Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16e22
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 252 1e-67
U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna replic... 168 3e-42
AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna repl... 156 1e-38
Z70307-13|CAA94339.1| 354|Caenorhabditis elegans Hypothetical p... 77 1e-14
Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 32 2e-04
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 35 0.043
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 35 0.043
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 34 0.075
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 34 0.075
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 34 0.075
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 34 0.075
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 34 0.075
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 34 0.075
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 34 0.075
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 34 0.099
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 33 0.23
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 33 0.23
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 32 0.40
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 32 0.40
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 31 0.93
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 31 0.93
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 31 0.93
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 31 0.93
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 31 0.93
Z81521-2|CAB04224.1| 514|Caenorhabditis elegans Hypothetical pr... 30 1.2
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 30 1.2
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 30 1.2
AF076840-1|AAC95522.1| 514|Caenorhabditis elegans Rad17-like pr... 30 1.2
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 30 1.6
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 30 1.6
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 29 2.1
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 29 2.1
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 29 2.1
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 29 2.1
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 29 2.1
Z70680-8|CAA94570.2| 349|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 29 2.8
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 29 2.8
Z99281-28|CAB16503.1| 633|Caenorhabditis elegans Hypothetical p... 29 3.7
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z77666-2|CAB01233.2| 80|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z54271-8|CAA91038.1| 185|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 29 3.7
AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical ... 28 4.9
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 28 4.9
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 28 4.9
U29613-3|AAC47062.2| 483|Caenorhabditis elegans Hypothetical pr... 28 6.5
U29244-14|AAC71095.1| 774|Caenorhabditis elegans Fzo (fzo mitoc... 28 6.5
AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical ... 28 6.5
AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb (recombi... 28 6.5
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 28 6.5
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 28 6.5
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 27 8.6
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 27 8.6
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 252 bits (618), Expect = 1e-67
Identities = 118/178 (66%), Positives = 143/178 (80%), Gaps = 9/178 (5%)
Frame = +2
Query: 134 TGQNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAK 313
T NLPWVEKYRP +LD+LV+H+ I+KT+ +F++ LPHLLFYGPPGTGKT+T+LA A+
Sbjct: 25 TASNLPWVEKYRPSKLDELVAHEQIVKTLTKFIENRTLPHLLFYGPPGTGKTTTVLAAAR 84
Query: 314 QMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTR------TIFKAGP---KLIILDE 466
QMY+P + +SMVLELNASD+RGI +VR I++FA T+ T G KL+ILDE
Sbjct: 85 QMYSPTKMASMVLELNASDERGIDVVRNTIVNFAQTKGLQAFSTSSNTGTVPFKLVILDE 144
Query: 467 ADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVP 640
ADAMT DAQNALRR+IEKYT+NVRFCIICNYL I+PA+QSRCTRFRFAPL Q IVP
Sbjct: 145 ADAMTKDAQNALRRVIEKYTDNVRFCIICNYLASIVPAIQSRCTRFRFAPLDQKLIVP 202
>U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 4 protein.
Length = 334
Score = 168 bits (409), Expect = 3e-42
Identities = 80/165 (48%), Positives = 110/165 (66%), Gaps = 7/165 (4%)
Frame = +2
Query: 146 LPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYT 325
L W EKYRPK LDD+ D+++ + ++ LPHLLFYGPPGTGKTS LA +Q++
Sbjct: 15 LTWTEKYRPKTLDDIAYQDEVVTMLKGALQGRDLPHLLFYGPPGTGKTSAALAFCRQLFP 74
Query: 326 PQQFSSMVLELNASDDRGIGIVRGQILSFAST-------RTIFKAGPKLIILDEADAMTN 484
F VL+LNASD+RGI +VR +I SF+ + + K K+IILDE DAMT
Sbjct: 75 KNIFHDRVLDLNASDERGIAVVRQKIQSFSKSSLGHSHREDVLKL--KIIILDEVDAMTR 132
Query: 485 DAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPL 619
+AQ A+RR+IE +++ RF +ICNY+ ++IP + SRC +FRF L
Sbjct: 133 EAQAAMRRVIEDFSKTTRFILICNYVSRLIPPVVSRCAKFRFKSL 177
>AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 2 protein.
