Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16e09
         (455 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   1.8  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   4.1  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    20   9.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   9.5  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 169 RPVFSGIQKHIIATGGWVSILSYVQHKRNEYLA 267
           + VFS     +IAT  +   ++ VQ   NE+ A
Sbjct: 128 KEVFSRFSNDVIATAAFGIRVNSVQEPNNEFYA 160


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 402 NNSIFNLHLTNWDPRFKQVTNLLTFGNREIIWV*FY 295
           +NS+++LHL  W      VT +L  G+  I+   F+
Sbjct: 247 HNSLYSLHLLLW----ITVTFILLVGDSYIVMYVFF 278


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 61  LGDEGRQKPFLNKYWPEIIGVTFGI 135
           + D+ R+   L      I+G TFG+
Sbjct: 201 MNDDDRKDDLLGNNMHHILGNTFGL 225


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 439 LKTIYFTFFNISQ 401
           L  I+FT FN++Q
Sbjct: 168 LSGIFFTVFNVAQ 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,808
Number of Sequences: 336
Number of extensions: 2563
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)