Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16e10
         (666 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...   142   4e-36
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          50   2e-08
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      50   2e-08
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          47   2e-07
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      47   2e-07
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    44   1e-06
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          36   3e-04
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      36   3e-04
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         24   1.5  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    24   1.5  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    24   1.5  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    23   2.6  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    23   2.6  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    23   2.6  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    23   2.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.5  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    22   4.6  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    22   4.6  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score =  142 bits (343), Expect = 4e-36
 Identities = 70/171 (40%), Positives = 103/171 (60%)
 Frame = +3

Query: 90  MADVFESLELLFDRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKI 269
           MA     +  LFDRP+EP+  PKG+N   F +   +L + Y +   ++ NRFGDD   K+
Sbjct: 1   MASDKSGILYLFDRPSEPVYVPKGDNKVAFDIPPDYLPDRYRSVATQVFNRFGDDTESKL 60

Query: 270 PLKNLSKLPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFAR 449
           P+K ++ LP+  I  QL +   FSLF+P H+++A  L+ + M +   E  D LS   + R
Sbjct: 61  PVKAIT-LPDLSIPMQLGRRQPFSLFIPAHRKIAARLIDIFMGMRTYE--DFLSVAVYCR 117

Query: 450 VNLNPQLFNYCYSVALMHRRDTRKVRVKNFAEVFPSKFLDSQVFTQARETA 602
             LNP LF Y  SVA++HR DT+ + V    EVFP K++DS +F++ARE A
Sbjct: 118 DRLNPNLFIYALSVAILHRPDTKDLPVPPLTEVFPDKYMDSGIFSRAREEA 168


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 50.0 bits (114), Expect = 2e-08
 Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
 Frame = +3

Query: 339 SLFLPKHQEMANELLGVLMDVPEN--ELQDLLSTCAFARVNLNPQLFNYCYSVALMHRRD 512
           ++F P + E   E+  +L ++  N  + Q    T A+AR+ +N  +F   +S+A+++R D
Sbjct: 95  AIFTPLNSEQKYEVR-MLFELLYNAKDFQTFYKTAAWARLRMNSGMFTTAFSIAVLYRPD 153

Query: 513 TRKVRVKNFAEVFPSKFLDSQVFTQAR 593
           T+ ++     E++P+ F DS V  +A+
Sbjct: 154 TKYMKFPAIYEIYPNYFFDSSVIEEAQ 180


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 50.0 bits (114), Expect = 2e-08
 Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
 Frame = +3

Query: 339 SLFLPKHQEMANELLGVLMDVPEN--ELQDLLSTCAFARVNLNPQLFNYCYSVALMHRRD 512
           ++F P + E   E+  +L ++  N  + Q    T A+AR+ +N  +F   +S+A+++R D
Sbjct: 95  AIFTPLNSEQKYEVR-MLFELLYNAKDFQTFYKTAAWARLRMNSGMFTTAFSIAVLYRPD 153

Query: 513 TRKVRVKNFAEVFPSKFLDSQVFTQAR 593
           T+ ++     E++P+ F DS V  +A+
Sbjct: 154 TKYMKFPAIYEIYPNYFFDSSVIEEAQ 180


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 26/95 (27%), Positives = 49/95 (51%)
 Frame = +3

Query: 318 LPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFARVNLNPQLFNYCYSVAL 497
           LP+   F++   + +  A  L  +L      ++    +T  +AR N+N Q++ Y  SVA+
Sbjct: 89  LPRGQVFTMMNKEMRHQAVVLFRLLYSAKTFDV--FYNTAVWARFNVNEQMYLYALSVAV 146

Query: 498 MHRRDTRKVRVKNFAEVFPSKFLDSQVFTQARETA 602
           +HR DT+ +++    EV P  + + +V  +A   A
Sbjct: 147 IHRPDTKLMKLPPMYEVMPHLYFNDEVMQKAYNIA 181


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 26/95 (27%), Positives = 49/95 (51%)
 Frame = +3

Query: 318 LPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFARVNLNPQLFNYCYSVAL 497
           LP+   F++   + +  A  L  +L      ++    +T  +AR N+N Q++ Y  SVA+
Sbjct: 89  LPRGQVFTMMNKEMRHQAVVLFRLLYSAKTFDV--FYNTAVWARFNVNEQMYLYALSVAV 146

Query: 498 MHRRDTRKVRVKNFAEVFPSKFLDSQVFTQARETA 602
           +HR DT+ +++    EV P  + + +V  +A   A
Sbjct: 147 IHRPDTKLMKLPPMYEVMPHLYFNDEVMQKAYNIA 181


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 44.0 bits (99), Expect = 1e-06
 Identities = 27/94 (28%), Positives = 48/94 (51%)
 Frame = +3

