Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16d18
(665 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1178 + 9385261-9385374,9385457-9385620,9386251-9386453,938... 169 2e-42
07_03_1076 + 23779941-23779988,23780102-23780191,23781580-237816... 120 1e-27
12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-31... 72 4e-13
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 72 5e-13
03_02_0665 - 10268959-10269148,10269344-10269936,10270572-102710... 65 4e-11
07_03_1774 + 29425486-29425831,29426018-29426235,29426337-294271... 64 7e-11
06_01_1006 + 7836366-7836460,7836568-7836626,7836877-7836961,783... 55 4e-08
02_05_1131 - 34328168-34328557,34328838-34328957,34329067-343291... 50 2e-06
02_04_0046 + 19211961-19212231,19212651-19212706,19212947-192130... 41 0.001
01_05_0699 - 24376987-24377154,24377259-24377406,24377530-243776... 37 0.017
12_01_0624 - 5137096-5137310,5137923-5138380,5138428-5140070,514... 29 3.3
>01_01_1178 +
9385261-9385374,9385457-9385620,9386251-9386453,
9387130-9387362,9387584-9387640,9388120-9388241,
9388366-9388425,9388426-9388543,9389005-9389286
Length = 450
Score = 169 bits (411), Expect = 2e-42
Identities = 80/165 (48%), Positives = 109/165 (66%)
Frame = +3
Query: 162 MTSESQTADYQNRRWQHIRKLLERSGPFCHPDFEASAEILNFIMNCCKVLIVGAGGLGCE 341
M+S + + RW+ + LL R G H DF S + + + + +VL+VGAGGLGCE
Sbjct: 1 MSSPDEDPPTEPERWRDLDMLLSRPGNLVHADFNPSPGLRDSLGSLVEVLVVGAGGLGCE 60
Query: 342 LLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVEFVNKRVPGCEAVA 521
LLKDLAL GFK +H++DMDTI++SNLNRQFLFR D+G KA+ A + V +RV G V
Sbjct: 61 LLKDLALSGFKNIHVIDMDTIDVSNLNRQFLFRVQDVGKSKAEVAAKRVMERVSGVNIVP 120
Query: 522 HHCAIQDLDEDFYRQFHIVVCGLDSIIARRWLNGMLVSLLQYNDD 656
H C I+D + +FY QF I+V GLDSI AR ++N + L+Y+ D
Sbjct: 121 HFCRIEDKEIEFYSQFSIIVLGLDSIEARSYINSVACGFLEYDSD 165
>07_03_1076 +
23779941-23779988,23780102-23780191,23781580-23781663,
23781792-23782010,23782873-23782974,23783809-23784207,
23784332-23784561,23784749-23784842,23784931-23785113,
23785254-23785351,23785831-23786143
Length = 619
Score = 120 bits (289), Expect = 1e-27
Identities = 59/126 (46%), Positives = 88/126 (69%), Gaps = 2/126 (1%)
Frame = +3
Query: 264 ASAEILNFIMNCCKVLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRR 443
ASA + KVL+VGAGG+GCELLK LAL GF+ +HI+D+DTIE+SNLNRQFLFR+
Sbjct: 6 ASAASEEEAVKAAKVLMVGAGGIGCELLKTLALSGFRDIHIIDLDTIEVSNLNRQFLFRQ 65
Query: 444 NDIGLPKAKCAVEFVNKRVPGCEAVAHHCAIQD--LDEDFYRQFHIVVCGLDSIIARRWL 617
+ +G KA A + V K P ++H ++D + +F++QF++V+ GLD++ ARR +
Sbjct: 66 SHVGQSKAHVARDAVLKFRPNINITSYHANVKDAQFNVEFFKQFNVVLNGLDNLDARRHV 125
Query: 618 NGMLVS 635
N + ++
Sbjct: 126 NRLCLA 131
>12_01_0038 -
312152-312748,312930-313362,313572-314440,314535-314584,
314589-315192,315674-315718,316100-316317,317020-317332,
318681-318716
Length = 1054
Score = 72.1 bits (169), Expect = 4e-13
Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 11/121 (9%)
Frame = +3
Query: 303 KVLIVGAGGLGCELLKDLALMGFK-----KLHIVDMDTIELSNLNRQFLFRRNDIGLPK- 464
K+ +VG+G LGCE LK+LALMG KL + D D IE SNL+RQFLFR +IG PK
Sbjct: 468 KIFMVGSGALGCEFLKNLALMGISCNQNGKLTVTDDDVIEKSNLSRQFLFRDWNIGQPKS 527
Query: 465 --AKCAVEFVNKRVPGCEAVAHHCAIQD---LDEDFYRQFHIVVCGLDSIIARRWLNGML 629
A A +N ++ EA+ + + + ++ F+ VV LD++ AR +++
Sbjct: 528 TVAATAAMAINPKL-HVEALQNRASPETENVFNDAFWESLDAVVNALDNVTARMYIDSRC 586
Query: 630 V 632
V
