Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16e20
(692 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC965.09 |||nitrilase |Schizosaccharomyces pombe|chr 3|||Manual 29 0.64
SPCC1919.01 |ppk34|SPCC830.12|serine/threonine protein kinase Pp... 29 0.64
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 28 1.1
SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pomb... 27 1.9
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 27 1.9
SPBC887.18c |||transcription adaptor protein |Schizosaccharomyce... 27 2.6
SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces pom... 27 2.6
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 26 4.5
SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces pombe... 26 5.9
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 26 5.9
SPAPB1A10.12c |alo1||D-arabinono-1,4-lactone oxidase|Schizosacch... 26 5.9
SPAC1071.01c |pta1|SPAC4H3.15c|mRNA cleavage and polyadenylation... 25 7.9
>SPCC965.09 |||nitrilase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 272
Score = 29.1 bits (62), Expect = 0.64
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 93 YLHKVFTMNTHLMIFVFISLLMSGIVCENKYTRSANEKNDDAKVDFRTLEKPFRMNKLNL 272
Y+H+V N + +F L+ SG C N +T+ A + F+T+ +N+
Sbjct: 27 YVHEVMESNPSTNLILFPELITSGYECGNTFTQIAEIAGEGP--SFKTMSNLAAKYHVNI 84
Query: 273 LW 278
++
Sbjct: 85 IY 86
>SPCC1919.01 |ppk34|SPCC830.12|serine/threonine protein kinase
Ppk34|Schizosaccharomyces pombe|chr 3|||Manual
Length = 354
Score = 29.1 bits (62), Expect = 0.64
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = +3
Query: 516 AMDDHINRSIFKDKKLNMLWSKAEFSGFTAEELSALKEEFLHHQEKIDQYYELLGELD 689
A+ + S+ + +K ++ + E F + S ++++ + +QEK D YY + ELD
Sbjct: 67 AIKEFKKTSLRRREKFRLMQLEKELGSFNDMDSSTIEDQ-IRNQEKKDPYYYIRKELD 123
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/64 (21%), Positives = 27/64 (42%)
Frame = +3
Query: 195 ANEKNDDAKVDFRTLEKPFRMNKLNLLWTKAQQRLTEPKLKSLYSDLMLHDKEEITYKRF 374
+ +K K T + +NK +WT+ +T+ + S Y L ++ + K F
Sbjct: 245 SEKKEKKTKKVKETTTETEELNKTKPIWTRNPSEVTKEEYASFYKSLTNDWEDHLAVKHF 304
Query: 375 KSDG 386
+G
Sbjct: 305 SVEG 308
>SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1647
Score = 27.5 bits (58), Expect = 1.9
Identities = 28/110 (25%), Positives = 47/110 (42%)
Frame = +3
Query: 315 KSLYSDLMLHDKEEITYKRFKSDGGDKEGLKEAELRRKLSNIMSVYGLLEHFDPKADRQK 494
KS Y +HD K + D E ++E L L +I++V+ +H +
Sbjct: 1371 KSTYFMEGIHDVIVGLLKGIQCQQSD-ESIRE-NLYGSLLSILTVFQ--KHTSANGGDKV 1426
Query: 495 DHPAFNSAMDDHINRSIFKDKKLNMLWSKAEFSGFTAEELSALKEEFLHH 644
D P F A I ++ + ++L A ++ + ELS + FLHH
Sbjct: 1427 D-PVFKDAFQKLITPNLLTSQFFDVLTKDALYTNGSCWELSVIILNFLHH 1475
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 27.5 bits (58), Expect = 1.9
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 279 TKAQQRLTEPKLKSLYSDLMLHDKEEITYKRFKSDGGDKEGLKEAELRRKLSNI 440
TK + + K L++ L L E K+ +SD +G K + +KLS++
Sbjct: 637 TKLKSTCAKASRKRLFNQLELSPPESFMEKKARSDENQLDGNKIKDDNQKLSSV 690
