Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16d07
         (677 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47809-3|CAA87781.2|  322|Caenorhabditis elegans Hypothetical pr...    54   9e-08
Z81536-9|CAB04362.1|  733|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p...    29   2.3  
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p...    29   2.3  
Z81044-11|CAB02809.2|  476|Caenorhabditis elegans Hypothetical p...    29   3.0  
AF025452-9|AAB70946.1|  348|Caenorhabditis elegans Hypothetical ...    29   3.0  
Z81493-10|CAB04044.2|  508|Caenorhabditis elegans Hypothetical p...    28   5.3  
U49954-1|AAA93426.1|  388|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AF039711-9|ABS19467.1|  281|Caenorhabditis elegans Temporarily a...    28   7.0  
AC006677-10|AAF39946.1|  330|Caenorhabditis elegans Serpentine r...    28   7.0  
AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of...    27   9.3  

>Z47809-3|CAA87781.2|  322|Caenorhabditis elegans Hypothetical
           protein F42A8.3 protein.
          Length = 322

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
 Frame = +2

Query: 236 CTKLLDEFADSASNFTKCSIKHARPIRLCEKCIDHYVKFRE---SYKNLLQT-NLNGTSC 403
           C K +++ A   S    C+   + P  +C KC  +Y+ F++     KNL    +L+  +C
Sbjct: 42  CQKYVEKLAVVQSEMVACATNWSIPPVVCTKCFQNYINFKQFEYETKNLNNVYSLDNRTC 101

Query: 404 ETIFISHDRLEVVLNYHDNILA-IWNKGNCNDC----FNWTKDKPEI--SNKTYHFYQIF 562
             +   +  L    +    + + IW K  C+ C    +N+ ++K E+  S +T  F    
Sbjct: 102 SQVIYDNYLLSYSTDISKALTSEIWEKSRCDSCITIKWNFPQNKSEVSFSERTMQFQNRM 161

Query: 563 NETMQCI---------EDNINPKENSTKVCENCMQSYIQLNNYY 667
            E   C+         +DN+    N +K+C  C  ++ +L  YY
Sbjct: 162 YEWRNCVVNYTSGGVLDDNLT---NGSKICNLCKTTFDELFGYY 202


>Z81536-9|CAB04362.1|  733|Caenorhabditis elegans Hypothetical
           protein F40D4.12 protein.
          Length = 733

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
 Frame = +2

Query: 311 IRLCEKCIDHYVKFRESYKNLLQTNLNGTSCETIFISHD----RLEVVLNYH-DNILAIW 475
           IR CE C +   K R  ++ LLQ       CE+  I  +    R++V + Y  DN+ +I 
Sbjct: 481 IRHCELCQETENKHRNEFRKLLQKYRWNFECESDLIKQESYVQRVDVFIKYFGDNLKSIG 540

Query: 476 NK 481
           +K
Sbjct: 541 HK 542


>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +2

Query: 293  IKHARPIRLCEKCIDHYVKFRESYKNLLQ 379
            I++ + + +CEKC + ++KF E  K + +
Sbjct: 1106 IENGQIVDMCEKCFEQHIKFTEEQKYMFE 1134


>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +2

Query: 293  IKHARPIRLCEKCIDHYVKFRESYKNLLQ 379
            I++ + + +CEKC + ++KF E  K + +
Sbjct: 1106 IENGQIVDMCEKCFEQHIKFTEEQKYMFE 1134


>Z81044-11|CAB02809.2|  476|Caenorhabditis elegans Hypothetical
           protein C30H6.4 protein.
          Length = 476

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 455 DNILAIWNKGNCNDCFNWTKDKPE 526
           DN+  IW  G+  DC  W  D P+
Sbjct: 167 DNVTYIWTDGSPTDCLWWQPDYPK 190


>AF025452-9|AAB70946.1|  348|Caenorhabditis elegans Hypothetical
           protein B0454.9 protein.
          Length = 348

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +2

Query: 434 EVVLNYHDNILAIWNKGNCNDCFNWTKDKPEISNKTY 544
           +VVLN  + I AIW   NC + +N  K  PE++ + Y
Sbjct: 58  KVVLNEIEKIPAIW---NCKNTYNANKLYPEVAVQVY 91


>Z81493-10|CAB04044.2|  508|Caenorhabditis elegans Hypothetical
           protein F01D5.9 protein.
          Length = 508

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/49 (24%), Positives = 26/49 (53%)
 Frame = +2

Query: 236 CTKLLDEFADSASNFTKCSIKHARPIRLCEKCIDHYVKFRESYKNLLQT 382
           C + LDE  +  S   +CS++  + ++  EKC+   ++ R S   + ++
Sbjct: 341 CHEELDEIFEGTSR--ECSVEDLKKMKYLEKCVKEALRMRPSVPQMARS 387


>U49954-1|AAA93426.1|  388|Caenorhabditis elegans Hypothetical
           protein Y102E9.2 protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 16/68 (23%), Positives = 31/68 (45%)
 Frame = +2

Query: 404 ETIFISHDRLEVVLNYHDNILAIWNKGNCNDCFNWTKDKPEISNKTYHFYQIFNETMQCI 583
           ++ F+ H      L   DN  ++W+ G   + +NW+  K     +T    Q F+  ++ I
Sbjct: 191 DSFFLGHTEYVKTLAVQDND-SLWSSGGDKNLYNWSIAKCSAPRRTLDLSQ-FDAPIRKI 248

Query: 584 EDNINPKE 607
             N+  K+
Sbjct: 249 SINLQHKK 256


>AF039711-9|ABS19467.1|  281|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 296 protein.
          Length = 281

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 492 MIVLTGLKINQKFQIKLTIFIKFLMKQCNVL 584
           M++   L +NQ+F+IK T FI  LMK   +L
Sbjct: 1   MLLNHALTMNQQFKIKTTAFIIHLMKVYRLL 31


>AC006677-10|AAF39946.1|  330|Caenorhabditis elegans Serpentine
           receptor, class j protein18 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 12/52 (23%), Positives = 27/52 (51%)
 Frame = -2

Query: 634 TVLTHFCTILFGIYIVFNTLHCFIKNLIKMVSFI*NFWFIFSPVKTIITISF 479
           T+++  C  + G Y + N    F  N++K  SF+ +++  +  + +I  + F
Sbjct: 90  TLISLRCAFIAGTYGILNIHFIFRYNVLKNTSFVSHYFMPYGLILSIFLVIF 141


>AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of
           constitutive dauerformation protein 2 protein.
          Length = 1446

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
 Frame = +2

Query: 371 LLQTNLNGTSCETIFISHDRLEV-VLNYHDNILAIWNKGN-CNDCFNWTKDKPEISNKTY 544
           LL  N + TS + I +  +  ++ +L    N++A   + N CN+  ++   + + + KTY
Sbjct: 66  LLAPNCSLTSVKNIKLRLNGNDIYILLEVSNLMANDIQENTCNETSSFCDHRVDSTYKTY 125

Query: 545 HFYQIFNETMQCIEDNINPKENSTKV 622
           H+ Q   E   C  +  + + NST++
Sbjct: 126 HYEQ---EKCNCFIETCDEETNSTEL 148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,972,633
Number of Sequences: 27780
Number of extensions: 331832
Number of successful extensions: 962
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)