Sbjct: 587 V 587
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +3
Query: 306 VLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVE 482
VL+ G GLG E+ K+L L G K + + D D +EL +L+ F D+G +A+ V+
Sbjct: 104 VLVSGLNGLGAEIAKNLVLAGVKSVTLHDDDNVELWDLSSNFFLTEKDVGQNRAQTCVQ 162
>11_01_0039 -
290960-291086,291615-291714,291809-292013,292466-292513,
295071-295646,295828-296260,296470-297338,297433-298227,
298709-298753,299135-299352,300055-300364,302715-302984
Length = 1331
Score = 71.7 bits (168), Expect = 5e-13
Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 11/121 (9%)
Frame = +3
Query: 303 KVLIVGAGGLGCELLKDLALMGFK-----KLHIVDMDTIELSNLNRQFLFRRNDIGLPK- 464
K+ +VG+G LGCE LK+LALMG KL + D D IE SNL+RQFLFR +IG PK
Sbjct: 592 KIFMVGSGALGCEFLKNLALMGISCNQNGKLIVTDDDVIEKSNLSRQFLFRDWNIGQPKS 651
Query: 465 --AKCAVEFVNKRVPGCEAVAHHCAIQD---LDEDFYRQFHIVVCGLDSIIARRWLNGML 629
A A +N ++ EA+ + + + ++ F+ VV LD++ AR +++
Sbjct: 652 TVAATAAMAINPKL-HVEALQNRASPETENVFNDAFWESLDAVVNALDNVTARMYIDSRC 710
Query: 630 V 632
V
Sbjct: 711 V 711
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +3
Query: 306 VLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVE 482
VL+ G GLG E+ K+L L G K +++ D D +EL +L+ F D+G +A+ V+
Sbjct: 181 VLVSGLNGLGAEIAKNLVLAGVKSVNLHDDDNVELWDLSSNFFLTEKDVGQNRAQTCVQ 239
>03_02_0665 -
10268959-10269148,10269344-10269936,10270572-10271004,
10271172-10272040,10272121-10272915,10273612-10273829,
10274931-10275230,10276834-10277161
Length = 1241
Score = 65.3 bits (152), Expect = 4e-11
Identities = 44/120 (36%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Frame = +3
Query: 291 MNCCKVLIVGAGGLGCELLKDLALMGFK-----KLHIVDMDTIELSNLNRQFLFRRNDIG 455
M V +VG+G LGCE LK+LALMG KL I D D IE SNL+RQFLFR +IG
Sbjct: 589 MRDANVFVVGSGALGCEFLKNLALMGVSCGLKGKLTITDDDIIEKSNLSRQFLFRDWNIG 648
Query: 456 LPK---AKCAVEFVNKRVPGCEAVAHHCAIQD--LDEDFYRQFHIVVCGLDSIIARRWLN 620
K A A +N + C + + F+ +++ LD++ AR +++
Sbjct: 649 QAKSTVAAAAASAINSSLHINALQNRACPETEHVFHDKFWEGLDVIINALDNVNARMYMD 708
Score = 47.6 bits (108), Expect = 9e-06
Identities = 31/92 (33%), Positives = 45/92 (48%)
Frame = +3
Query: 306 VLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVEF 485
VL+ G GLG E+ K+LAL G K + + DM +E+ +L+ F +DIG + AV
Sbjct: 197 VLVSGLNGLGAEIAKNLALAGVKSITLHDMGNVEMWDLSGNFFLSEDDIGKNR---AVAC 253
Query: 486 VNKRVPGCEAVAHHCAIQDLDEDFYRQFHIVV 581
K AV +DL + +F VV
Sbjct: 254 TAKLQELNNAVLISTLTEDLTNEHLSKFQAVV 285
>07_03_1774 +
29425486-29425831,29426018-29426235,29426337-29427131,
29427206-29428074,29428317-29428749,29429263-29429859
Length = 1085
Score = 64.5 bits (150), Expect = 7e-11
Identities = 44/113 (38%), Positives = 61/113 (53%), Gaps = 10/113 (8%)
Frame = +3
Query: 312 IVGAGGLGCELLKDLALMGFK-----KLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCA 476
+VG+G LGCE LK+LALMG KL I D D IE SNL+RQFLFR +I K+ A
Sbjct: 502 VVGSGALGCEFLKNLALMGVSCSPKGKLTITDDDVIEKSNLSRQFLFRDWNIRQAKSTVA 561
Query: 477 VEFVNKRVPG-CEAVAHHCAIQDLDEDFYRQF----HIVVCGLDSIIARRWLN 620
+ P C + A D + F+ F +V+ LD++ AR +++
Sbjct: 562 AAAASAINPNLCIDALQNRACPDTENVFHDTFWEGLDVVINALDNVNARMYMD 614
Score = 35.5 bits (78), Expect = 0.038
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +3
Query: 348 KDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVEFVNKRVPGCEAVAHH 527
K+LAL G K + + D+ +E+ +L+ F NDIG +A V+K AV
