = 0.070
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDII---KTINQFMKENQLPHLLFYGPPGTGKTSTILACA 310
Q P + RP L D + + ++ N++P L+ +GPPG GKT+ A
Sbjct: 223 QGKPLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIA 282
Query: 311 KQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDA 490
++ S + L+A++ + VR I + ++ FK ++ +DE
Sbjct: 283 S---NSKKHSIRFVTLSATNAK-TNDVRDVIKQAQNEKSFFKR-KTILFIDEIHRFNKSQ 337
Query: 491 Q 493
Q
Sbjct: 338 Q 338
>L23320-1|AAA16121.1| 1148|Homo sapiens replication factor C large
subunit protein.
Length = 1148
Score = 35.9 bits (79), Expect = 0.12
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Frame = +2
Query: 257 LFYGPPGTGKTSTI-LACAKQMYTPQQFSSMVLELNASDDR---GIGIVRGQILSFASTR 424
L GPPG GKT+T L C Q+ +ELNASD R + + + L+ S +
Sbjct: 648 LLSGPPGVGKTTTASLVC-------QELGYSYVELNASDTRSKSSLKAIVAESLNNTSIK 700
Query: 425 TIFKAG-------PKLIILDEADAMT-NDAQNALRRIIE--KYTENVRFCIICNYLGKII 574
+ G +I+DE D M N+ + ++ +I K+T+ C+ + I
Sbjct: 701 GFYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKI 760
Query: 575 PALQSRCTRFRFAPLKQDQI 634
+L C RF + +QI
Sbjct: 761 RSLVHYCFDLRFQRPRVEQI 780
>BC051786-1|AAH51786.1| 1148|Homo sapiens RFC1 protein protein.
Length = 1148
Score = 35.9 bits (79), Expect = 0.12
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Frame = +2
Query: 257 LFYGPPGTGKTSTI-LACAKQMYTPQQFSSMVLELNASDDR---GIGIVRGQILSFASTR 424
L GPPG GKT+T L C Q+ +ELNASD R + + + L+ S +
Sbjct: 648 LLSGPPGVGKTTTASLVC-------QELGYSYVELNASDTRSKSSLKAIVAESLNNTSIK 700
Query: 425 TIFKAG-------PKLIILDEADAMT-NDAQNALRRIIE--KYTENVRFCIICNYLGKII 574
+ G +I+DE D M N+ + ++ +I K+T+ C+ + I
Sbjct: 701 GFYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKI 760
Query: 575 PALQSRCTRFRFAPLKQDQI 634
+L C RF + +QI
Sbjct: 761 RSLVHYCFDLRFQRPRVEQI 780
>BC051751-1|AAH51751.1| 1147|Homo sapiens replication factor C
(activator 1) 1, 145kDa protein.
Length = 1147
Score = 35.9 bits (79), Expect = 0.12
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Frame = +2
Query: 257 LFYGPPGTGKTSTI-LACAKQMYTPQQFSSMVLELNASDDR---GIGIVRGQILSFASTR 424
L GPPG GKT+T L C Q+ +ELNASD R + + + L+ S +
Sbjct: 647 LLSGPPGVGKTTTASLVC-------QELGYSYVELNASDTRSKSSLKAIVAESLNNTSIK 699
Query: 425 TIFKAG-------PKLIILDEADAMT-NDAQNALRRIIE--KYTENVRFCIICNYLGKII 574
+ G +I+DE D M N+ + ++ +I K+T+ C+ + I
Sbjct: 700 GFYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKI 759
Query: 575 PALQSRCTRFRFAPLKQDQI 634
+L C RF + +QI
Sbjct: 760 RSLVHYCFDLRFQRPRVEQI 779
>BC035297-1|AAH35297.1| 1148|Homo sapiens replication factor C
(activator 1) 1, 145kDa protein.
Length = 1148
Score = 35.9 bits (79), Expect = 0.12
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Frame = +2
Query: 257 LFYGPPGTGKTSTI-LACAKQMYTPQQFSSMVLELNASDDR---GIGIVRGQILSFASTR 424
L GPPG GKT+T L C Q+ +ELNASD R + + + L+ S +
Sbjct: 648 LLSGPPGVGKTTTASLVC-------QELGYSYVELNASDTRSKSSLKAIVAESLNNTSIK 700
Query: 425 TIFKAG-------PKLIILDEADAMT-NDAQNALRRIIE--KYTENVRFCIICNYLGKII 574
+ G +I+DE D M N+ + ++ +I K+T+ C+ + I
Sbjct: 701 GFYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKI 760
Query: 575 PALQSRCTRFRFAPLKQDQI 634
+L C RF + +QI
Sbjct: 761 RSLVHYCFDLRFQRPRVEQI 780
>AY600371-1|AAS94325.1| 1147|Homo sapiens replication factor C
(activator 1) 1, 145kDa protein.
Length = 1147
Score = 35.9 bits (79), Expect = 0.12
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Frame = +2
Query: 257 LFYGPPGTGKTSTI-LACAKQMYTPQQFSSMVLELNASDDR---GIGIVRGQILSFASTR 424
L GPPG GKT+T L C Q+ +ELNASD R + + + L+ S +
Sbjct: 647 LLSGPPGVGKTTTASLVC-------QELGYSYVELNASDTRSKSSLKAIVAESLNNTSIK 699
Query: 425 TIFKAG-------PKLIILDEADAMT-NDAQNALRRIIE--KYTENVRFCIICNYLGKII 574
+ G +I+DE D M N+ + ++ +I K+T+ C+ + I
Sbjct: 700 GFYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKI 759
Query: 575 PALQSRCTRFRFAPLKQDQI 634
+L C RF + +QI
Sbjct: 760 RSLVHYCFDLRFQRPRVEQI 779
>X76040-1|CAA53625.1| 937|Homo sapiens Lon protease-like protein
protein.
Length = 937
Score = 35.5 bits (78), Expect = 0.16
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Frame = +2
Query: 182 DDLVSHDDIIKTINQFMKENQLPH------LLFYGPPGTGKTSTILACAKQMYTPQ-QFS 340
+D +D+ K I +F+ +QL L FYGPPG GKTS + A+ + +FS
Sbjct: 467 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 526
Query: 341 ----SMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM----TNDAQN 496
+ V E+ +G + G+I+ K LI++DE D + D +
Sbjct: 527 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKT---KTENPLILIDEVDKIGRGYQGDPSS 583
Query: 497 ALRRIIEKYTENVRF 541
AL +++ +N F
Sbjct: 584 ALLELLDP-EQNANF 597
>X74215-1|CAA52291.1| 845|Homo sapiens Lon protease-like protein
protein.
Length = 845
Score = 35.5 bits (78), Expect = 0.16
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Frame = +2
Query: 182 DDLVSHDDIIKTINQFMKENQLPH------LLFYGPPGTGKTSTILACAKQMYTPQ-QFS 340
+D +D+ K I +F+ +QL L FYGPPG GKTS + A+ + +FS
Sbjct: 375 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 434
Query: 341 ----SMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM----TNDAQN 496
+ V E+ +G + G+I+ K LI++DE D + D +
Sbjct: 435 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKT---KTENPLILIDEVDKIGRGYQGDPSS 491
Query: 497 ALRRIIEKYTENVRF 541
AL +++ +N F
Sbjct: 492 ALLELLDP-EQNANF 505
>U02389-1|AAA61616.1| 962|Homo sapiens hLON ATP-dependent protease
protein.
Length = 962
Score = 35.5 bits (78), Expect = 0.16
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Frame = +2
Query: 182 DDLVSHDDIIKTINQFMKENQLPH------LLFYGPPGTGKTSTILACAKQMYTPQ-QFS 340
+D +D+ K I +F+ +QL L FYGPPG GKTS + A+ + +FS
Sbjct: 492 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 551
Query: 341 ----SMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM----TNDAQN 496
+ V E+ +G + G+I+ K LI++DE D + D +
Sbjct: 552 VGGMTDVTEIKGHRRTYVGAMPGKIIQCLKKT---KTENPLILIDEVDKIGRGYQGDPSS 608
Query: 497 ALRRIIEKYTENVRF 541
AL +++ +N F
Sbjct: 609 ALLELLDP-EQNANF 622
>M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human
immunodeficiency virus tat transactivator binding
protein-1 (tbp-1) mRNA, complete cds. ).
Length = 404
Score = 35.5 bits (78), Expect = 0.16
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRT 427
+L YGPPGTGKT ACA Q + ++++ D G +VR +FA +
Sbjct: 188 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLVRD---AFALAK- 241
Query: 428 IFKAGPKLIILDEADAM 478
+ P +I +DE DA+
Sbjct: 242 --EKAPSIIFIDELDAI 256
>CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein.
Length = 404
Score = 35.5 bits (78), Expect = 0.16
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRT 427
+L YGPPGTGKT ACA Q + ++++ D G +VR +FA +
Sbjct: 188 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLVRD---AFALAK- 241
Query: 428 IFKAGPKLIILDEADAM 478
+ P +I +DE DA+
Sbjct: 242 --EKAPSIIFIDELDAI 256
>BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein.