Length = 334
Score = 156 bits (378), Expect = 1e-38
Identities = 78/174 (44%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Frame = +2
Query: 119 MTVGETGQNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTI 298
M+ E Q PWVEKYRPK L D+V +++I++ + E +P+++ GPPG GKT+++
Sbjct: 1 MSKSEKQQLAPWVEKYRPKVLADIVGNENIVERLKVIGHEGNVPNIVLSGPPGCGKTTSV 60
Query: 299 LACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGP-KLIILDEADA 475
A A+++ + VLELNASD+RGI +VR +I +FA T+ G K+IILDEAD+
Sbjct: 61 WALARELLG-DKVKEAVLELNASDERGIDVVRHRIKTFAQTKVTLPEGRHKIIILDEADS 119
Query: 476 MTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIV 637
MT+ AQ ALRR +E YT+ RF + CN KII +QSRC R+ L Q++
Sbjct: 120 MTDGAQQALRRTMEMYTKTTRFALACNQSEKIIEPIQSRCALLRYTKLSPVQLL 173
>Z70307-13|CAA94339.1| 354|Caenorhabditis elegans Hypothetical
protein C39E9.13 protein.
Length = 354
Score = 77.0 bits (181), Expect = 1e-14
Identities = 63/190 (33%), Positives = 90/190 (47%), Gaps = 31/190 (16%)
Frame = +2
Query: 152 WVEKYRPKRLDDLVSHDDIIKTIN--QFMKENQLPHLLFYGPPGTGKTSTILACAKQMY- 322
WV+KYRPK L D I+ N +F+ + +PHLLF GP G GK + I +++Y
Sbjct: 4 WVDKYRPKDLLGKDGVDYHIEQANHLKFLSADCMPHLLFCGPSGAGKKTRIKCLLRELYG 63
Query: 323 --------TPQQFSS---MVLELNA----------SDDRGIG---IVRGQILSFASTRTI 430
+ F+S LE+ D GI +V+ + A T I
Sbjct: 64 VGVEKTQLIMKSFTSPSNKKLEIQTVSSNYHIEMTPSDVGIYDRVVVQDLVKEMAQTSQI 123
Query: 431 FKAGP---KLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTR 601
K+++L EAD++T DAQ+ LRR +EKY N + + C L +II LQSRC
Sbjct: 124 ESTSQRSFKVVVLCEADSLTRDAQHGLRRTMEKYANNCKIVLSCESLSRIIEPLQSRCII 183
Query: 602 FRF-APLKQD 628
AP +D
Sbjct: 184 INVPAPTDED 193
>Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical
protein C54G10.2 protein.
Length = 839
Score = 31.9 bits (69), Expect(2) = 2e-04
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 146 LPWVEKYRPKRLDDLVSHDDIIKTINQFMK 235
L WV+KY+PKR+ +LV + IN+ ++
Sbjct: 278 LSWVDKYKPKRMGELVGQNGDKSPINKLLE 307
Score = 30.3 bits (65), Expect(2) = 2e-04
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 16/116 (13%)
Frame = +2
Query: 257 LFYGPPGTGKTS-TILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTI- 430
L G PG GKT+ +AC QQ ++E+NASD R + +I + + I
Sbjct: 344 LLSGSPGVGKTTCAYMAC-------QQLGLQLVEMNASDVRSKKHLEAKIGELSGSHQIE 396
Query: 431 -----FKAGPK-------LIILDEADAMT-NDAQNALRRIIEKYTEN-VRFCIICN 556
K P+ ++I+DE D M+ N+ + + +I+ E+ + ICN
Sbjct: 397 QFFGAKKCAPQDNQKVHHILIMDEVDGMSGNEDRAGISELIQIIKESKIPIICICN 452
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 35.1 bits (77), Expect = 0.043
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L YGPPG GK T+LA A +F + L+++ D+ G Q L+ A
Sbjct: 117 ILLYGPPGCGK--TLLAKAVARAAGCRFIN--LQVSNLTDKWYG--ESQKLAAAVFSVAQ 170
Query: 434 KAGPKLIILDEADAMTNDAQN 496
K P +I +DE D+ D Q+
Sbjct: 171 KFQPTIIFIDEIDSFLRDRQS 191
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 35.1 bits (77), Expect = 0.043
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L YGPPG GK T+LA A +F + L+++ D+ G Q L+ A
Sbjct: 120 ILLYGPPGCGK--TLLAKAVARAAGCRFIN--LQVSNLTDKWYG--ESQKLAAAVFSVAQ 173
Query: 434 KAGPKLIILDEADAMTNDAQN 496
K P +I +DE D+ D Q+
Sbjct: 174 KFQPTIIFIDEIDSFLRDRQS 194
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 34.3 bits (75), Expect = 0.075
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 371 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 547
+RG+ + G+ A RTI K P+ I LDEA A+ + A+++ +EK ++ +
Sbjct: 682 ERGLKLSGGEKQRVAIARTILKK-PQFIFLDEATSALDTPTERAIQKCLEKLCKSRTGVV 740
Query: 548 ICNYLGKIIPA 580
+ + L ++ A
Sbjct: 741 VAHRLSTVVNA 751
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical
protein T21E8.1b protein.
