Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16e02
         (632 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0334 + 16859581-16859701,16859729-16860003,16862355-16863839     33   0.19 
07_03_0911 + 22537352-22537456,22537877-22538028,22538277-225383...    28   7.1  
07_01_0239 + 1744353-1746365                                           27   9.4  

>10_08_0334 + 16859581-16859701,16859729-16860003,16862355-16863839
          Length = 626

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +1

Query: 160 KHNGWNK-RFGVVGIRGFNWNDICHTSLCLTTIQIFWGACYLTLAGNVIVYLT 315
           K  GW    F VV + G    D+C   + +   ++F    Y  +A N+++YLT
Sbjct: 29  KRGGWKACSFIVVVVAGELGGDVCVVVVVVAVYELFERMAYYGIASNLVIYLT 81


>07_03_0911 +
           22537352-22537456,22537877-22538028,22538277-22538350,
           22538379-22538560,22539114-22539192,22539283-22539407,
           22539575-22539656,22539870-22539931,22540362-22540778
          Length = 425

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -3

Query: 585 DFIIWLLTIQSSTIDYKYTSIQQSYLFGLQLHYQYQTSD 469
           D   WL   QS + D +   I +S +FG Q  Y+   +D
Sbjct: 205 DDFSWLREFQSESSDSRTADISESQIFGAQRGYEKGETD 243


>07_01_0239 + 1744353-1746365
          Length = 670

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 369 PHRIIGVVHVKDGEETQDRQIYDHVTGQCKVTCTP 265
           P+ I+  + +K GEE Q    YDH   Q  VT  P
Sbjct: 161 PYSILHPLRLKSGEEMQVWIDYDHRRMQLNVTLAP 195


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,108,407
Number of Sequences: 37544
Number of extensions: 262756
Number of successful extensions: 513
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)