Length = 491
Score = 35.5 bits (78), Expect = 0.16
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRT 427
+L YGPPGTGKT ACA Q + ++++ D G +VR +FA +
Sbjct: 275 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLVRD---AFALAK- 328
Query: 428 IFKAGPKLIILDEADAM 478
+ P +I +DE DA+
Sbjct: 329 --EKAPSIIFIDELDAI 343
>BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 35.5 bits (78), Expect = 0.16
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRT 427
+L YGPPGTGKT ACA Q + ++++ D G +VR +FA +
Sbjct: 223 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLVRD---AFALAK- 276
Query: 428 IFKAGPKLIILDEADAM 478
+ P +I +DE DA+
Sbjct: 277 --EKAPSIIFIDELDAI 291
>BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 35.5 bits (78), Expect = 0.16
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRT 427
+L YGPPGTGKT ACA Q + ++++ D G +VR +FA +
Sbjct: 223 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLVRD---AFALAK- 276
Query: 428 IFKAGPKLIILDEADAM 478
+ P +I +DE DA+
Sbjct: 277 --EKAPSIIFIDELDAI 291
>BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 35.5 bits (78), Expect = 0.16
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRT 427
+L YGPPGTGKT ACA Q + ++++ D G +VR +FA +
Sbjct: 223 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLVRD---AFALAK- 276
Query: 428 IFKAGPKLIILDEADAM 478
+ P +I +DE DA+
Sbjct: 277 --EKAPSIIFIDELDAI 291
>BC004934-1|AAH04934.1| 517|Homo sapiens Unknown (protein for
IMAGE:3606377) protein.
Length = 517
Score = 35.5 bits (78), Expect = 0.16
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Frame = +2
Query: 182 DDLVSHDDIIKTINQFMKENQLPH------LLFYGPPGTGKTSTILACAKQMYTPQ-QFS 340
+D +D+ K I +F+ +QL L FYGPPG GKTS + A+ + +FS
Sbjct: 47 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 106
Query: 341 ----SMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM----TNDAQN 496
+ V E+ +G + G+I+ K LI++DE D + D +
Sbjct: 107 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKT---KTENPLILIDEVDKIGRGYQGDPSS 163
Query: 497 ALRRIIEKYTENVRF 541
AL +++ +N F
Sbjct: 164 ALLELLDP-EQNANF 177
>BC000235-1|AAH00235.1| 959|Homo sapiens lon peptidase 1,
mitochondrial protein.
Length = 959
Score = 35.5 bits (78), Expect = 0.16
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Frame = +2
Query: 182 DDLVSHDDIIKTINQFMKENQLPH------LLFYGPPGTGKTSTILACAKQMYTPQ-QFS 340
+D +D+ K I +F+ +QL L FYGPPG GKTS + A+ + +FS
Sbjct: 489 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 548
Query: 341 ----SMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM----TNDAQN 496
+ V E+ +G + G+I+ K LI++DE D + D +
Sbjct: 549 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKT---KTENPLILIDEVDKIGRGYQGDPSS 605
Query: 497 ALRRIIEKYTENVRF 541
AL +++ +N F
Sbjct: 606 ALLELLDP-EQNANF 619
>AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase
subunit 3 variant protein.
Length = 424
Score = 35.5 bits (78), Expect = 0.16
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRT 427
+L YGPPGTGKT ACA Q + ++++ D G +VR +FA +
Sbjct: 208 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLVRD---AFALAK- 261
Query: 428 IFKAGPKLIILDEADAM 478
+ P +I +DE DA+
Sbjct: 262 --EKAPSIIFIDELDAI 276
>AK096626-1|BAC04829.1| 895|Homo sapiens protein ( Homo sapiens
cDNA FLJ39307 fis, clone OCBBF2013208, highly similar to
MITOCHONDRIAL LON PROTEASE PRECURSOR (EC 3.4.21.-). ).
Length = 895
Score = 35.5 bits (78), Expect = 0.16
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Frame = +2
Query: 182 DDLVSHDDIIKTINQFMKENQLPH------LLFYGPPGTGKTSTILACAKQMYTPQ-QFS 340
+D +D+ K I +F+ +QL L FYGPPG GKTS + A+ + +FS
Sbjct: 425 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 484
Query: 341 ----SMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM----TNDAQN 496
+ V E+ +G + G+I+ K LI++DE D + D +
Sbjct: 485 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKT---KTENPLILIDEVDKIGRGYQGDPSS 541
Query: 497 ALRRIIEKYTENVRF 541
AL +++ +N F
Sbjct: 542 ALLELLDP-EQNANF 555
>AF059309-1|AAD24414.1| 959|Homo sapiens LON protease protein.
Length = 959
Score = 35.5 bits (78), Expect = 0.16
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Frame = +2
Query: 182 DDLVSHDDIIKTINQFMKENQLPH------LLFYGPPGTGKTSTILACAKQMYTPQ-QFS 340
+D +D+ K I +F+ +QL L FYGPPG GKTS + A+ + +FS
Sbjct: 489 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 548
Query: 341 ----SMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM----TNDAQN 496
+ V E+ +G + G+I+ K LI++DE D + D +
Sbjct: 549 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKT---KTENPLILIDEVDKIGRGYQGDPSS 605
Query: 497 ALRRIIEKYTENVRF 541
AL +++ +N F
Sbjct: 606 ALLELLDP-EQNANF 619
>BC109218-1|AAI09219.1| 848|Homo sapiens LONP1 protein protein.
Length = 848
Score = 35.1 bits (77), Expect = 0.21
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Frame = +2
Query: 182 DDLVSHDDIIKTINQFMKENQLPH------LLFYGPPGTGKTSTILACAKQMYTPQ-QFS 340
+D +D+ K I +F+ +QL L FYGPPG GKTS + A+ + +FS
Sbjct: 378 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 437
Query: 341 ----SMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEAD 472
+ V E+ +G + G+I+ K LI++DE D
Sbjct: 438 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKT---KTENPLILIDEVD 482
>CR456466-1|CAG30352.1| 1211|Homo sapiens dJ402G11.8 protein.
Length = 1211
Score = 34.3 bits (75), Expect = 0.37
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +2
Query: 245 LPHLLFYGPPGTGKTSTILACAKQMY 322
LP++LF GPPGTGKT TI+ Q++
Sbjct: 764 LPYILF-GPPGTGKTVTIIEAVLQVH 788
>BC150137-1|AAI50138.1| 1165|Homo sapiens MOV10L1 protein protein.
Length = 1165
Score = 34.3 bits (75), Expect = 0.37
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +2
Query: 245 LPHLLFYGPPGTGKTSTILACAKQMY 322
LP++LF GPPGTGKT TI+ Q++
Sbjct: 764 LPYILF-GPPGTGKTVTIIEAVLQVH 788
>BC110434-1|AAI10435.1| 598|Homo sapiens LONP2 protein protein.
Length = 598
Score = 34.3 bits (75), Expect = 0.37
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Frame = +2
Query: 218 INQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVL--ELNASDDRG---- 379
+ Q + P L F GPPG GKTS + AK + ++F + L + SD RG
Sbjct: 105 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL--GREFHRIALGGVCDQSDIRGHRRT 162
Query: 380 -IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQ 493
+G + G+I++ +T+ P + +LDE D + Q
Sbjct: 163 YVGSMPGRIIN--GLKTVGVNNP-VFLLDEVDKLGKSLQ 198
>BC093912-1|AAH93912.1| 852|Homo sapiens lon peptidase 2,
peroxisomal protein.
Length = 852
Score = 34.3 bits (75), Expect = 0.37
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Frame = +2
Query: 218 INQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVL--ELNASDDRG---- 379
+ Q + P L F GPPG GKTS + AK + ++F + L + SD RG
Sbjct: 359 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL--GREFHRIALGGVCDQSDIRGHRRT 416
Query: 380 -IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQ 493
+G + G+I++ +T+ P + +LDE D + Q
Sbjct: 417 YVGSMPGRIIN--GLKTVGVNNP-VFLLDEVDKLGKSLQ 452
>BC093910-1|AAH93910.1| 852|Homo sapiens lon peptidase 2,
peroxisomal protein.
Length = 852
Score = 34.3 bits (75), Expect = 0.37
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Frame = +2
Query: 218 INQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVL--ELNASDDRG---- 379
+ Q + P L F GPPG GKTS + AK + ++F + L + SD RG
Sbjct: 359 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL--GREFHRIALGGVCDQSDIRGHRRT 416
Query: 380 -IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQ 493
+G + G+I++ +T+ P + +LDE D + Q
Sbjct: 417 YVGSMPGRIIN--GLKTVGVNNP-VFLLDEVDKLGKSLQ 452
>BC043423-1|AAH43423.1| 301|Homo sapiens ABCB6 protein protein.
Length = 301
Score = 34.3 bits (75), Expect = 0.37
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 371 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 547
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 181 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 239
Query: 548 ICNYLGKIIPALQ 586
+ + L ++ A Q
Sbjct: 240 VAHRLSTVVNADQ 252
>BC000559-1|AAH00559.1| 842|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 6 protein.
Length = 842
Score = 34.3 bits (75), Expect = 0.37
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 371 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 547
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 722 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 780
Query: 548 ICNYLGKIIPALQ 586
+ + L ++ A Q
Sbjct: 781 VAHRLSTVVNADQ 793
>AL834201-1|CAD38889.1| 715|Homo sapiens hypothetical protein
protein.
Length = 715
Score = 34.3 bits (75), Expect = 0.37
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Frame = +2
Query: 218 INQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVL--ELNASDDRG---- 379
+ Q + P L F GPPG GKTS + AK + ++F + L + SD RG
Sbjct: 222 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL--GREFHRIALGGVCDQSDIRGHRRT 279
Query: 380 -IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQ 493
+G + G+I++ +T+ P + +LDE D + Q
Sbjct: 280 YVGSMPGRIIN--GLKTVGVNNP-VFLLDEVDKLGKSLQ 315
>AL034546-1|CAI23226.1| 1211|Homo sapiens protein ( Human DNA
sequence from clone RP5-898I4 on chromosome 22q13.33. ).
Length = 1211
Score = 34.3 bits (75), Expect = 0.37
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +2
Query: 245 LPHLLFYGPPGTGKTSTILACAKQMY 322
LP++LF GPPGTGKT TI+ Q++
Sbjct: 764 LPYILF-GPPGTGKTVTIIEAVLQVH 788
>AL022328-2|CAB63041.1| 417|Homo sapiens protein ( Human DNA
sequence from clone RP3-402G11 on chromosome
22q13.31-13.33. ).