Sbjct: 117 KNLALAGVKSVTLHDVKNVEMWDLSANFFLSENDIGKNRAAAC---VSKLQELNNAVLVS 173
Query: 528 CAIQDLDEDFYRQFHIVV 581
++L D +F VV
Sbjct: 174 ALTEELTTDHLSKFQAVV 191
>06_01_1006 +
7836366-7836460,7836568-7836626,7836877-7836961,
7837349-7837496,7837774-7837986,7838403-7838537,
7838659-7838790,7838884-7839099,7839212-7839336,
7839787-7839844,7839977-7840087
Length = 458
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/72 (36%), Positives = 40/72 (55%)
Frame = +3
Query: 306 VLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVEF 485
V+++G GG+G L G +L +VD D + LS+LNR + R+D+G PKA C +
Sbjct: 98 VVVIGLGGVGSHAASMLLRSGVGRLLLVDFDQVSLSSLNRHAVATRDDVGTPKALCLKKH 157
Query: 486 VNKRVPGCEAVA 521
+ P C+ A
Sbjct: 158 FSMIYPECQIEA 169
>02_05_1131 -
34328168-34328557,34328838-34328957,34329067-34329185,
34329659-34329767,34329847-34329885,34341125-34341203,
34341483-34341547,34341850-34341905,34342141-34342233,
34342312-34342579
Length = 445
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/55 (47%), Positives = 33/55 (60%)
Frame = +3
Query: 306 VLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAK 470
+L+VGAGGLG + LA G L IVD D +EL NL+RQ + +G PK K
Sbjct: 99 ILVVGAGGLGSPVAMYLAACGVGCLGIVDGDRVELDNLHRQIIHIEAYVGQPKVK 153
>02_04_0046 +
19211961-19212231,19212651-19212706,19212947-19213011,
19213138-19213212,19213305-19213383,19213591-19213629,
19213712-19213820,19214334-19214452,19215282-19215401,
19215846-19216232
Length = 439
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +3
Query: 342 LLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVEFVNKRVPGCEAVA 521
LL D + G L IVD D +EL+NL+RQ + + +G K K A + + +
Sbjct: 83 LLPDFGVEGC--LGIVDGDDVELNNLHRQIIHKEAFVGKSKVKSAADACREINSSINVME 140
Query: 522 HHCAIQDLDE-DFYRQFHIVVCGLDSIIARRWLNGMLVSL 638
+H ++ + + R++ IVV D++ R ++ V L
Sbjct: 141 YHHTLKPSNALEIVRKYDIVVDATDNLPTRYMISDCCVLL 180
>01_05_0699 -
24376987-24377154,24377259-24377406,24377530-24377645,
24377743-24377925,24377998-24378186,24378273-24378497,
24378514-24378759,24378836-24378983,24379126-24379241,
24379441-24379497,24379735-24379923,24380001-24380150,
24380323-24380404,24380484-24380601,24380713-24380899,
24381044-24381138,24381223-24381277,24381376-24381567,
24381657-24381853,24382534-24382684
Length = 1003
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 366 GFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVEFVNKRVPGCEA 515
G +KL +VD + +SNL RQ L+ +D PKA + + +R P +A
Sbjct: 689 GVRKLTVVDSGRVVVSNLARQSLYTSDDRDSPKASAILGRLKERCPSVDA 738
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +3
Query: 366 GFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVEFVNKRVPGCEAVAHHCAIQDL 545
G +KL +VD + +S+L +Q L+ D G+P+ V + +R E I L
Sbjct: 362 GVRKLTVVDDGCVSMSDLVKQSLYTDKDCGVPRVTAIVPHLKERCSAVEVEGIQMGIPKL 421
Query: 546 D 548
+
Sbjct: 422 E 422
>12_01_0624 -
5137096-5137310,5137923-5138380,5138428-5140070,
5140245-5140462,5140589-5140757,5141249-5141305
Length = 919
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -3
Query: 198 YFDNQPFEILKSL*CGSIPSFINRNLRRK 112
++ +PF++ ++ C SI +NR+LRRK
Sbjct: 829 FYTREPFKLDTNIVCSSISRGLNRSLRRK 857
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,569,958
Number of Sequences: 37544
Number of extensions: 326420
Number of successful extensions: 858
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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