Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16d18
(665 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces ... 143 2e-35
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 106 2e-24
SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme ... 70 3e-13
SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces ... 56 5e-09
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 53 4e-08
SPAC2G11.10c |||URM1 activating enzyme |Schizosaccharomyces pomb... 53 4e-08
SPAC4C5.04 |rad31|uba4|SUMO E1-like activator enzyme Rad31|Schiz... 44 1e-05
SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces ... 39 6e-04
SPCC584.13 |||amino acid permease, unknown 14|Schizosaccharomyce... 30 0.26
SPCC1450.14c |ero12||ER oxidoreductin Ero1b|Schizosaccharomyces ... 28 1.4
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 26 4.2
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 26 5.6
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 26 5.6
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 25 7.4
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 7.4
SPBP23A10.07 |rpa2||DNA-directed RNA polymerase I complex subuni... 25 9.8
>SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 444
Score = 143 bits (347), Expect = 2e-35
Identities = 67/143 (46%), Positives = 95/143 (66%)
Frame = +3
Query: 225 LERSGPFCHPDFEASAEILNFIMNCCKVLIVGAGGLGCELLKDLALMGFKKLHIVDMDTI 404
L++ GPF E E L + K+LI+GAGGLGCE+LKDLAL GF+ L ++DMDTI
Sbjct: 21 LKKPGPFNLDAPENPEETLKSAFSS-KILIIGAGGLGCEILKDLALSGFRDLSVIDMDTI 79
Query: 405 ELSNLNRQFLFRRNDIGLPKAKCAVEFVNKRVPGCEAVAHHCAIQDLDEDFYRQFHIVVC 584
+++NLNRQFLF ++I PKA A + KR+P + IQD +FY++F +++C
Sbjct: 80 DITNLNRQFLFNESNIDEPKANVAASMIMKRIPSTVVTPFYGKIQDKTIEFYKEFKLIIC 139
Query: 585 GLDSIIARRWLNGMLVSLLQYND 653
GLDS+ ARRW+N LV++ + D
Sbjct: 140 GLDSVEARRWINSTLVAIAKTGD 162
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 106 bits (255), Expect = 2e-24
Identities = 52/108 (48%), Positives = 76/108 (70%), Gaps = 2/108 (1%)
Frame = +3
Query: 303 KVLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVE 482
KVL+VGAGG+GCELLK+L + G K++HI+D+DTI+LSNLNRQFLFR+ + PKA A +
Sbjct: 27 KVLLVGAGGIGCELLKNLLMSGVKEVHIIDLDTIDLSNLNRQFLFRKKHVKQPKAIVAAK 86
Query: 483 FVNKRVPGCEAVAHHCAIQD--LDEDFYRQFHIVVCGLDSIIARRWLN 620
+ P + A+H I++ + ++RQF +V LD++ ARR +N
Sbjct: 87 TASSFNPNVKLEAYHANIKEDRFNVAWFRQFDLVFNALDNLDARRHVN 134
>SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1012
Score = 70.1 bits (164), Expect = 3e-13
Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 12/115 (10%)
Frame = +3
Query: 312 IVGAGGLGCELLKDLALMGFKK-----LHIVDMDTIELSNLNRQFLFRRNDIGLPKAKC- 473
+VGAG +GCE+LK+ A+MG + + DMD+IE SNLNRQFLFR D+G K++C
Sbjct: 432 LVGAGAIGCEMLKNWAMMGVATGESGHISVTDMDSIEKSNLNRQFLFRPRDVGKLKSECA 491
Query: 474 --AVEFVNKRVPG-CEAVAHHCAIQD---LDEDFYRQFHIVVCGLDSIIARRWLN 620
AV +N + G + + ++F+ + +V LD++ AR +++
Sbjct: 492 STAVSIMNPSLTGKITSYQERVGPESEGIFGDEFFEKLSLVTNALDNVEARMYVD 546
Score = 51.6 bits (118), Expect = 1e-07
Identities = 29/110 (26%), Positives = 53/110 (48%)
Frame = +3
Query: 291 MNCCKVLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAK 470
M+ VLI+G GLG E+ K++ L G K + + D + +L+ Q+ +DIG+P+AK
Sbjct: 35 MSQSNVLIIGCKGLGVEIAKNVCLAGVKSVTLYDPQPTRIEDLSSQYFLTEDDIGVPRAK 94
Query: 471 CAVEFVNKRVPGCEAVAHHCAIQDLDEDFYRQFHIVVCGLDSIIARRWLN 620
V ++ + +L ++ + F VV S+ + +N
Sbjct: 95 VTV----SKLAELNQYVPVSVVDELSTEYLKNFKCVVVTETSLTKQLEIN 140
>SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 485
Score = 56.0 bits (129), Expect = 5e-09
Identities = 27/74 (36%), Positives = 41/74 (55%)
Frame = +3
Query: 306 VLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVEF 485
V++VG GG+G ++ LA G +K+ IVD D + LS+LNR + D+G PK +
Sbjct: 129 VIVVGCGGVGSWVINMLARSGVQKIRIVDFDQVSLSSLNRHSIATLQDVGTPKTLAIKKA 188
Query: 486 VNKRVPGCEAVAHH 527
+ K P E A +
Sbjct: 189 IKKFAPWIEVDARN 202
>SPBC6B1.05c |||ubiquitin-like conjugating
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 649
Score = 52.8 bits (121), Expect = 4e-08
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +3
Query: 303 KVLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDI--GLPKAKCA 476