Length = 417
Score = 34.3 bits (75), Expect = 0.37
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +2
Query: 245 LPHLLFYGPPGTGKTSTILACAKQMY 322
LP++LF GPPGTGKT TI+ Q++
Sbjct: 20 LPYILF-GPPGTGKTVTIIEAVLQVH 44
>AL022328-1|CAI42752.1| 1211|Homo sapiens protein ( Human DNA
sequence from clone RP3-402G11 on chromosome
22q13.31-13.33. ).
Length = 1211
Score = 34.3 bits (75), Expect = 0.37
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +2
Query: 245 LPHLLFYGPPGTGKTSTILACAKQMY 322
LP++LF GPPGTGKT TI+ Q++
Sbjct: 764 LPYILF-GPPGTGKTVTIIEAVLQVH 788
>AK172812-1|BAD18782.1| 571|Homo sapiens protein ( Homo sapiens
cDNA FLJ23973 fis, clone HEP18305, highly similar to
ATP-binding cassette, sub-family B, member 6,
mitochondrial precursor. ).
Length = 571
Score = 34.3 bits (75), Expect = 0.37
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 371 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 547
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 451 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 509
Query: 548 ICNYLGKIIPALQ 586
+ + L ++ A Q
Sbjct: 510 VAHRLSTVVNADQ 522
>AK074775-1|BAC11201.1| 852|Homo sapiens protein ( Homo sapiens
cDNA FLJ90294 fis, clone NT2RP2000178, weakly similar to
MITOCHONDRIAL LON PROTEASE HOMOLOG 1 PRECURSOR (EC
3.4.21.-). ).
Length = 852
Score = 34.3 bits (75), Expect = 0.37
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Frame = +2
Query: 218 INQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVL--ELNASDDRG---- 379
+ Q + P L F GPPG GKTS + AK + ++F + L + SD RG
Sbjct: 359 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL--GREFHRIALGGVCDQSDIRGHRRT 416
Query: 380 -IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQ 493
+G + G+I++ +T+ P + +LDE D + Q
Sbjct: 417 YVGSMPGRIIN--GLKTVGVNNP-VFLLDEVDKLGKSLQ 452
>AK057026-1|BAB71347.1| 766|Homo sapiens protein ( Homo sapiens
cDNA FLJ32464 fis, clone SKNMC1000251, highly similar to
Homo sapiens MT-ABC transporter (MTABC) mRNA. ).
Length = 766
Score = 34.3 bits (75), Expect = 0.37
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 371 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 547
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 646 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 704
Query: 548 ICNYLGKIIPALQ 586
+ + L ++ A Q
Sbjct: 705 VAHRLSTVVNADQ 717
>AK027666-1|BAB55278.1| 581|Homo sapiens protein ( Homo sapiens
cDNA FLJ14760 fis, clone NT2RP3003301, moderately
similar to MITOCHONDRIAL LON PROTEASE HOMOLOG 1
PRECURSOR (EC 3.4.21.-). ).
Length = 581
Score = 34.3 bits (75), Expect = 0.37
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Frame = +2
Query: 218 INQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVL--ELNASDDRG---- 379
+ Q + P L F GPPG GKTS + AK + ++F + L + SD RG
Sbjct: 88 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL--GREFHRIALGGVCDQSDIRGHRRT 145
Query: 380 -IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQ 493
+G + G+I++ +T+ P + +LDE D + Q
Sbjct: 146 YVGSMPGRIIN--GLKTVGVNNP-VFLLDEVDKLGKSLQ 181
>AJ548761-1|CAD68987.1| 852|Homo sapiens peroxisomal lon protease
protein.
Length = 852
Score = 34.3 bits (75), Expect = 0.37
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Frame = +2
Query: 218 INQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVL--ELNASDDRG---- 379
+ Q + P L F GPPG GKTS + AK + ++F + L + SD RG
Sbjct: 359 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL--GREFHRIALGGVCDQSDIRGHRRT 416
Query: 380 -IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQ 493
+G + G+I++ +T+ P + +LDE D + Q
Sbjct: 417 YVGSMPGRIIN--GLKTVGVNNP-VFLLDEVDKLGKSLQ 452
>AJ289233-1|CAB95766.2| 842|Homo sapiens ABC transporter umat
protein.
Length = 842
Score = 34.3 bits (75), Expect = 0.37
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 371 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 547
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 722 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 780
Query: 548 ICNYLGKIIPALQ 586
+ + L ++ A Q
Sbjct: 781 VAHRLSTVVNADQ 793
>AF308472-1|AAG33617.1| 896|Homo sapiens ATP-binding cassette
half-transporter protein.
Length = 896
Score = 34.3 bits (75), Expect = 0.37
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 371 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 547
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 776 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 834
Query: 548 ICNYLGKIIPALQ 586
+ + L ++ A Q
Sbjct: 835 VAHRLSTVVNADQ 847
>AF285604-1|AAK31983.1| 1211|Homo sapiens MOV10-like 1 protein.
Length = 1211
Score = 34.3 bits (75), Expect = 0.37
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +2
Query: 245 LPHLLFYGPPGTGKTSTILACAKQMY 322
LP++LF GPPGTGKT TI+ Q++
Sbjct: 764 LPYILF-GPPGTGKTVTIIEAVLQVH 788
>AF076775-1|AAF75107.1| 842|Homo sapiens MT-ABC transporter
protein.
Length = 842
Score = 34.3 bits (75), Expect = 0.37
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 371 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 547
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 722 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 780
Query: 548 ICNYLGKIIPALQ 586
+ + L ++ A Q
Sbjct: 781 VAHRLSTVVNADQ 793
>AF070598-1|AAC28653.1| 511|Homo sapiens ABC transporter protein.
Length = 511
Score = 34.3 bits (75), Expect = 0.37
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 371 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 547
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 391 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 449
Query: 548 ICNYLGKIIPALQ 586
+ + L ++ A Q
Sbjct: 450 VAHRLSTVVNADQ 462
>AB039371-1|BAA96733.1| 842|Homo sapiens mitochondrial ABC
transporter 3 protein.
Length = 842
Score = 34.3 bits (75), Expect = 0.37
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 371 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 547
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 722 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 780
Query: 548 ICNYLGKIIPALQ 586
+ + L ++ A Q
Sbjct: 781 VAHRLSTVVNADQ 793
>Z22642-1|CAA80355.1| 1147|Homo sapiens PO-GA protein.
Length = 1147
Score = 33.9 bits (74), Expect = 0.49
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Frame = +2
Query: 257 LFYGPPGTGKTSTI-LACAKQMYTPQQFSSMVLELNASDDR---GIGIVRGQILSFASTR 424
L GPPG GKT+T L C Q+ +ELN SD R + + + L+ S +
Sbjct: 647 LLSGPPGVGKTTTASLVC-------QELGYSYVELNRSDTRSKSSLKAIVAESLNNTSIK 699
Query: 425 TIFKAG-------PKLIILDEADAMT-NDAQNALRRIIE--KYTENVRFCIICNYLGKII 574
+ G +I+DE D M N+ + ++ +I K+T+ C+ + I
Sbjct: 700 GFYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKI 759
Query: 575 PALQSRCTRFRFAPLKQDQI 634
+L C RF + +QI
Sbjct: 760 RSLVHYCFDLRFQRPRVEQI 779
>AF040250-1|AAB99788.1| 1147|Homo sapiens DNA binding protein protein.
Length = 1147
Score = 33.9 bits (74), Expect = 0.49
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Frame = +2
Query: 257 LFYGPPGTGKTSTI-LACAKQMYTPQQFSSMVLELNASDDR---GIGIVRGQILSFASTR 424
L GPPG GKT+T L C Q+ +ELN SD R + + + L+ S +
Sbjct: 647 LLSGPPGVGKTTTASLVC-------QELGYSYVELNRSDTRSKSSLKAIVAESLNNTSIK 699
Query: 425 TIFKAG-------PKLIILDEADAMT-NDAQNALRRIIE--KYTENVRFCIICNYLGKII 574
+ G +I+DE D M N+ + ++ +I K+T+ C+ + I
Sbjct: 700 GFYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKI 759
Query: 575 PALQSRCTRFRFAPLKQDQI 634
+L C RF + +QI
Sbjct: 760 RSLVHYCFDLRFQRPRVEQI 779
>BC094881-1|AAH94881.1| 1163|Homo sapiens HELZ protein protein.
Length = 1163
Score = 33.5 bits (73), Expect = 0.65
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 242 QLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVL 352
QLP +L GP GTGKT T+ K + Q+ S +++
Sbjct: 660 QLPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILI 696
>BC047879-1|AAH47879.1| 577|Homo sapiens SHQ1 homolog (S.
cerevisiae) protein.
Length = 577
Score = 33.5 bits (73), Expect = 0.65
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 EFYSFLKLVNQSTI*INRFY*SICTYILEAI*KYCYKNNMTVGETGQNLPW-VEKYRP 172
E Y K VN+S + R +C +++ + YCY+ +T GE W + K P
Sbjct: 249 EKYQLRKFVNKSYLLDKRACRQVCYSLIDILLAYCYETRVTEGEKNVESAWNIRKLSP 306
>BC039830-1|AAH39830.1| 577|Homo sapiens SHQ1 homolog (S.
cerevisiae) protein.
Length = 577
Score = 33.5 bits (73), Expect = 0.65
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 EFYSFLKLVNQSTI*INRFY*SICTYILEAI*KYCYKNNMTVGETGQNLPW-VEKYRP 172
E Y K VN+S + R +C +++ + YCY+ +T GE W + K P
Sbjct: 249 EKYQLRKFVNKSYLLDKRACRQVCYSLIDILLAYCYETRVTEGEKNVESAWNIRKLSP 306
>BC032671-1|AAH32671.1| 577|Homo sapiens SHQ1 homolog (S.
cerevisiae) protein.
