Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16d18
(665 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membran... 178 2e-45
Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical pr... 107 7e-24
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p... 83 2e-16
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p... 83 2e-16
AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical ... 62 3e-10
Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical p... 48 8e-06
U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical p... 48 8e-06
AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical ... 48 8e-06
U13875-1|AAA21162.2| 541|Caenorhabditis elegans Yeast ula (ubiq... 43 2e-04
Z72502-6|CAA96591.1| 343|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z73899-5|CAA98080.1| 372|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z70311-4|CAA94373.1| 541|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL034365-3|CAA22261.1| 563|Caenorhabditis elegans Hypothetical ... 29 3.0
>U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membrane
ruffles in embryoprotein 1 protein.
Length = 430
Score = 178 bits (434), Expect = 2e-45
Identities = 79/147 (53%), Positives = 108/147 (73%)
Frame = +3
Query: 201 RWQHIRKLLERSGPFCHPDFEASAEILNFIMNCCKVLIVGAGGLGCELLKDLALMGFKKL 380
RW+ IR+L +R + P F E + N K+L++GAGGLGCELLK+LAL GF+ +
Sbjct: 11 RWRSIRRLTDRDSAYKVPWFVPGPENFEALQNT-KILVIGAGGLGCELLKNLALSGFRTI 69
Query: 381 HIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVEFVNKRVPGCEAVAHHCAIQDLDEDFY 560
++DMDTI++SNLNRQFLFR +D+G KA+ A FV +RV GC+ AH+C I+D ++FY
Sbjct: 70 EVIDMDTIDVSNLNRQFLFRESDVGKSKAEVAAAFVQQRVVGCQVTAHNCRIEDKGQEFY 129
Query: 561 RQFHIVVCGLDSIIARRWLNGMLVSLL 641
R+F I++CGLDSI ARRW+NGML L+
Sbjct: 130 RKFSIIICGLDSIPARRWINGMLCDLV 156
>Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical
protein W02A11.4 protein.
Length = 582
Score = 107 bits (257), Expect = 7e-24
Identities = 49/110 (44%), Positives = 77/110 (70%), Gaps = 2/110 (1%)
Frame = +3
Query: 303 KVLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVE 482
K+L++GAGG+GCELLK+LA+ GF+K+H++D+DTI++SNLNRQFLFR+ + KA A +
Sbjct: 15 KILVIGAGGIGCELLKNLAVTGFRKVHVIDLDTIDISNLNRQFLFRKEHVSSSKAATATQ 74
Query: 483 FVNKRVPGCEAVAHHCAI--QDLDEDFYRQFHIVVCGLDSIIARRWLNGM 626
V + P E H +I + + +F++ + IV+ LD+ AR ++N M
Sbjct: 75 VVKQFCPQIELTFDHDSIFEKKYNMEFFQAYDIVLNALDNRAARNYVNRM 124
>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
protein C47E12.5b protein.
Length = 1028
Score = 83.0 bits (196), Expect = 2e-16
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 11/114 (9%)
Frame = +3
Query: 312 IVGAGGLGCELLKDLALMGFK-----KLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCA 476
+VGAG +GCELLK+L++MG + I DMD IE+SNLNRQFLFRR D+G K++CA
Sbjct: 437 VVGAGAIGCELLKNLSMMGVACGEGGLIKITDMDQIEISNLNRQFLFRRRDVGGKKSECA 496
Query: 477 VEFV---NKRVPGCEAVAHHCAIQD---LDEDFYRQFHIVVCGLDSIIARRWLN 620
V N V EA+A ++ +++F+ + + V LD++ ARR+++
Sbjct: 497 ARAVTAFNSDV-RIEALAERVGLETEHIFNDEFFGELNGVANALDNVDARRYMD 549
>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
protein C47E12.5a protein.
Length = 1113
Score = 83.0 bits (196), Expect = 2e-16
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 11/114 (9%)
Frame = +3
Query: 312 IVGAGGLGCELLKDLALMGFK-----KLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCA 476
+VGAG +GCELLK+L++MG + I DMD IE+SNLNRQFLFRR D+G K++CA
Sbjct: 522 VVGAGAIGCELLKNLSMMGVACGEGGLIKITDMDQIEISNLNRQFLFRRRDVGGKKSECA 581
Query: 477 VEFV---NKRVPGCEAVAHHCAIQD---LDEDFYRQFHIVVCGLDSIIARRWLN 620
V N V EA+A ++ +++F+ + + V LD++ ARR+++
Sbjct: 582 ARAVTAFNSDV-RIEALAERVGLETEHIFNDEFFGELNGVANALDNVDARRYMD 634
>AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical
protein F42G8.6 protein.