Length = 1204
Score = 34.3 bits (75), Expect = 0.075
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 371 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 547
+RG + GQ A RT+ + PK+++LDEA A+ N+++ +++ +E ++ +
Sbjct: 456 ERGTQLSGGQKQRIAIARTLVR-NPKILLLDEATSALDNESEQVVQKALENASQGRTTIV 514
Query: 548 ICNYLGKI 571
+ + L I
Sbjct: 515 VAHRLSTI 522
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.1a protein.
Length = 1263
Score = 34.3 bits (75), Expect = 0.075
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 371 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 547
+RG + GQ A RT+ + PK+++LDEA A+ N+++ +++ +E ++ +
Sbjct: 515 ERGTQLSGGQKQRIAIARTLVR-NPKILLLDEATSALDNESEQVVQKALENASQGRTTIV 573
Query: 548 ICNYLGKI 571
+ + L I
Sbjct: 574 VAHRLSTI 581
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.2 protein.
Length = 1263
Score = 34.3 bits (75), Expect = 0.075
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 371 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 547
+RG + GQ A RT+ + PK+++LDEA A+ N+++ +++ +E ++ +
Sbjct: 515 ERGTQLSGGQKQRIAIARTLVR-NPKILLLDEATSALDNESEQVVQKALENASQGRTTIV 573
Query: 548 ICNYLGKI 571
+ + L I
Sbjct: 574 VAHRLSTI 581
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 34.3 bits (75), Expect = 0.075
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 371 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 547
+RG+ + G+ A RTI K P+ I LDEA A+ + A+++ +EK ++ +
Sbjct: 682 ERGLKLSGGEKQRVAIARTILKK-PQFIFLDEATSALDTPTERAIQKCLEKLCKSRTGVV 740
Query: 548 ICNYLGKIIPA 580
+ + L ++ A
Sbjct: 741 VAHRLSTVVNA 751
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 34.3 bits (75), Expect = 0.075
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 371 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 547
+RG+ + G+ A RTI K P+ I LDEA A+ + A+++ +EK ++ +
Sbjct: 682 ERGLKLSGGEKQRVAIARTILKK-PQFIFLDEATSALDTPTERAIQKCLEKLCKSRTGVV 740
Query: 548 ICNYLGKIIPA 580
+ + L ++ A
Sbjct: 741 VAHRLSTVVNA 751
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 34.3 bits (75), Expect = 0.075
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 371 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 547
+RG+ + G+ A RTI K P+ I LDEA A+ + A+++ +EK ++ +
Sbjct: 682 ERGLKLSGGEKQRVAIARTILKK-PQFIFLDEATSALDTPTERAIQKCLEKLCKSRTGVV 740
Query: 548 ICNYLGKIIPA 580
+ + L ++ A
Sbjct: 741 VAHRLSTVVNA 751
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 33.9 bits (74), Expect = 0.099
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRG-----IGIVRGQILSFAS 418
L F GPPG GKTS A A+ M Q S+ + SD RG + + G+I+
Sbjct: 332 LCFTGPPGIGKTSIAKAIAESMGRKFQRVSLGGIRDESDIRGHRRTYVAAMPGRIIEALK 391
Query: 419 TRTIFKAGPKLIILDEADAMTNDAQNA 499
T K + +LDE D + + Q +
Sbjct: 392 T---CKTNNPVFLLDEVDKLYSGNQGS 415
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACA 310
LFYGPPGTGK+S I A A
Sbjct: 201 LFYGPPGTGKSSFISALA 218
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACA 310
LFYGPPGTGK+S I A A
Sbjct: 247 LFYGPPGTGKSSFISALA 264
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 31.9 bits (69), Expect = 0.40
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 7/129 (5%)
Frame = +2
Query: 152 WVEKYRPKRLDDLVS-----HDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQ 316
W E +++DDL++ +++ N ++ LL GP G GK++ A+Q
Sbjct: 294 WDECVFHQKVDDLLASLGEKEREVLHMDNGKIRRPSSKMLLLSGPAGLGKSTLARIVARQ 353