Length = 577
Score = 33.5 bits (73), Expect = 0.65
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 EFYSFLKLVNQSTI*INRFY*SICTYILEAI*KYCYKNNMTVGETGQNLPW-VEKYRP 172
E Y K VN+S + R +C +++ + YCY+ +T GE W + K P
Sbjct: 249 EKYQLRKFVNKSYLLDKRACRQVCYSLIDILLAYCYETRVTEGEKNVESAWNIRKLSP 306
>BC025270-1|AAH25270.1| 577|Homo sapiens SHQ1 homolog (S.
cerevisiae) protein.
Length = 577
Score = 33.5 bits (73), Expect = 0.65
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 EFYSFLKLVNQSTI*INRFY*SICTYILEAI*KYCYKNNMTVGETGQNLPW-VEKYRP 172
E Y K VN+S + R +C +++ + YCY+ +T GE W + K P
Sbjct: 249 EKYQLRKFVNKSYLLDKRACRQVCYSLIDILLAYCYETRVTEGEKNVESAWNIRKLSP 306
>BC017274-1|AAH17274.1| 577|Homo sapiens SHQ1 homolog (S.
cerevisiae) protein.
Length = 577
Score = 33.5 bits (73), Expect = 0.65
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 EFYSFLKLVNQSTI*INRFY*SICTYILEAI*KYCYKNNMTVGETGQNLPW-VEKYRP 172
E Y K VN+S + R +C +++ + YCY+ +T GE W + K P
Sbjct: 249 EKYQLRKFVNKSYLLDKRACRQVCYSLIDILLAYCYETRVTEGEKNVESAWNIRKLSP 306
>BC017204-1|AAH17204.1| 577|Homo sapiens SHQ1 homolog (S.
cerevisiae) protein.
Length = 577
Score = 33.5 bits (73), Expect = 0.65
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 EFYSFLKLVNQSTI*INRFY*SICTYILEAI*KYCYKNNMTVGETGQNLPW-VEKYRP 172
E Y K VN+S + R +C +++ + YCY+ +T GE W + K P
Sbjct: 249 EKYQLRKFVNKSYLLDKRACRQVCYSLIDILLAYCYETRVTEGEKNVESAWNIRKLSP 306
>BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associated
5-like 1 protein.
Length = 753
Score = 33.5 bits (73), Expect = 0.65
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTP-QQFSSMVLELNASDDRGIGIVRGQILSFASTRTI 430
+L GPPG GKT + A A++ S+ L+ + + + R F R +
Sbjct: 237 VLLAGPPGVGKTQLVQAVAREAGAELLAVSAPALQGSRPGETEENVRR----VFQRAREL 292
Query: 431 FKAGPKLIILDEADAM 478
GP L+ LDE DA+
Sbjct: 293 ASRGPSLLFLDEMDAL 308
>AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility
associated gene 1 protein.
Length = 1844
Score = 33.5 bits (73), Expect = 0.65
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L GP G GKT+ + ACA Q+ + E+NAS R + Q+ + +
Sbjct: 1128 VLITGPTGVGKTAAVYACA------QELGFKIFEVNASSQRSGRQILSQLKEATQSHQVD 1181
Query: 434 KAG 442
K G
Sbjct: 1182 KQG 1184
Score = 30.3 bits (65), Expect = 6.1
Identities = 9/33 (27%), Positives = 23/33 (69%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKE 238
+++ W EKY+P+ +L+ ++ IK ++ ++K+
Sbjct: 1050 EDMLWTEKYQPQTASELIGNELAIKKLHSWLKD 1082
>AK024656-1|BAB14947.1| 352|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21003 fis, clone CAE03685. ).
Length = 352
Score = 33.5 bits (73), Expect = 0.65
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 EFYSFLKLVNQSTI*INRFY*SICTYILEAI*KYCYKNNMTVGETGQNLPW-VEKYRP 172
E Y K VN+S + R +C +++ + YCY+ +T GE W + K P
Sbjct: 24 EKYQLRKFVNKSYLLDKRACRQVCYSLIDILLAYCYETRVTEGEKNVESAWNIRKLSP 81
>AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens
cDNA FLJ13170 fis, clone NT2RP3003809, weakly similar to
SAV PROTEIN. ).
Length = 620
Score = 33.5 bits (73), Expect = 0.65
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTP-QQFSSMVLELNASDDRGIGIVRGQILSFASTRTI 430
+L GPPG GKT + A A++ S+ L+ + + + R F R +
Sbjct: 237 VLLAGPPGVGKTQLVQAVAREAGAELLAVSAPALQGSRPGETEENVRR----VFQRAREL 292
Query: 431 FKAGPKLIILDEADAM 478
GP L+ LDE DA+
Sbjct: 293 ASRGPSLLFLDEMDAL 308
>AK022797-1|BAB14248.1| 801|Homo sapiens protein ( Homo sapiens
cDNA FLJ12735 fis, clone NT2RP2000258, weakly similar to
ACTIVATOR 1 140 KD SUBUNIT. ).
Length = 801
Score = 33.5 bits (73), Expect = 0.65
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L GP G GKT+ + ACA Q+ + E+NAS R + Q+ + +
Sbjct: 725 VLITGPTGVGKTAAVYACA------QELGFKIFEVNASSQRSGRQILSQLKEATQSHQVD 778
Query: 434 KAG 442
K G
Sbjct: 779 KQG 781
Score = 30.3 bits (65), Expect = 6.1
Identities = 9/33 (27%), Positives = 23/33 (69%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKE 238
+++ W EKY+P+ +L+ ++ IK ++ ++K+
Sbjct: 647 EDMLWTEKYQPQTASELIGNELAIKKLHSWLKD 679
>AK001401-1|BAA91669.1| 519|Homo sapiens protein ( Homo sapiens
cDNA FLJ10539 fis, clone NT2RP2001218. ).
Length = 519
Score = 33.5 bits (73), Expect = 0.65
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 EFYSFLKLVNQSTI*INRFY*SICTYILEAI*KYCYKNNMTVGETGQNLPW-VEKYRP 172
E Y K VN+S + R +C +++ + YCY+ +T GE W + K P
Sbjct: 191 EKYQLRKFVNKSYLLDKRACRQVCYSLIDILLAYCYETRVTEGEKNVESAWNIRKLSP 248
>AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 1844
Score = 33.5 bits (73), Expect = 0.65
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L GP G GKT+ + ACA Q+ + E+NAS R + Q+ + +
Sbjct: 1128 VLITGPTGVGKTAAVYACA------QELGFKIFEVNASSQRSGRQILSQLKEATQSHQVD 1181
Query: 434 KAG 442
K G
Sbjct: 1182 KQG 1184
Score = 30.3 bits (65), Expect = 6.1
Identities = 9/33 (27%), Positives = 23/33 (69%)
Frame = +2
Query: 140 QNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKE 238
+++ W EKY+P+ +L+ ++ IK ++ ++K+
Sbjct: 1050 EDMLWTEKYQPQTASELIGNELAIKKLHSWLKD 1082
>Y18418-1|CAB46271.1| 456|Homo sapiens erythrocyte cytosolic
protein of 54 kDa, ECP-54 protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.86
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 349
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>DQ469310-1|ABF13334.1| 386|Homo sapiens RUVBL1-FK protein.
Length = 386
Score = 33.1 bits (72), Expect = 0.86
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 349
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>BT007057-1|AAP35706.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.86
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 349
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>BC073998-1|AAH73998.1| 287|Homo sapiens ATAD1 protein protein.
Length = 287
Score = 33.1 bits (72), Expect = 0.86
Identities = 25/82 (30%), Positives = 39/82 (47%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L YGPPG GKT A AK+ +F + L+ + D+ G Q L+ A
Sbjct: 129 VLLYGPPGCGKTLIAKATAKE--AGCRFIN--LQPSTLTDKWYG--ESQKLAAAVFSLAI 182
Query: 434 KAGPKLIILDEADAMTNDAQNA 499
K P +I +DE D+ + ++
Sbjct: 183 KLQPSIIFIDEIDSFLRNRSSS 204
>BC063530-1|AAH63530.1| 330|Homo sapiens ATAD1 protein protein.
Length = 330
Score = 33.1 bits (72), Expect = 0.86
Identities = 25/82 (30%), Positives = 39/82 (47%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L YGPPG GKT A AK+ +F + L+ + D+ G Q L+ A
Sbjct: 98 VLLYGPPGCGKTLIAKATAKE--AGCRFIN--LQPSTLTDKWYG--ESQKLAAAVFSLAI 151
Query: 434 KAGPKLIILDEADAMTNDAQNA 499
K P +I +DE D+ + ++
Sbjct: 152 KLQPSIIFIDEIDSFLRNRSSS 173
>BC012886-1|AAH12886.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.86
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 349
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>BC002993-1|AAH02993.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.86
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 349
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>AL391244-1|CAI22656.1| 473|Homo sapiens ATPase family, AAA domain
containing 3C protein.
Length = 473
Score = 33.1 bits (72), Expect = 0.86
Identities = 33/113 (29%), Positives = 51/113 (45%)
Frame = +2
Query: 200 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 379
D I T N H+L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 155 DIAIMTRNIKKNRGLYRHILLYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 212
Query: 380 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 538
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 213 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 255
>AL157945-1|CAI22067.1| 473|Homo sapiens ATPase family, AAA domain
containing 3C protein.
Length = 473
Score = 33.1 bits (72), Expect = 0.86
Identities = 33/113 (29%), Positives = 51/113 (45%)
Frame = +2
Query: 200 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 379
D I T N H+L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 155 DIAIMTRNIKKNRGLYRHILLYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 212
Query: 380 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 538
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 213 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 255
>AL133327-1|CAI16701.1| 361|Homo sapiens ATPase family, AAA domain
containing 1 protein.
