Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16e02
         (632 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    23   1.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   7.5  
AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.          21   7.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   9.9  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   9.9  

>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 554 AQQSITNTRQFNNRIYLDYNY 492
           + ++I N   +NN  Y +YNY
Sbjct: 86  SNKTIHNNNNYNNNNYNNYNY 106


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 182 GLVSLAFAGSIGMTFVILACALPQYKFF 265
           G+V +A   S  +  V  AC  P+Y+++
Sbjct: 245 GVVHVAQDESTSLVCVAQACPTPEYRWY 272


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 182 GLVSLAFAGSIGMTFVILACALPQYKFF 265
           G+V +A   S  +  V  AC  P+Y+++
Sbjct: 245 GVVHVAQDESTSLVCVAQACPTPEYRWY 272


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 280 LTLAGNVIVYLTILGFFTIFDMDDSD 357
           LTL+GN I  +  L F    D+ + D
Sbjct: 412 LTLSGNAIASIDPLAFRNCSDLKELD 437


>AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.
          Length = 88

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 263 KICIVVRHKL 234
           K+CIVVR KL
Sbjct: 55  KVCIVVRRKL 64


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -1

Query: 509 YLDYNYTI 486
           +LDYNYTI
Sbjct: 371 FLDYNYTI 378


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -1

Query: 509 YLDYNYTI 486
           +LDYNYTI
Sbjct: 371 FLDYNYTI 378


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,619
Number of Sequences: 438
Number of extensions: 3708
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)