K L++GAG LGC + ++L G + + VD T+ SN RQ LF D LPKA+CA
Sbjct: 337 KCLLLGAGTLGCGVARNLLSWGVRHVTFVDYSTVSYSNPVRQSLFTFEDCKRKLPKAECA 396
Query: 477 VEFVNKRVPGCEAVAHHCAIQDLDEDFY 560
+ + + P + ++ +I L Y
Sbjct: 397 AQRLKEIYPNMFSTGYNISIPMLGHPIY 424
>SPAC2G11.10c |||URM1 activating enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 401
Score = 52.8 bits (121), Expect = 4e-08
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +3
Query: 306 VLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVEF 485
VL++GAGGLGC ++ L G L I+D D ++ SNL+RQ + + G+ KA A +F
Sbjct: 46 VLVIGAGGLGCPAMQYLVAAGIGTLGIMDGDVVDKSNLHRQIIHSTSKQGMHKAISAKQF 105
Query: 486 VNKRVP 503
+ P
Sbjct: 106 LEDLNP 111
>SPAC4C5.04 |rad31|uba4|SUMO E1-like activator enzyme
Rad31|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 44.4 bits (100), Expect = 1e-05
Identities = 26/93 (27%), Positives = 47/93 (50%)
Frame = +3
Query: 303 KVLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVE 482
+VL++ A L E+ K+L L G KL ++D T+ ++ QF +DIG +A +
Sbjct: 33 RVLLITASPLANEIAKNLVLSGIGKLCVLDSMTVYEKDVEEQFFIEASDIGQLRANVFKK 92
Query: 483 FVNKRVPGCEAVAHHCAIQDLDEDFYRQFHIVV 581
+++ P E I ++DE +F +V+
Sbjct: 93 KLHELNPLVEIDTDTSLISEIDEGKISKFSMVI 125
>SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 500
Score = 39.1 bits (87), Expect = 6e-04
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Frame = +3
Query: 306 VLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVEF 485
V ++ A +GCE LK+L L G +VD +++ S F + + G +A+C
Sbjct: 30 VCLLYANTVGCEALKNLILPGIGSFAVVDDTSVDFSMDGMNFFIQYDQEGKSRARCTASL 89
Query: 486 VNKRVPGCEAVAHHC---AIQDLDEDFYRQFHIVV 581
+ + P E A+ D + +++ +F +V+
Sbjct: 90 LQQLNPNVEMEYLEMSPEALIDKNIEYFSKFSVVL 124
>SPCC584.13 |||amino acid permease, unknown 14|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 544
Score = 30.3 bits (65), Expect = 0.26
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = -2
Query: 499 TLLLTNSTAHLALGRPISFLLNKNCRFKFDSSIVSISTICNFL 371
T++ N+ + LG+P L + C +K ++ S++ IC+F+
Sbjct: 302 TIVDVNAAMNDDLGQPFVVYLRQVCNYKTTVALTSLTVICSFM 344
>SPCC1450.14c |ero12||ER oxidoreductin Ero1b|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 571
Score = 27.9 bits (59), Expect = 1.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 442 LLNKNCRFKFDSSIVSISTICNFL 371
L NK CR+ D ++ S+ CN L
Sbjct: 87 LFNKECRYNLDDNVACGSSACNVL 110
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -3
Query: 273 LLKLQNLDGRKDQIFPAAS 217
LLK NLDG KD FP+ S
Sbjct: 492 LLKTVNLDGNKDFTFPSNS 510
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 5.6
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -2
Query: 478 TAHLALGRPISFLLNKNCRFKFDSSIVSISTI-CNFLKPIKAKSFNNSQPRPPAPTMRTL 302
+A A G+P + + R+ SS+ ++ KP+ KS N Q APT +L
Sbjct: 490 SASNASGKPRTSVNRLVDRYNHTSSLNKVAAAPAPVPKPVNLKSVENPQNNISAPTPSSL 549
Query: 301 QQFMMKFRISAEASKS 254
Q + SKS
Sbjct: 550 QSSNAPVGLGEVESKS 565
>SPBC839.06 |cta3||P-type ATPase, calcium transporting
Cta3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1037
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -2
Query: 421 FKFDSSIVSISTICNFLKPIKAKSFNNS 338
FK S++ ++ T C + ++ K+F+NS
Sbjct: 886 FKARSAVFAVVTFCILIMAVEVKNFDNS 913
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 597 LSQAHKQQCEIVYKNLHQGPEWH 529
+S+ HKQ C +VY + P H
Sbjct: 282 ISEIHKQPCHVVYTDYRPTPLQH 304
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -1
Query: 113 RHRAYNLVDEHMSHRLLR-VTENN 45
+HR NLV+ H H L R ++ENN
Sbjct: 1382 QHRRLNLVNNHKEHVLERAMSENN 1405
>SPBP23A10.07 |rpa2||DNA-directed RNA polymerase I complex subunit
Rpa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1227
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = -2
Query: 133 KSQLKAKGIVPII*SMNICHIDYCESLKITIASKSQCNE 17
+S+++ G++PI+ N CH++ ++ IA K + E
Sbjct: 184 QSEMREVGMIPIMVRSNRCHLEGLSPAEL-IAHKEESEE 221
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,686,619
Number of Sequences: 5004
Number of extensions: 54829
Number of successful extensions: 171
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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