Length = 361
Score = 33.1 bits (72), Expect = 0.86
Identities = 25/82 (30%), Positives = 39/82 (47%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L YGPPG GKT A AK+ +F + L+ + D+ G Q L+ A
Sbjct: 129 VLLYGPPGCGKTLIAKATAKE--AGCRFIN--LQPSTLTDKWYG--ESQKLAAAVFSLAI 182
Query: 434 KAGPKLIILDEADAMTNDAQNA 499
K P +I +DE D+ + ++
Sbjct: 183 KLQPSIIFIDEIDSFLRNRSSS 204
>AK222575-1|BAD96295.1| 456|Homo sapiens TATA binding protein
interacting protein 49 kDa variant protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.86
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 349
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>AK222563-1|BAD96283.1| 456|Homo sapiens TATA binding protein
interacting protein 49 kDa variant protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.86
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 349
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>AK075223-1|BAC11482.1| 361|Homo sapiens protein ( Homo sapiens
cDNA FLJ90742 fis, clone PLACE1011181, weakly similar to
MSP1 PROTEIN HOMOLOG. ).
Length = 361
Score = 33.1 bits (72), Expect = 0.86
Identities = 25/82 (30%), Positives = 39/82 (47%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L YGPPG GKT A AK+ +F + L+ + D+ G Q L+ A
Sbjct: 129 VLLYGPPGCGKTLIAKATAKE--AGCRFIN--LQPSTLTDKWYG--ESQKLAAAVFSLAI 182
Query: 434 KAGPKLIILDEADAMTNDAQNA 499
K P +I +DE D+ + ++
Sbjct: 183 KLQPSIIFIDEIDSFLRNRSSS 204
>AJ010058-1|CAA08986.1| 456|Homo sapiens Nuclear matrix protein
NMP238 protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.86
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 349
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>AF380344-1|AAM45570.1| 456|Homo sapiens pontin 52 protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.86
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 349
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>AF099084-1|AAD04427.1| 456|Homo sapiens Pontin52 protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.86
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 349
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>AF070735-1|AAC77819.1| 456|Homo sapiens RuvB-like protein RUVBL1
protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.86
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 349
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>AB012122-1|BAA28169.1| 456|Homo sapiens TIP49 protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.86
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 349
+L GPPGTGKT+ LA A+++ + F MV
Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMV 97
>BC018701-1|AAH18701.1| 648|Homo sapiens ATPase family, AAA domain
containing 3B protein.
Length = 648
Score = 32.7 bits (71), Expect = 1.1
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +2
Query: 200 DDIIKTINQFMKENQLPHLLFYGPPGTGKT 289
D I T N H+L YGPPGTGKT
Sbjct: 330 DIAIATRNTKKNRGLYRHILLYGPPGTGKT 359
>BC002542-1|AAH02542.1| 648|Homo sapiens ATPase family, AAA domain
containing 3B protein.
Length = 648
Score = 32.7 bits (71), Expect = 1.1
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +2
Query: 200 DDIIKTINQFMKENQLPHLLFYGPPGTGKT 289
D I T N H+L YGPPGTGKT
Sbjct: 330 DIAIATRNTKKNRGLYRHILLYGPPGTGKT 359
>AL157945-2|CAI22068.1| 648|Homo sapiens ATPase family, AAA domain
containing 3B protein.
Length = 648
Score = 32.7 bits (71), Expect = 1.1
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +2
Query: 200 DDIIKTINQFMKENQLPHLLFYGPPGTGKT 289
D I T N H+L YGPPGTGKT
Sbjct: 330 DIAIATRNTKKNRGLYRHILLYGPPGTGKT 359
>AK024028-1|BAB14787.1| 480|Homo sapiens protein ( Homo sapiens
cDNA FLJ13966 fis, clone Y79AA1001394, weakly similar to
CELL DIVISION PROTEIN FTSH HOMOLOG (EC 3.4.24.-). ).
Length = 480
Score = 32.7 bits (71), Expect = 1.1
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +2
Query: 200 DDIIKTINQFMKENQLPHLLFYGPPGTGKT 289
D I T N H+L YGPPGTGKT
Sbjct: 162 DIAIATRNTKKNRGLYRHILLYGPPGTGKT 191
>AB033099-1|BAA86587.1| 606|Homo sapiens KIAA1273 protein protein.
Length = 606
Score = 32.7 bits (71), Expect = 1.1
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +2
Query: 200 DDIIKTINQFMKENQLPHLLFYGPPGTGKT 289
D I T N H+L YGPPGTGKT
Sbjct: 288 DIAIATRNTKKNRGLYRHILLYGPPGTGKT 317
>BC009312-1|AAH09312.1| 1003|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 1003
Score = 32.3 bits (70), Expect = 1.5
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 248 PHLLFYGPPGTGKTSTILACAKQM 319
P+++F GPPGTGKT T++ KQ+
Sbjct: 519 PYIIF-GPPGTGKTVTLVEAIKQV 541
>BC004499-1|AAH04499.2| 601|Homo sapiens MOV10 protein protein.
Length = 601
Score = 32.3 bits (70), Expect = 1.5
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 248 PHLLFYGPPGTGKTSTILACAKQM 319
P+++F GPPGTGKT T++ KQ+
Sbjct: 117 PYIIF-GPPGTGKTVTLVEAIKQV 139
>BC002548-1|AAH02548.1| 1003|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 1003
Score = 32.3 bits (70), Expect = 1.5
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 248 PHLLFYGPPGTGKTSTILACAKQM 319
P+++F GPPGTGKT T++ KQ+
Sbjct: 519 PYIIF-GPPGTGKTVTLVEAIKQV 541
>AL603832-3|CAI14056.1| 947|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 947
Score = 32.3 bits (70), Expect = 1.5
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 248 PHLLFYGPPGTGKTSTILACAKQM 319
P+++F GPPGTGKT T++ KQ+
Sbjct: 463 PYIIF-GPPGTGKTVTLVEAIKQV 485
>AL603832-2|CAI14055.1| 1003|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 1003
Score = 32.3 bits (70), Expect = 1.5
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 248 PHLLFYGPPGTGKTSTILACAKQM 319
P+++F GPPGTGKT T++ KQ+
Sbjct: 519 PYIIF-GPPGTGKTVTLVEAIKQV 541
>AK074174-1|BAB85000.1| 925|Homo sapiens FLJ00247 protein protein.
Length = 925
Score = 32.3 bits (70), Expect = 1.5
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 248 PHLLFYGPPGTGKTSTILACAKQM 319
P+++F GPPGTGKT T++ KQ+
Sbjct: 544 PYIIF-GPPGTGKTVTLVEAIKQV 566
>AB046851-1|BAB13457.1| 1032|Homo sapiens KIAA1631 protein protein.
Length = 1032
Score = 32.3 bits (70), Expect = 1.5
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 248 PHLLFYGPPGTGKTSTILACAKQM 319
P+++F GPPGTGKT T++ KQ+
Sbjct: 548 PYIIF-GPPGTGKTVTLVEAIKQV 570
>BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein.
Length = 475
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 173 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 316
+ L +LV + ++ ++F+K P +LFYGPPG GKT A A +
Sbjct: 156 RELQELVQYP--VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 203
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 173 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 316
+ L +LV + ++ ++F+K P +LFYGPPG GKT A A +
Sbjct: 487 RELQELVQYP--VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
>BC113656-1|AAI13657.1| 1390|Homo sapiens ATPase family, AAA domain
containing 2 protein.
Length = 1390
Score = 31.9 bits (69), Expect = 2.0
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASD-DRGIGIVRGQI-LSFASTRTI 430
LFYGPPGTGKT A A + + + + A + +G Q+ L F
Sbjct: 464 LFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQA--- 520
Query: 431 FKAGPKLIILDEADAM 478
++ P +I DE D +
Sbjct: 521 YQMRPSIIFFDEIDGL 536
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 173 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 316
+ L +LV + ++ ++F+K P +LFYGPPG GKT A A +
Sbjct: 487 RELQELVQYP--VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 173 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 316
+ L +LV + ++ ++F+K P +LFYGPPG GKT A A +
Sbjct: 325 RELQELVQYP--VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 372
>BC007123-1|AAH07123.1| 939|Homo sapiens ATAD2 protein protein.
Length = 939
Score = 31.9 bits (69), Expect = 2.0
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASD-DRGIGIVRGQI-LSFASTRTI 430
LFYGPPGTGKT A A + + + + A + +G Q+ L F
Sbjct: 464 LFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQA--- 520
Query: 431 FKAGPKLIILDEADAM 478
++ P +I DE D +
Sbjct: 521 YQMRPSIIFFDEIDGL 536
>AY598335-1|AAT06746.1| 1390|Homo sapiens L16 protein.
Length = 1390
Score = 31.9 bits (69), Expect = 2.0
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASD-DRGIGIVRGQI-LSFASTRTI 430
LFYGPPGTGKT A A + + + + A + +G Q+ L F
Sbjct: 464 LFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQA--- 520
Query: 431 FKAGPKLIILDEADAM 478
++ P +I DE D +
Sbjct: 521 YQMRPSIIFFDEIDGL 536
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 173 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 316
+ L +LV + ++ ++F+K P +LFYGPPG GKT A A +
Sbjct: 487 RELQELVQYP--VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
>AK097133-1|BAC04959.1| 978|Homo sapiens protein ( Homo sapiens
cDNA FLJ39814 fis, clone SPLEN2009970, weakly similar to
TAT-BINDING HOMOLOG 7. ).