Query: 317 MYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAG--PKLIILDEADAMTNDA 490
+++NASD R + + + T A P +ILDE D D
Sbjct: 354 A------GYSTIDVNASDARTVADLNKVLEGAVKTSRTLDADQRPACLILDEIDGTPIDT 407
Query: 491 QNALRRIIE 517
L R I+
Sbjct: 408 IRHLVRCIQ 416
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 107 YKNNMTVGETGQNLPWVEKYRPKRLDDLVSHDDIIKTINQFMK 235
Y+NN + E+ WV KY K DL+S + + I ++K
Sbjct: 253 YENNKSHPESSL---WVNKYEAKNFSDLLSDSTVNRNILTWLK 292
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 203 DIIKTINQFMKENQL-PHLLFYGPPGTGKT 289
DI T + + N L +++FYGPPGTGKT
Sbjct: 327 DIAITTSNTKRNNGLFRNVMFYGPPGTGKT 356
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 31.9 bits (69), Expect = 0.40
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRT 427
+L YGPPGTGKT A A Q + + ++++ D G +VR +FA +
Sbjct: 214 VLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGD--GAKLVRD---AFALAK- 267
Query: 428 IFKAGPKLIILDEADAM 478
+ P +I +DE DA+
Sbjct: 268 --EKAPAIIFIDELDAI 282
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQ 316
++FYGPPGTGKT A A +
Sbjct: 428 VVFYGPPGTGKTLVARALANE 448
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQ 316
++FYGPPGTGKT A A +
Sbjct: 426 VVFYGPPGTGKTLVARALANE 446
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQ 316
++FYGPPGTGKT A A +
Sbjct: 428 VVFYGPPGTGKTLVARALANE 448
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQ 316
++FYGPPGTGKT A A +
Sbjct: 428 VVFYGPPGTGKTLVARALANE 448
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQ 316
++FYGPPGTGKT A A +
Sbjct: 426 VVFYGPPGTGKTLVARALANE 446
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQ 316
++FYGPPGTGKT A A +
Sbjct: 428 VVFYGPPGTGKTLVARALANE 448
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQ 316
++FYGPPGTGKT A A +
Sbjct: 428 VVFYGPPGTGKTLVARALANE 448
>Z81521-2|CAB04224.1| 514|Caenorhabditis elegans Hypothetical
protein F32A11.2 protein.
Length = 514
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Frame = +2
Query: 170 PKRLDDLVSHDDIIKTINQFMKE------NQLPHLLFYGPPGTGKTSTI-LACAKQ 316
P+R D+L H+ I ++ ++K QL + GP G+GK++T+ + C +Q
Sbjct: 15 PRRRDELQIHNKKIAEVDHWLKNVFSESNKQLGVMYLTGPAGSGKSTTVEVMCTEQ 70
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = +2
Query: 134 TGQNLPWVEKYRPKRLDD--LVSHDDIIKTINQFMKENQLP-----H--LLFYGPPGTGK 286
+G PW+ K ++ + + D ++ TI+ E L H L+ GPPG+GK
Sbjct: 2484 SGDWQPWLSKVPTMEIESHRVAAADLVVPTIDTVRHEMLLAAWLAEHKPLVLCGPPGSGK 2543
Query: 287 TSTILACAK 313
T T+LA +
Sbjct: 2544 TMTLLAALR 2552
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -3
Query: 148 QILACFPNSHIVFITVFLNRF*YVSTDTLIKTIYLNCGL--VYKLEETIK 5
+++AC P + FI F++ F +D + I+LN GL + + EE +K
Sbjct: 3110 RVMACTPRHFLDFIKQFMSLFHEKRSDLEEEKIHLNIGLNKISETEEQVK 3159
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = +2
Query: 134 TGQNLPWVEKYRPKRLDD--LVSHDDIIKTINQFMKENQLP-----H--LLFYGPPGTGK 286
+G PW+ K ++ + + D ++ TI+ E L H L+ GPPG+GK
Sbjct: 2484 SGDWQPWLSKVPTMEIESHRVAAADLVVPTIDTVRHEMLLAAWLAEHKPLVLCGPPGSGK 2543
Query: 287 TSTILACAK 313
T T+LA +
Sbjct: 2544 TMTLLAALR 2552
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -3
Query: 148 QILACFPNSHIVFITVFLNRF*YVSTDTLIKTIYLNCGL--VYKLEETIK 5
+++AC P + FI F++ F +D + I+LN GL + + EE +K
Sbjct: 3110 RVMACTPRHFLDFIKQFMSLFHEKRSDLEEEKIHLNIGLNKISETEEQVK 3159
>AF076840-1|AAC95522.1| 514|Caenorhabditis elegans Rad17-like
protein protein.