>SPBC887.18c |||transcription adaptor protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 339
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = +3
Query: 177 NKYTRSANEKNDDAKVDFRTLEKPFRMNKLNLLWTKAQQRLTEPKLKSLYSDLMLHD 347
NK R N +ND A F +N LNL WT E + L +LHD
Sbjct: 253 NKNIRQKNTENDAAG---------FTINDLNLAWTIEPHAFVEQYPQKLRMPFLLHD 300
>SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +3
Query: 87 IKYLHKVFTMNTHLMIFVFISLLMSGIVCENKYTRSANEKNDDAKVDFRTLEKPFRMNKL 266
++ L K+ + ++ + + LLM+ +VC Y R +++ +A V + L+ F + KL
Sbjct: 378 LEILTKLLEIYSYRISAHHVELLMALVVCSRNYMRCNLQEHHNAIV--QALQNLFTLIKL 435
Query: 267 NL 272
N+
Sbjct: 436 NI 437
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 600 TAEELSALKEEFLHHQEKIDQYYELL 677
TAEEL EF +++++DQ+Y ++
Sbjct: 1440 TAEELERKFREFCSNKDELDQFYGIV 1465
>SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 882
Score = 25.8 bits (54), Expect = 5.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +3
Query: 309 KLKSLYSDLMLHDKEEITYKRFKSDGGDKEGLKEAELRRKLSNIMSVYGLLEHFDPKADR 488
KLK++ + D++ + R K DKE L+ +L + S I V +H +
Sbjct: 507 KLKTMKDGKAVVDEKAVLSDRSKKIKVDKEALESYKLNSEQSGIYRVNYSADHLKKLSQI 566
Query: 489 QKDHPAFNSAMD 524
+ P + S D
Sbjct: 567 AVEKPDYLSVED 578
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 25.8 bits (54), Expect = 5.9
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Frame = +3
Query: 252 RMNKLNLLWTKAQQRLTE-PKLKSLYSDLMLHDKEEITYKRFKSDGGDKEGLKEAELRRK 428
++ KLN L K Q +E KL++ DL + + R + + K+ E L +
Sbjct: 678 QIQKLNSLQLKLQVVTSEYEKLETQLKDLKT---QNANFHRLEQEIQLKQ--HELTLLIE 732
Query: 429 LSNIMSVYGLLEHFDPKADRQKDHPAFNSAMDDHINRSIFKDKKLNMLWSKAEFSGFTAE 608
S + LL + D KD +D I +S KK+ E+
Sbjct: 733 QRETDSSFRLLSDYQQYKDDVKDLKQRLPELDRLILQSDQAIKKIER--DMQEWKHNKGS 790
Query: 609 ELSALKEEFLHHQEKIDQYYELLGELDN 692
+++ L++EF ++ K+D++ +L + +N
Sbjct: 791 KMAELEKEFNQYKHKLDEFTPILEKSEN 818
>SPAPB1A10.12c |alo1||D-arabinono-1,4-lactone
oxidase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 501 PAFNSAMDDHINR--SIFKDKKLNMLWSKAEF 590
PAF+ + + +F+D K N++W AEF
Sbjct: 193 PAFDLVATEDVTTVTDLFQDWKNNLIWESAEF 224
>SPAC1071.01c |pta1|SPAC4H3.15c|mRNA cleavage and polyadenylation
specificity factor complex subunit
Pta1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.4 bits (53), Expect = 7.9
Identities = 21/93 (22%), Positives = 44/93 (47%)
Frame = +3
Query: 201 EKNDDAKVDFRTLEKPFRMNKLNLLWTKAQQRLTEPKLKSLYSDLMLHDKEEITYKRFKS 380
E ++++K+ R +EK ++ L+L + + K+ + S + H K + + K+ +
Sbjct: 249 ELSNESKLAIRCIEKNLKLILLHLAKSTGASSSSVEKIHAYLSGQIYHTKVDESLKKRQY 308
Query: 381 DGGDKEGLKEAELRRKLSNIMSVYGLLEHFDPK 479
+G + A R K S + S L+E P+
Sbjct: 309 EG----NISAASKRVKSSAVQS---LVERMQPQ 334
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,499,535
Number of Sequences: 5004
Number of extensions: 46825
Number of successful extensions: 141
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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