Length = 978
Score = 31.9 bits (69), Expect = 2.0
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASD-DRGIGIVRGQI-LSFASTRTI 430
LFYGPPGTGKT A A + + + + A + +G Q+ L F
Sbjct: 464 LFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQA--- 520
Query: 431 FKAGPKLIILDEADAM 478
++ P +I DE D +
Sbjct: 521 YQMRPSIIFFDEIDGL 536
>AK094821-1|BAC04429.1| 574|Homo sapiens protein ( Homo sapiens
cDNA FLJ37502 fis, clone BRAWH2016446, moderately
similar to TAT-BINDING HOMOLOG 7. ).
Length = 574
Score = 31.9 bits (69), Expect = 2.0
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASD-DRGIGIVRGQILSFASTRTIF 433
LFYGPPGTGKT A A + + + + A + +G Q+ +
Sbjct: 438 LFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLM 497
Query: 434 KAGPKLIILDEADAM 478
+ P +I DE D +
Sbjct: 498 R--PSIIFFDEIDGL 510
>AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ12286 fis, clone MAMMA1001768, weakly similar to
CELL DIVISION CYCLE PROTEIN 48 HOMOLOG MJ1156. ).
Length = 392
Score = 31.9 bits (69), Expect = 2.0
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTP-QQFSSMVLELNASDDRGIGIVRGQILSFASTRTI 430
+L GPPG GKT + A A+ S+ L+ + + + R F R +
Sbjct: 237 VLLAGPPGVGKTQLVQAVARGAGAELLAVSAPALQGSRPGETEENVRR----VFQRAREL 292
Query: 431 FKAGPKLIILDEADAM 478
GP L+ LDE DA+
Sbjct: 293 ASRGPSLLFLDEMDAL 308
>AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing protein
protein.
Length = 305
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 173 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 316
+ L +LV + ++ ++F+K P +LFYGPPG GKT A A +
Sbjct: 115 RELQELVQYP--VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 162
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 173 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 316
+ L +LV + ++ ++F+K P +LFYGPPG GKT A A +
Sbjct: 487 RELQELVQYP--VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 173 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 316
+ L +LV + ++ ++F+K P +LFYGPPG GKT A A +
Sbjct: 487 RELQELVQYP--VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
>D29677-1|BAA06147.2| 1943|Homo sapiens KIAA0054 protein.
Length = 1943
Score = 31.5 bits (68), Expect = 2.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 242 QLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 334
QLP +L GP GTGKT T+ K + Q+
Sbjct: 661 QLPPVLIIGPYGTGKTFTLAQAVKHILQQQE 691
>BC130582-1|AAI30583.1| 1942|Homo sapiens helicase with zinc finger
protein.
Length = 1942
Score = 31.5 bits (68), Expect = 2.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 242 QLPHLLFYGPPGTGKTSTILACAKQMYTPQQ 334
QLP +L GP GTGKT T+ K + Q+
Sbjct: 660 QLPPVLIIGPYGTGKTFTLAQAVKHILQQQE 690
>BC063607-1|AAH63607.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 31.5 bits (68), Expect = 2.6
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +2
Query: 200 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 379
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 330 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 387
Query: 380 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 538
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 388 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 430
>BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein.
Length = 695
Score = 31.5 bits (68), Expect = 2.6
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASD--DRGIGIVRGQILSFASTRT 427
+L YGPPGTGKT A A ++ + V +N + + G ++ + T
Sbjct: 389 VLLYGPPGTGKTMIARAVANEV------GAYVSVINGPEIISKFYGETEAKLRQIFAEAT 442
Query: 428 IFKAGPKLIILDEADAMTNDAQNALRRI 511
+ P +I +DE DA+ + A +
Sbjct: 443 L--RHPSIIFIDELDALCPKREGAQNEV 468
>BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-like
2 protein.
Length = 466
Score = 31.5 bits (68), Expect = 2.6
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRT 427
LL YGPPGTGKT A A + T +S ++ D + V ++ + + T
Sbjct: 218 LLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPST 277
Query: 428 IFKAGPKLIILDEADAMTNDAQNALR 505
IF + ++ A + + +LR
Sbjct: 278 IFLDELESVMSQRGTASGGEHEGSLR 303
>BC033109-1|AAH33109.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 31.5 bits (68), Expect = 2.6
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +2
Query: 200 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 379
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 330 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 387
Query: 380 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 538
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 388 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 430
>BC014101-1|AAH14101.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 31.5 bits (68), Expect = 2.6
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +2
Query: 200 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 379
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 330 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 387
Query: 380 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 538
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 388 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 430
>BC011814-1|AAH11814.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 31.5 bits (68), Expect = 2.6
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +2
Query: 200 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 379
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 330 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 387
Query: 380 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 538
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 388 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 430
>BC007803-1|AAH07803.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 31.5 bits (68), Expect = 2.6
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +2
Query: 200 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 379
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 330 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 387
Query: 380 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 538
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 388 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 430
>AL645728-11|CAI22954.1| 634|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 634
Score = 31.5 bits (68), Expect = 2.6
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +2
Query: 200 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 379
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 378 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 435
Query: 380 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 538
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 436 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 478
>AL645728-10|CAI22955.1| 586|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 586
Score = 31.5 bits (68), Expect = 2.6
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +2
Query: 200 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 379
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 330 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 387
Query: 380 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 538
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 388 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 430
>AL645728-9|CAI22953.1| 571|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 571
Score = 31.5 bits (68), Expect = 2.6
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +2
Query: 200 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 379
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 315 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 372
Query: 380 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 538
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 373 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 415
>AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens
cDNA FLJ34065 fis, clone FCBBF3000536, highly similar to
Mus musculus spermatogenesis associated factor (SPAF)
mRNA. ).
Length = 893
Score = 31.5 bits (68), Expect = 2.6
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASD--DRGIGIVRGQILSFASTRT 427
+L YGPPGTGKT A A ++ + V +N + + G ++ + T
Sbjct: 390 VLLYGPPGTGKTMIARAVANEV------GAYVSVINGPEIISKFYGETEAKLRQIFAEAT 443
Query: 428 IFKAGPKLIILDEADAMTNDAQNALRRI 511
+ P +I +DE DA+ + A +
Sbjct: 444 L--RHPSIIFIDELDALCPKREGAQNEV 469
>AK091144-1|BAC03595.1| 634|Homo sapiens protein ( Homo sapiens
cDNA FLJ33825 fis, clone CTONG2003375, moderately
similar to Drosophila melanogaster AAA family protein
Bor (bor) mRNA. ).
Length = 634
Score = 31.5 bits (68), Expect = 2.6
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +2
Query: 200 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 379
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 378 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 435
Query: 380 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 538
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 436 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 478
>AK001571-1|BAA91764.1| 586|Homo sapiens protein ( Homo sapiens
cDNA FLJ10709 fis, clone NT2RP3000869. ).
Length = 586
Score = 31.5 bits (68), Expect = 2.6
Identities = 32/113 (28%), Positives = 52/113 (46%)
Frame = +2
Query: 200 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG 379
D I T N + ++L YGPPGTGK T+ A +++ ++ M A R
Sbjct: 330 DIAIATRNTKKNRSLYRNILMYGPPGTGK--TLFAKKLALHSGMDYAIMTGGDVAPMGRE 387
Query: 380 IGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVR 538
++ +A+T + G L+ +DEADA +R EK +E++R
Sbjct: 388 GVTAMHKLFDWANTS---RRG-LLLFVDEADAFLR------KRATEKISEDLR 430
>AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associated
factor protein protein.
Length = 790
Score = 31.5 bits (68), Expect = 2.6
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASD--DRGIGIVRGQILSFASTRT 427
+L YGPPGTGKT A A ++ + V +N + + G ++ + T
Sbjct: 390 VLLYGPPGTGKTMIARAVANEV------GAYVSVINGPEIISKFYGETEAKLRQIFAEAT 443
Query: 428 IFKAGPKLIILDEADAMTNDAQNALRRI 511
+ P +I +DE DA+ + A +
Sbjct: 444 L--RHPSIIFIDELDALCPKREGAQNEV 469
>AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associated
factor protein.
Length = 893
Score = 31.5 bits (68), Expect = 2.6
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASD--DRGIGIVRGQILSFASTRT 427
+L YGPPGTGKT A A ++ + V +N + + G ++ + T
Sbjct: 390 VLLYGPPGTGKTMIARAVANEV------GAYVSVINGPEIISKFYGETEAKLRQIFAEAT 443
Query: 428 IFKAGPKLIILDEADAMTNDAQNALRRI 511
+ P +I +DE DA+ + A +
Sbjct: 444 L--RHPSIIFIDELDALCPKREGAQNEV 469
>D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42
protein.
Length = 389
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQM 319
L YGPPGTGKT A A Q+
Sbjct: 171 LLYGPPGTGKTLLARAVASQL 191
>CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein.
Length = 389
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQM 319
L YGPPGTGKT A A Q+
Sbjct: 171 LLYGPPGTGKTLLARAVASQL 191
>BT007259-1|AAP35923.1| 665|Homo sapiens kinesin-like 4 protein.
Length = 665
Score = 30.7 bits (66), Expect = 4.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 209 IKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQ 316
++ I + + E Q +L YGP G GKT T+L +Q
Sbjct: 108 VQPILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQ 143
>BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQM 319
L YGPPGTGKT A A Q+
Sbjct: 171 LLYGPPGTGKTLLARAVASQL 191
>BC106017-1|AAI06018.1| 867|Homo sapiens SETX protein protein.
Length = 867
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQ 334
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 150 LIHGPPGTGKSKTIVGLLYRLLTENQ 175
>BC078166-1|AAH78166.1| 917|Homo sapiens SETX protein protein.