Query: 321 PKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFARVNLNPQLFNYCYSVALM 500
           P+   FS  + + ++  + L  +L+     + Q  L T A+ARV++N   F   +  A++
Sbjct: 88  PQGTTFSNSISQLRKEVSLLYRILLGA--KDYQTFLKTAAWARVHVNEGQFLKAFVAAVL 145

Query: 501 HRRDTRKVRVKNFAEVFPSKFLDSQVFTQARETA 602
            R+DT+ V      E+ P   LDS+V  +A+  A
Sbjct: 146 TRQDTQSVIFPPVYEILPQHHLDSRVIQEAQNIA 179


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 35.9 bits (79), Expect = 3e-04
 Identities = 22/91 (24%), Positives = 44/91 (48%)
 Frame = +3

Query: 318 LPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFARVNLNPQLFNYCYSVAL 497
           LP+   FSL+ P+     + L  +     + ++     T  +A+ N+N   + Y    A+
Sbjct: 91  LPRGELFSLYYPQLLREMSALFKLFYHAKDFDI--FFKTALWAKNNINEAQYIYSLYTAV 148

Query: 498 MHRRDTRKVRVKNFAEVFPSKFLDSQVFTQA 590
           + R DT+ +++    E+ P  F +S+V  +A
Sbjct: 149 ITRPDTKFIQLPPLYEMCPYFFFNSEVLQKA 179


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 35.9 bits (79), Expect = 3e-04
 Identities = 22/91 (24%), Positives = 44/91 (48%)
 Frame = +3

Query: 318 LPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFARVNLNPQLFNYCYSVAL 497
           LP+   FSL+ P+     + L  +     + ++     T  +A+ N+N   + Y    A+
Sbjct: 91  LPRGELFSLYYPQLLREMSALFKLFYHAKDFDI--FFKTALWAKNNINEAQYIYSLYTAV 148

Query: 498 MHRRDTRKVRVKNFAEVFPSKFLDSQVFTQA 590
           + R DT+ +++    E+ P  F +S+V  +A
Sbjct: 149 ITRPDTKFIQLPPLYEMCPYFFFNSEVLQKA 179


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
 Frame = +3

Query: 135 NEPLITPKGENNSVFQLTEQFLTEDYANNGIE---LNNRFGDDASEKIPLKN 281
           N    +P    +  +  TEQF T DY  N I    + N     +S K+  K+
Sbjct: 263 NNLYYSPVASTSLYYVNTEQFRTSDYQQNDIHYEGVQNILDTQSSAKVVSKS 314


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
 Frame = +3

Query: 135 NEPLITPKGENNSVFQLTEQFLTEDYANNGIE---LNNRFGDDASEKIPLKN 281
           N    +P    +  +  TEQF T DY  N I    + N     +S K+  K+
Sbjct: 263 NNLYYSPVASTSLYYVNTEQFRTSDYQQNDIHYEGVQNILDTQSSAKVVSKS 314


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
 Frame = +3

Query: 135 NEPLITPKGENNSVFQLTEQFLTEDYANNGIE---LNNRFGDDASEKIPLKN 281
           N    +P    +  +  TEQF T DY  N I    + N     +S K+  K+
Sbjct: 263 NNLYYSPVASTSLYYVNTEQFRTSDYQQNDIHYEGVQNILDTQSSAKVVSKS 314


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/50 (24%), Positives = 21/50 (42%)
 Frame = +3

Query: 126 DRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPL 275
           +R  EP I     NN  +     +   +Y NN  +    +  +  E+IP+
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPI 123


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/50 (24%), Positives = 21/50 (42%)
 Frame = +3

Query: 126 DRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPL 275
           +R  EP I     NN  +     +   +Y NN  +    +  +  E+IP+
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPI 123


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/50 (24%), Positives = 21/50 (42%)
 Frame = +3

Query: 126 DRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPL 275
           +R  EP I     NN  +     +   +Y NN  +    +  +  E+IP+
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPI 123


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/50 (24%), Positives = 21/50 (42%)
 Frame = +3

Query: 126 DRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPL 275
           +R  EP I     NN  +     +   +Y NN  +    +  +  E+IP+
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPI 123


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 605  RYSTRCSTHTYYHSTRLHC 661
            R  T  ST  Y+H+   HC
Sbjct: 1669 RLDTEMSTWGYHHNVNKHC 1687


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = +3

Query: 249 DDASEKIPLKNLSKLPEFKIATQLPKDAEFSLFLPKHQEMANEL 380
           ++    + + N   LP+FK+     +  E SL    +  +A E+
Sbjct: 171 NEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEI 214


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = +3

Query: 249 DDASEKIPLKNLSKLPEFKIATQLPKDAEFSLFLPKHQEMANEL 380
           ++    + + N   LP+FK+     +  E SL    +  +A E+
Sbjct: 110 NEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEI 153


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,315
Number of Sequences: 438
Number of extensions: 4184
Number of successful extensions: 22
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)