Length = 514
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Frame = +2
Query: 170 PKRLDDLVSHDDIIKTINQFMKE------NQLPHLLFYGPPGTGKTSTI-LACAKQ 316
P+R D+L H+ I ++ ++K QL + GP G+GK++T+ + C +Q
Sbjct: 15 PRRRDELQIHNKKIAEVDHWLKNVFSESNKQLGVMYLTGPAGSGKSTTVEVMCTEQ 70
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 173 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 316
+ L +LV + ++ +++K P +LFYGPPG GKT A A +
Sbjct: 493 RELQELVQYP--VEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 540
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQ 316
+L +GPPGTGKT A A +
Sbjct: 247 ILLFGPPGTGKTLIARAVANE 267
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 173 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 316
+ L +LV + ++ +++K P +LFYGPPG GKT A A +
Sbjct: 492 RELQELVQYP--VEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 539
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQ 316
+L +GPPGTGKT A A +
Sbjct: 246 ILLFGPPGTGKTLIARAVANE 266
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 173 KRLDDLVSHDDIIKTINQFMKENQLPH--LLFYGPPGTGKTSTILACAKQ 316
+ L +LV + ++ +++K P +LFYGPPG GKT A A +
Sbjct: 492 RELQELVQYP--VEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 539
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQ 316
+L +GPPGTGKT A A +
Sbjct: 246 ILLFGPPGTGKTLIARAVANE 266
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 29.9 bits (64), Expect = 1.6
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQ---ILSFASTR 424
+L G PG GK+ST++A A+ P + LN SD + + G +L+ T
Sbjct: 1352 ILLEGAPGCGKSSTVMALAQLTGNP------ITRLNLSDQTDLSDLFGSDVPVLTEDGTM 1405
Query: 425 TI-FKAGPKLIILDEADAMTNDAQN-ALRRIIE 517
T ++ GP L + + + + D N A + ++E
Sbjct: 1406 TFRWEDGPVLKAIKKGEWILLDEMNLASQSVLE 1438
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical
protein C05A9.1 protein.