Length = 917
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQ 334
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 200 LIHGPPGTGKSKTIVGLLYRLLTENQ 225
>BC032622-1|AAH32622.2| 1030|Homo sapiens SETX protein protein.
Length = 1030
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQ 334
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 313 LIHGPPGTGKSKTIVGLLYRLLTENQ 338
>BC032600-1|AAH32600.1| 828|Homo sapiens SETX protein protein.
Length = 828
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQ 334
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 111 LIHGPPGTGKSKTIVGLLYRLLTENQ 136
>BC028155-1|AAH28155.1| 665|Homo sapiens kinesin family member 22
protein.
Length = 665
Score = 30.7 bits (66), Expect = 4.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 209 IKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQ 316
++ I + + E Q +L YGP G GKT T+L +Q
Sbjct: 108 VQPILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQ 143
>BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQM 319
L YGPPGTGKT A A Q+
Sbjct: 171 LLYGPPGTGKTLLARAVASQL 191
>BC004352-1|AAH04352.1| 665|Homo sapiens kinesin family member 22
protein.
Length = 665
Score = 30.7 bits (66), Expect = 4.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 209 IKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQ 316
++ I + + E Q +L YGP G GKT T+L +Q
Sbjct: 108 VQPILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQ 143
>AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor apraxia
protein 2 protein.
Length = 2677
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQ 334
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 1960 LIHGPPGTGKSKTIVGLLYRLLTENQ 1985
>AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQ 334
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 1960 LIHGPPGTGKSKTIVGLLYRLLTENQ 1985
>AL159997-5|CAI40857.1| 948|Homo sapiens senataxin protein.
Length = 948
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQ 334
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 202 LIHGPPGTGKSKTIVGLLYRLLTENQ 227
>AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQ 334
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 1960 LIHGPPGTGKSKTIVGLLYRLLTENQ 1985
>AK223431-1|BAD97151.1| 665|Homo sapiens kinesin family member 22
variant protein.
Length = 665
Score = 30.7 bits (66), Expect = 4.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 209 IKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQ 316
++ I + + E Q +L YGP G GKT T+L +Q
Sbjct: 108 VQPILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQ 143
>AK001456-1|BAA91701.1| 828|Homo sapiens protein ( Homo sapiens
cDNA FLJ10594 fis, clone NT2RP2004689. ).
Length = 828
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQ 334
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 111 LIHGPPGTGKSKTIVGLLYRLLTENQ 136
>AF343078-1|AAK38647.1| 578|Homo sapiens TOB3 protein.
Length = 578
Score = 30.7 bits (66), Expect = 4.6
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +2
Query: 200 DDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMV-LELNASDDR 376
D I T+N + ++L YGPPG GK T+ A +++ ++ M ++ +
Sbjct: 329 DIAIATLNTKKNRSLFRNILMYGPPGPGK--TLFAKKLPLHSGMDYAIMTGGDVAPMGGK 386
Query: 377 GIGIVRGQILSFASTRTIFKAGPKLIILDEADA 475
G+ + ++ +A+T + G L+ +DEADA
Sbjct: 387 GVTAMH-KLFDWANTS---RRG-LLLFMDEADA 414
>AF136523-1|AAD28285.1| 1321|Homo sapiens bile salt export pump
protein.
Length = 1321
Score = 30.7 bits (66), Expect = 4.6
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +2
Query: 296 ILACAKQMYTPQQFSSMVLELNAS-DDRGIGIVRGQILSFASTRTIFKAGPKLIILDEA- 469
++A AKQ S+ + + +G + RG+ A R I + PK+++LDEA
Sbjct: 1188 VIAAAKQAQLHDFVMSLPEKYETNVGSQGSQLSRGEKQRIAIARAIVR-DPKILLLDEAT 1246
Query: 470 DAMTNDAQNALRRIIEKYTENVRFCII 550
A+ +++ ++ ++K E R CI+
Sbjct: 1247 SALDTESEKTVQVALDKAREG-RTCIV 1272
>AF091582-1|AAC77455.1| 1321|Homo sapiens bile salt export pump
protein.
Length = 1321
Score = 30.7 bits (66), Expect = 4.6
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +2
Query: 296 ILACAKQMYTPQQFSSMVLELNAS-DDRGIGIVRGQILSFASTRTIFKAGPKLIILDEA- 469
++A AKQ S+ + + +G + RG+ A R I + PK+++LDEA
Sbjct: 1188 VIAAAKQAQLHDFVMSLPEKYETNVGSQGSQLSRGEKQRIAIARAIVR-DPKILLLDEAT 1246
Query: 470 DAMTNDAQNALRRIIEKYTENVRFCII 550
A+ +++ ++ ++K E R CI+
Sbjct: 1247 SALDTESEKTVQVALDKAREG-RTCIV 1272
>AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulatory
subunit protein.
Length = 389
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQM 319
L YGPPGTGKT A A Q+
Sbjct: 171 LLYGPPGTGKTLLARAVASQL 191
>AC069137-4|AAY24100.1| 451|Homo sapiens unknown protein.
Length = 451
Score = 30.7 bits (66), Expect = 4.6
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +2
Query: 296 ILACAKQMYTPQQFSSMVLELNAS-DDRGIGIVRGQILSFASTRTIFKAGPKLIILDEA- 469
++A AKQ S+ + + +G + RG+ A R I + PK+++LDEA
Sbjct: 318 VIAAAKQAQLHDFVMSLPEKYETNVGSQGSQLSRGEKQRIAIARAIVR-DPKILLLDEAT 376
Query: 470 DAMTNDAQNALRRIIEKYTENVRFCII 550
A+ +++ ++ ++K E R CI+
Sbjct: 377 SALDTESEKTVQVALDKAREG-RTCIV 402
>AC002301-2|AAC08709.1| 198|Homo sapiens Similar to kinesin-like
DNA binding protein (KID) protein.
Length = 198
Score = 30.7 bits (66), Expect = 4.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 209 IKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQ 316
++ I + + E Q +L YGP G GKT T+L +Q
Sbjct: 108 VQPILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQ 143
>AB017430-1|BAA33019.2| 665|Homo sapiens kinesin-like DNA binding
protein protein.
Length = 665
Score = 30.7 bits (66), Expect = 4.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 209 IKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQ 316
++ I + + E Q +L YGP G GKT T+L +Q
Sbjct: 108 VQPILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQ 143
>AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein.
Length = 2663
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQ 334
L +GPPGTGK+ TI+ ++ T Q
Sbjct: 1946 LIHGPPGTGKSKTIVGLLYRLLTENQ 1971
>U96131-1|AAB64095.1| 432|Homo sapiens HPV16 E1 protein binding
protein protein.
Length = 432
Score = 30.3 bits (65), Expect = 6.1
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQM 319
+L +GPPGTGKTS A A+++
Sbjct: 175 VLLHGPPGTGKTSLCKALAQKL 196
>L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulatory
subunit protein.
Length = 440
Score = 30.3 bits (65), Expect = 6.1
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
++ YGPPGTGKT A A Q S+ L + S+ + G L R
Sbjct: 222 VILYGPPGTGKTLLAKAVANQT------SATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 434 KAGPKLIILDEADAM 478
+ P ++ +DE DA+
Sbjct: 276 EHAPSIVFIDEIDAI 290
>CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 6.1
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
++ YGPPGTGKT A A Q S+ L + S+ + G L R
Sbjct: 222 VILYGPPGTGKTLLAKAVANQT------SATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 434 KAGPKLIILDEADAM 478
+ P ++ +DE DA+
Sbjct: 276 EHAPSIVFIDEIDAI 290
>CR456744-1|CAG33025.1| 432|Homo sapiens TRIP13 protein.
Length = 432
Score = 30.3 bits (65), Expect = 6.1
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQM 319
+L +GPPGTGKTS A A+++
Sbjct: 175 VLLHGPPGTGKTSLCKALAQKL 196
>BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 6.1
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
++ YGPPGTGKT A A Q S+ L + S+ + G L R
Sbjct: 222 VILYGPPGTGKTLLAKAVANQT------SATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 434 KAGPKLIILDEADAM 478
+ P ++ +DE DA+
Sbjct: 276 EHAPSIVFIDEIDAI 290
>BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 6.1
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
++ YGPPGTGKT A A Q S+ L + S+ + G L R
Sbjct: 222 VILYGPPGTGKTLLAKAVANQT------SATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 434 KAGPKLIILDEADAM 478
+ P ++ +DE DA+
Sbjct: 276 EHAPSIVFIDEIDAI 290
>BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 6.1
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
++ YGPPGTGKT A A Q S+ L + S+ + G L R
Sbjct: 222 VILYGPPGTGKTLLAKAVANQT------SATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 434 KAGPKLIILDEADAM 478
+ P ++ +DE DA+
Sbjct: 276 EHAPSIVFIDEIDAI 290
>BC024032-1|AAH24032.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 318 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 371
Query: 434 KAGPKLIILDEADAM 478
P +I +DE D++
Sbjct: 372 ANAPCVIFIDELDSV 386
>BC023507-1|AAH23507.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 318 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 371
Query: 434 KAGPKLIILDEADAM 478
P +I +DE D++
Sbjct: 372 ANAPCVIFIDELDSV 386
>BC019294-1|AAH19294.1| 432|Homo sapiens thyroid hormone receptor
interactor 13 protein.
Length = 432
Score = 30.3 bits (65), Expect = 6.1
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQM 319
+L +GPPGTGKTS A A+++
Sbjct: 175 VLLHGPPGTGKTSLCKALAQKL 196
>BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 6.1
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
++ YGPPGTGKT A A Q S+ L + S+ + G L R
Sbjct: 222 VILYGPPGTGKTLLAKAVANQT------SATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 434 KAGPKLIILDEADAM 478
+ P ++ +DE DA+
Sbjct: 276 EHAPSIVFIDEIDAI 290
>BC007795-1|AAH07795.1| 740|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 740
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 375 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 428
Query: 434 KAGPKLIILDEADAM 478
P +I +DE D++
Sbjct: 429 ANAPCVIFIDELDSV 443
>BC007500-1|AAH07500.1| 419|Homo sapiens BCS1-like (yeast) protein.