Length = 402
Score = 62.1 bits (144), Expect = 3e-10
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +3
Query: 306 VLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVEF 485
VLIVGAGGLGC + L G + IVD D I L NL+RQ ++ + +G KA+ +
Sbjct: 40 VLIVGAGGLGCPVATYLGAAGIGTIGIVDYDHISLDNLHRQVAYKEDQVGKSKAQALADN 99
Query: 486 VNKRVPGCEAVAHHCAIQDLDE-DFYRQFHIVVCGLDSIIARRWLNGMLVSL 638
+ + H+ ++ + ++ + IV D++ R +N + V L
Sbjct: 100 IKLQNSDLNVQVHNTSLDSSNAMQLFKNYEIVCDCTDNVATRYLINDVCVLL 151
>Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 47.6 bits (108), Expect = 8e-06
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 303 KVLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRND--IGLPKAKCA 476
KVLI+GAG LGC + + L G + + +D T+ +N RQ L D +G KA+ A
Sbjct: 326 KVLILGAGTLGCNIARCLIGWGVRHISFLDNSTVSYNNPVRQSLSEFEDARLGRGKAETA 385
Query: 477 VEFVNKRVPGCEAVAHHCAI 536
+ + P +A AH +
Sbjct: 386 QAAIQRIFPSIQATAHRLTV 405
>U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical
protein T03F1.1 protein.
Length = 419
Score = 47.6 bits (108), Expect = 8e-06
Identities = 26/81 (32%), Positives = 43/81 (53%)
Frame = +3
Query: 306 VLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVEF 485
V +VG GG+G + + L G KL + D D +E++N+NR F ++ N GL K + A +
Sbjct: 87 VAVVGVGGVGSVVAEMLTRCGIGKLILFDYDKVEIANMNRLF-YQPNQAGLSKVEAARDT 145
Query: 486 VNKRVPGCEAVAHHCAIQDLD 548
+ P + H+ I +D
Sbjct: 146 LIHVNPDVQIEVHNFNITTMD 166
>AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 47.6 bits (108), Expect = 8e-06
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 303 KVLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRND--IGLPKAKCA 476
KVLI+GAG LGC + + L G + + +D T+ +N RQ L D +G KA+ A
Sbjct: 326 KVLILGAGTLGCNIARCLIGWGVRHISFLDNSTVSYNNPVRQSLSEFEDARLGRGKAETA 385
Query: 477 VEFVNKRVPGCEAVAHHCAI 536
+ + P +A AH +
Sbjct: 386 QAAIQRIFPSIQATAHRLTV 405
>U13875-1|AAA21162.2| 541|Caenorhabditis elegans Yeast ula
(ubiquitin activating)homolog protein 1 protein.
Length = 541
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/70 (27%), Positives = 37/70 (52%)
Frame = +3
Query: 312 IVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLFRRNDIGLPKAKCAVEFVN 491
++G+ L E+LK L L G + ++VD +E +++ + F +DIG +A+ +E +
Sbjct: 32 VLGSDSLATEILKSLVLAGVQSFYVVDDAKVEQADIGQNFFLHADDIGRSRAEATLEKLT 91
Query: 492 KRVPGCEAVA 521
+ P A
Sbjct: 92 ELNPSVSGSA 101
>Z72502-6|CAA96591.1| 343|Caenorhabditis elegans Hypothetical
protein C08B6.9 protein.
Length = 343
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +3
Query: 273 EILNFIMNCCKVLIVGAGGLGCELLKDLALMGFKKLHIVDMDTIELSNLNRQFLF 437
E N I N KVLI+G LG E+ K L+L G ++H+VD ++ + FL+
Sbjct: 21 EAQNKIRNS-KVLIIGGKQLGAEVAKTLSLAGVDEMHLVDHRLVDTEEIGMNFLY 74
>Z73899-5|CAA98080.1| 372|Caenorhabditis elegans Hypothetical
protein ZK829.7 protein.
Length = 372
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = +3
Query: 300 CKVLIVGAGGLGCELLK----DLALMGFKKLHIVDMDTIE 407
C +LIVGAGGLG LLK LA+ KK+ ++ D E
Sbjct: 166 CNILIVGAGGLGLWLLKLAKHFLAINNDKKIRLMVADAKE 205
>Z70311-4|CAA94373.1| 541|Caenorhabditis elegans Hypothetical
protein T25B9.5 protein.
Length = 541
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 195 NRRWQHIRKLLE---RSGPFCHPDFEASAEILNFIMNCCKVLIVGAGG 329
NRR+ HIR+LLE ++ PF P S +++ +N K L GA G
Sbjct: 140 NRRFLHIRQLLEAWPQATPFLIPTPRGSNVLIHSTINLDKKLGCGAFG 187
>AL034365-3|CAA22261.1| 563|Caenorhabditis elegans Hypothetical
protein Y69E1A.3 protein.
Length = 563
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 195 NRRWQHIRKLLE---RSGPFCHPDFEASAEILNFIMNCCKVLIVGAGG 329
NRR+ HIR+LLE ++ PF P S +++ +N K L GA G
Sbjct: 163 NRRFLHIRQLLEAWSQATPFLIPTPRGSNVLIHSTINLDKKLGCGAFG 210
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,820,155
Number of Sequences: 27780
Number of extensions: 305083
Number of successful extensions: 765
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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