Length = 1283
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +2
Query: 371 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 547
+RG + GQ A RT+ + P++++LDEA A+ N+++ ++ ++K + +
Sbjct: 539 ERGAQLSGGQKQRIAIARTLVR-NPRILLLDEATSALDNESEFIVQEALQKASIGRTTIV 597
Query: 548 ICNYLGKI 571
+ + L I
Sbjct: 598 VAHRLSTI 605
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 29.5 bits (63), Expect = 2.1
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACA---KQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTR 424
+L +GPPG GKT A A KQM+ SS+ + ++ +RG F R
Sbjct: 214 ILLFGPPGNGKTLLAKAVAGESKQMFFNISASSLTSKWVGDSEK---TIRG---LFQIAR 267
Query: 425 TIFKAGPKLIILDEADAM 478
A P +I +DE D++
Sbjct: 268 ---NAQPSIIFIDEIDSI 282
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 29.5 bits (63), Expect = 2.1
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L YGPPG GK T+LA A T F +V S+ + G + R
Sbjct: 198 VLMYGPPGCGK--TMLAKAVAANTAASFIRVV----GSEFVQKYLGEGPRMVRDVFRLAK 251
Query: 434 KAGPKLIILDEADAMTN---DAQNALRRIIEK 520
+ P +I +DE DA+ DAQ R +++
Sbjct: 252 ENSPSIIFIDEIDAIATKRFDAQTGADREVQR 283
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 29.5 bits (63), Expect = 2.1
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +2
Query: 203 DIIKTINQFMKEN-QLPH-LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDR 376
D +K +F K +LP L GPPG GKT A A + P F SM
Sbjct: 302 DYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAESTVP--FISMNGSEFVEVIG 359
Query: 377 GIGIVRGQILSFASTRTIFKAGPKLIILDEADAM 478
G+G R + L F R+ P +I +DE DA+
Sbjct: 360 GLGASRIRGL-FKEARS---RAPCIIYIDEIDAI 389
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 29.5 bits (63), Expect = 2.1
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +2
Query: 203 DIIKTINQFMKEN-QLPH-LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDR 376
D +K +F K +LP L GPPG GKT A A + P F SM
Sbjct: 302 DYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAESTVP--FISMNGSEFVEVIG 359
Query: 377 GIGIVRGQILSFASTRTIFKAGPKLIILDEADAM 478
G+G R + L F R+ P +I +DE DA+
Sbjct: 360 GLGASRIRGL-FKEARS---RAPCIIYIDEIDAI 389
>Z70680-8|CAA94570.2| 349|Caenorhabditis elegans Hypothetical
protein C25G4.7 protein.
Length = 349
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 521 YTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQD 628
Y E + F NYLG+++ A + F FA L +D
Sbjct: 281 YVEKLLFMAHTNYLGRLLEACNATIISFHFADLCRD 316
>Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical
protein F10B5.5 protein.
Length = 424
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQM---YTPQQFSSMVLELNA 364
+L GPPGTGKTS A+ + + S++LE+N+
Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINS 214
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQM 319
L +GPPGTGKT A A Q+
Sbjct: 180 LLFGPPGTGKTLLARAVASQL 200
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQM 319
L +GPPGTGKT A A Q+
Sbjct: 188 LLFGPPGTGKTLLARAVASQL 208
>Z99281-28|CAB16503.1| 633|Caenorhabditis elegans Hypothetical
protein Y57G11C.1 protein.
Length = 633
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +2
Query: 203 DIIKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQ 331
++I IN ++ + L+ GP G GK ST+++ +Q YTPQ
Sbjct: 389 NVINGINLSIESGKTVALV--GPSGNGK-STLVSLIQQFYTPQ 428
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQ 316
+L YGPPGTGKT A A +
Sbjct: 214 VLLYGPPGTGKTLCARAVANR 234
>Z77666-2|CAB01233.2| 80|Caenorhabditis elegans Hypothetical
protein K08E7.2 protein.
Length = 80
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 173 KRLDDLVSH-DDIIKTINQFMKENQLPH 253
+R+DD+ + DD+ K IN ++ NQ+ H
Sbjct: 48 RRIDDMTTRIDDLEKNINDLLQSNQVEH 75
>Z54271-8|CAA91038.1| 185|Caenorhabditis elegans Hypothetical
protein F21D5.9 protein.
Length = 185
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 396 PLTMPMPLSSEALSSNTIELNCCGV 322
P TM PL + AL S+ + NCC V
Sbjct: 129 PSTMNNPLVANALGSSLVNENCCAV 153
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +2
Query: 254 LLFYGPPGTGKTS---TILACAKQMYTPQQFSSM--VLELNASDDRGIGIVRGQILSFAS 418
L F+GPPG GKTS +I + Y M V E+ +G + G+++
Sbjct: 508 LCFHGPPGVGKTSIAKSIATALNREYFRFSVGGMTDVAEIKGHRRTYVGAMPGKMIQCMK 567
Query: 419 TRTIFKAGPKLIILDEAD 472
K L+++DE D
Sbjct: 568 K---VKTENPLVLIDEVD 582
>AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical
protein Y39A1A.12 protein.