Length = 419
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDR 376
L YGPPG GK+S I A A ++ S+ + + SDDR
Sbjct: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLT-DSSLSDDR 265
>BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 6.1
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
++ YGPPGTGKT A A Q S+ L + S+ + G L R
Sbjct: 222 VILYGPPGTGKTLLAKAVANQT------SATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 434 KAGPKLIILDEADAM 478
+ P ++ +DE DA+
Sbjct: 276 EHAPSIVFIDEIDAI 290
>BC000416-1|AAH00416.1| 419|Homo sapiens BCS1-like (yeast) protein.
Length = 419
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDR 376
L YGPPG GK+S I A A ++ S+ + + SDDR
Sbjct: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLT-DSSLSDDR 265
>BC000404-1|AAH00404.1| 432|Homo sapiens thyroid hormone receptor
interactor 13 protein.
Length = 432
Score = 30.3 bits (65), Expect = 6.1
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQM 319
+L +GPPGTGKTS A A+++
Sbjct: 175 VLLHGPPGTGKTSLCKALAQKL 196
>AY358484-1|AAQ88848.1| 716|Homo sapiens YME1L1 protein.
Length = 716
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 318 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 371
Query: 434 KAGPKLIILDEADAM 478
P +I +DE D++
Sbjct: 372 ANAPCVIFIDELDSV 386
>AL162272-2|CAI12217.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 318 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 371
Query: 434 KAGPKLIILDEADAM 478
P +I +DE D++
Sbjct: 372 ANAPCVIFIDELDSV 386
>AL162272-1|CAC19650.2| 773|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 773
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 375 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 428
Query: 434 KAGPKLIILDEADAM 478
P +I +DE D++
Sbjct: 429 ANAPCVIFIDELDSV 443
>AL160291-4|CAI16906.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 318 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 371
Query: 434 KAGPKLIILDEADAM 478
P +I +DE D++
Sbjct: 372 ANAPCVIFIDELDSV 386
>AL160291-3|CAI16907.1| 773|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 773
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 375 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 428
Query: 434 KAGPKLIILDEADAM 478
P +I +DE D++
Sbjct: 429 ANAPCVIFIDELDSV 443
>AK223518-1|BAD97238.1| 419|Homo sapiens BCS1-like variant protein.
Length = 419
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDR 376
L YGPPG GK+S I A A ++ S+ + + SDDR
Sbjct: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLT-DSSLSDDR 265
>AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase
subunit 1 variant protein.
Length = 440
Score = 30.3 bits (65), Expect = 6.1
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
++ YGPPGTGKT A A Q S+ L + S+ + G L R
Sbjct: 222 VILYGPPGTGKTLLAKAVANQT------SATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 434 KAGPKLIILDEADAM 478
+ P ++ +DE DA+
Sbjct: 276 EHAPSIVFIDEIDAI 290
>AJ132637-1|CAB51858.1| 716|Homo sapiens ATP-dependent
metalloprotease YME1L protein.
Length = 716
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 318 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 371
Query: 434 KAGPKLIILDEADAM 478
P +I +DE D++
Sbjct: 372 ANAPCVIFIDELDSV 386
>AF516670-1|AAN05490.1| 419|Homo sapiens BCS1-like protein protein.
Length = 419
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDR 376
L YGPPG GK+S I A A ++ S+ + + SDDR
Sbjct: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLT-DSSLSDDR 265
>AF346835-1|AAK29417.1| 419|Homo sapiens BCS1 protein.
Length = 419
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDR 376
L YGPPG GK+S I A A ++ S+ + + SDDR
Sbjct: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLT-DSSLSDDR 265
>AF151782-1|AAK57555.1| 773|Homo sapiens ATP-dependent
metalloprotease FtsH1 homolog protein.
Length = 773
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L GPPGTGKT A A + P ++S + D+ +G+ +I + R
Sbjct: 375 ILLVGPPGTGKTLLARAVAGEADVPFYYASG----SEFDEMFVGVGASRIRNL--FREAK 428
Query: 434 KAGPKLIILDEADAM 478
P +I +DE D++
Sbjct: 429 ANAPCVIFIDELDSV 443
>AF038195-1|AAB97365.1| 419|Homo sapiens unknown protein.
Length = 419
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDR 376
L YGPPG GK+S I A A ++ S+ + + SDDR
Sbjct: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLT-DSSLSDDR 265
>AF026849-1|AAD08638.1| 419|Homo sapiens h-bcs1 protein.
Length = 419
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDR 376
L YGPPG GK+S I A A ++ S+ + + SDDR
Sbjct: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLT-DSSLSDDR 265
>U27515-1|AAC99817.1| 418|Homo sapiens MIP224 protein.
Length = 418
Score = 29.9 bits (64), Expect = 8.0
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L YGPPG GK T+LA A +T F +V S+ + G + R
Sbjct: 202 VLMYGPPGCGK--TMLAKAVAHHTTAAFIRVV----GSEFVQKYLGEGPRMVRDVFRLAK 255
Query: 434 KAGPKLIILDEADAMTN---DAQNALRRIIEK 520
+ P +I +DE DA+ DAQ R +++
Sbjct: 256 ENAPAIIFIDEIDAIATKRFDAQTGADREVQR 287
>BT007232-1|AAP35896.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 29.9 bits (64), Expect = 8.0
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L YGPPG GK T+LA A +T F +V S+ + G + R
Sbjct: 202 VLMYGPPGCGK--TMLAKAVAHHTTAAFIRVV----GSEFVQKYLGEGPRMVRDVFRLAK 255
Query: 434 KAGPKLIILDEADAMTN---DAQNALRRIIEK 520
+ P +I +DE DA+ DAQ R +++
Sbjct: 256 ENAPAIIFIDEIDAIATKRFDAQTGADREVQR 287
>BC014488-1|AAH14488.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 29.9 bits (64), Expect = 8.0
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L YGPPG GK T+LA A +T F +V S+ + G + R
Sbjct: 202 VLMYGPPGCGK--TMLAKAVAHHTTAAFIRVV----GSEFVQKYLGEGPRMVRDVFRLAK 255
Query: 434 KAGPKLIILDEADAMTN---DAQNALRRIIEK 520
+ P +I +DE DA+ DAQ R +++
Sbjct: 256 ENAPAIIFIDEIDAIATKRFDAQTGADREVQR 287
>BC010396-1|AAH10396.1| 387|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 387
Score = 29.9 bits (64), Expect = 8.0
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L YGPPG GK T+LA A +T F +V S+ + G + R
Sbjct: 171 VLMYGPPGCGK--TMLAKAVAHHTTAAFIRVV----GSEFVQKYLGEGPRMVRDVFRLAK 224
Query: 434 KAGPKLIILDEADAMTN---DAQNALRRIIEK 520
+ P +I +DE DA+ DAQ R +++
Sbjct: 225 ENAPAIIFIDEIDAIATKRFDAQTGADREVQR 256
>BC000343-1|AAH00343.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 29.9 bits (64), Expect = 8.0
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L YGPPG GK T+LA A +T F +V S+ + G + R
Sbjct: 202 VLMYGPPGCGK--TMLAKAVAHHTTAAFIRVV----GSEFVQKYLGEGPRMVRDVFRLAK 255
Query: 434 KAGPKLIILDEADAMTN---DAQNALRRIIEK 520
+ P +I +DE DA+ DAQ R +++
Sbjct: 256 ENAPAIIFIDEIDAIATKRFDAQTGADREVQR 287
>AF020736-1|AAC32612.1| 418|Homo sapiens ATPase homolog protein.
Length = 418
Score = 29.9 bits (64), Expect = 8.0
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L YGPPG GK T+LA A +T F +V S+ + G + R
Sbjct: 202 VLMYGPPGCGK--TMLAKAVAHHTTAAFIRVV----GSEFVQKYLGEGPRMVRDVFRLAK 255
Query: 434 KAGPKLIILDEADAMTN---DAQNALRRIIEK 520
+ P +I +DE DA+ DAQ R +++
Sbjct: 256 ENAPAIIFIDEIDAIATKRFDAQTGADREVQR 287
>AC007842-2|AAD39267.1| 418|Homo sapiens ATPase homolog [Homo
sapiens] protein.
Length = 418
Score = 29.9 bits (64), Expect = 8.0
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L YGPPG GK T+LA A +T F +V S+ + G + R
Sbjct: 202 VLMYGPPGCGK--TMLAKAVAHHTTAAFIRVV----GSEFVQKYLGEGPRMVRDVFRLAK 255
Query: 434 KAGPKLIILDEADAMTN---DAQNALRRIIEK 520
+ P +I +DE DA+ DAQ R +++
Sbjct: 256 ENAPAIIFIDEIDAIATKRFDAQTGADREVQR 287
>AB201715-1|BAE46995.1| 2649|Homo sapiens PPAR gamma DBD-interacting
protein1 beta protein.
Length = 2649
Score = 29.9 bits (64), Expect = 8.0
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 242 QLPHLLFYGPPGTGKTSTI-LACAKQMYTPQQFSSMVLELNASDD 373
++P LL YGP GTGKT T+ +A + + P+ + N++ D
Sbjct: 536 RVPPLLIYGPFGTGKTYTLAMASLEVIRRPETKVLICTHTNSAAD 580
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,716,651
Number of Sequences: 237096
Number of extensions: 1825645
Number of successful extensions: 4188
Number of sequences better than 10.0: 230
Number of HSP's better than 10.0 without gapping: 3939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4157
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -