Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16e02
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    27   0.17 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    27   0.17 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   1.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   1.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   1.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.1  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 556 KLNNRLQIHVNSTIVFIWITITLSVSNFR 470
           K  N LQI++    +F ++T T + SNFR
Sbjct: 9   KFLNSLQIYLQHNQIFGFVTFTCTRSNFR 37


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 556 KLNNRLQIHVNSTIVFIWITITLSVSNFR 470
           K  N LQI++    +F ++T T + SNFR
Sbjct: 27  KFLNSLQIYLQHNQIFGFVTFTCTRSNFR 55


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 5/29 (17%)
 Frame = -3

Query: 336 DGEETQDRQIYD-----HVTGQCKVTCTP 265
           D EET DRQIY      HV G    T  P
Sbjct: 201 DDEETGDRQIYPWMRKVHVAGASNGTFAP 229


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 5/29 (17%)
 Frame = -3

Query: 336 DGEETQDRQIYD-----HVTGQCKVTCTP 265
           D EET DRQIY      HV G    T  P
Sbjct: 201 DDEETGDRQIYPWMRKVHVAGASNGTFAP 229


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 5/29 (17%)
 Frame = -3

Query: 336 DGEETQDRQIYD-----HVTGQCKVTCTP 265
           D EET DRQIY      HV G    T  P
Sbjct: 201 DDEETGDRQIYPWMRKVHVAGASNGTFAP 229


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/46 (19%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -2

Query: 529 VNSTIVFIWITITLSVSNFRLK*ETYEKKKTPNYLTLQIRSI-VPF 395
           +N+T + +W   T+ +  F +   +++  K  ++L +   ++ +PF
Sbjct: 11  INTTKLLLWCDQTIGLITFDINTPSFKLSKIRSFLNITASAVLLPF 56


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 199 CQRHQTFYSSHC 164
           CQ H T Y+ HC
Sbjct: 76  CQDHTTHYTCHC 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,415
Number of Sequences: 336
Number of extensions: 2855
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)