Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16d17
         (674 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   3.8  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    24   3.8  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    24   5.0  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    24   5.0  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    24   5.0  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     23   6.7  
L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.       23   8.8  
L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.       23   8.8  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +3

Query: 237 HINIYIVFHALPPFLRLNNSLNNCIAYSLMF*H-SHLATV*FEDVYF*NSILHRFVPWV 410
           H+   +V   +PP   +   L   + ++++    S   TV   +V+F +   HR  PWV
Sbjct: 286 HVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHRMAPWV 344


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +3

Query: 237 HINIYIVFHALPPFLRLNNSLNNCIAYSLMF*H-SHLATV*FEDVYF*NSILHRFVPWV 410
           H+   +V   +PP   +   L   + ++++    S   TV   +V+F +   HR  PWV
Sbjct: 286 HVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHRMAPWV 344


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 152 SWWLQFFI*LW 120
           SWW QF+  LW
Sbjct: 417 SWWTQFYCILW 427


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 152 SWWLQFFI*LW 120
           SWW QF+  LW
Sbjct: 417 SWWTQFYCILW 427


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 152 SWWLQFFI*LW 120
           SWW QF+  LW
Sbjct: 395 SWWTQFYCILW 405


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 647 YLLNFALRMPPRNIRLIKFKYHQ 579
           YLL+FA ++P  ++RL    YHQ
Sbjct: 192 YLLDFARKVPGNSVRLA--FYHQ 212


>L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 112 MKNKRFFYHGHQHQCHNMVQS 50
           +K K+F +H     CH  V++
Sbjct: 118 LKKKKFLFHQDNAPCHKSVKT 138


>L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 112 MKNKRFFYHGHQHQCHNMVQS 50
           +K K+F +H     CH  V++
Sbjct: 118 LKKKKFLFHQDNAPCHKSVKT 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,803
Number of Sequences: 2352
Number of extensions: 14206
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)