Length = 636
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 233 KENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFSSMV-LELNA 364
K + + G PGTGKT+T+ A M ++ V +E+NA
Sbjct: 288 KRGESSAMYISGVPGTGKTATVRAVVNSMKKSKKCQKFVYVEVNA 332
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACA 310
+L YGPPGTGKT A A
Sbjct: 191 VLLYGPPGTGKTLLARAVA 209
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACA 310
+L YGPPGTGKT A A
Sbjct: 212 VLLYGPPGTGKTLLARAVA 230
>U29613-3|AAC47062.2| 483|Caenorhabditis elegans Hypothetical
protein K02A6.3a protein.
Length = 483
Score = 27.9 bits (59), Expect = 6.5
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = +2
Query: 362 ASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQNALRRIIEKYTENVRF 541
A D G G GQIL T + G K + L + ++A + L ++EK+ E + +
Sbjct: 150 AGKDVGTG---GQILHSLKTVLNYLHGLKSLSLVDLQLTHDEADDFLSTLLEKFYEKLTY 206
Query: 542 CIICNYLGKIIPALQSRC 595
+ N P LQ C
Sbjct: 207 LSLLNVTLYPKPLLQVGC 224
>U29244-14|AAC71095.1| 774|Caenorhabditis elegans Fzo (fzo
mitochondrial fusion protein)related protein 1 protein.
Length = 774
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 182 DDLVSHDDIIKTI-NQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQ 331
+++ + D IKTI + F ++N ++F+G GK++TI A + PQ
Sbjct: 80 EEIEAIGDSIKTIMDTFQRDNM--KVVFFGRTSNGKSTTINAMLHEKVLPQ 128
>AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical
protein Y50E8A.16 protein.
Length = 807
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 266 GPPGTGKTSTILACAKQMYTPQ 331
GP G GK ST+++ +Q YTPQ
Sbjct: 584 GPSGNGK-STLVSLIQQFYTPQ 604
>AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb
(recombination protein) homologprotein 2 protein.
Length = 448
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMV 349
LL G PG GKT+ +A +K++ F S+V
Sbjct: 69 LLVTGEPGAGKTAIAIAISKELGEDTPFVSIV 100
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 27.9 bits (59), Expect = 6.5
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+L +GPPGTGKT I C Q + ++AS + G+ L A
Sbjct: 352 VLLFGPPGTGKT-MIGRC-----VASQCKATFFNISASSLTSKWVGEGEKLVRALFSVAR 405
Query: 434 KAGPKLIILDEADAM 478
P +I +DE D++
Sbjct: 406 LKLPSVIFIDEIDSL 420
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 27.9 bits (59), Expect = 6.5
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 266 GPPGTGKTSTILACAKQMYTP--QQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKA 439
GPPGTGKT A A + P S LE+ G+G R + + F+ R K
Sbjct: 333 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFV----GVGPARVRDM-FSMAR---KN 384
Query: 440 GPKLIILDEADAM 478
P ++ +DE DA+
Sbjct: 385 SPCILFIDEIDAV 397
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 27.5 bits (58), Expect = 8.6
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = +2
Query: 254 LLFYGPPGTGKTSTILACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
++ YG PGTGKT A A ++ + G +VR QI A
Sbjct: 220 VILYGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVR-QIFQMAK----- 273
Query: 434 KAGPKLIILDEADAM 478
+ P ++ +DE DA+
Sbjct: 274 EQAPSIVFIDEIDAV 288
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 27.5 bits (58), Expect = 8.6
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQ-QFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+ +GPPG GKT A A ++ P Q ++ L S + I R F + +
Sbjct: 243 IVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRR----LFDTAK--- 295
Query: 434 KAGPKLIILDEADAMTNDAQNALRRI 511
+ P ++ILD+ DA+ + A R +
Sbjct: 296 QNSPCILILDDIDAIAPRRETAQREM 321
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 27.5 bits (58), Expect = 8.6
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 LFYGPPGTGKTSTILACAKQMYTPQ-QFSSMVLELNASDDRGIGIVRGQILSFASTRTIF 433
+ +GPPG GKT A A ++ P Q ++ L S + I R F + +
Sbjct: 243 IVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRR----LFDTAK--- 295
Query: 434 KAGPKLIILDEADAMTNDAQNALRRI 511
+ P ++ILD+ DA+ + A R +
Sbjct: 296 QNSPCILILDDIDAIAPRRETAQREM 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,490,473
Number of Sequences: 27780
Number of extensions: 296541
Number of successful extensions: 1021
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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