Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16d06
(602 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0470 - 10700092-10700505 149 2e-36
10_08_0951 - 21769342-21769752 149 2e-36
02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924... 35 0.043
08_02_1046 - 23919990-23920183,23920251-23920479,23920624-239210... 32 0.40
01_01_0249 + 2047793-2048561,2049861-2049896,2050068-2051012,205... 31 0.70
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 30 1.2
06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,376... 30 1.6
02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042 30 1.6
01_01_0235 - 1964981-1964997,1965545-1966325 30 1.6
04_04_0211 - 23636377-23636532,23636624-23636805,23637853-236379... 29 3.7
09_01_0103 - 1628763-1628879,1641827-1642921,1645126-1645476,164... 28 5.0
05_04_0110 + 18058821-18058900,18059119-18059182,18059351-180594... 28 5.0
04_04_1192 + 31611804-31612113,31612235-31614058,31614098-316148... 28 5.0
12_02_0502 - 19746100-19746185,19746745-19750474 28 6.5
08_02_1498 + 27553449-27553730,27553834-27553946,27554063-275541... 28 6.5
06_03_0860 + 25484826-25485758,25486155-25486406 28 6.5
05_06_0119 + 25742277-25742434,25742976-25743061,25743146-257432... 28 6.5
12_02_0674 - 21745321-21746223,21746229-21747608 27 8.7
10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,826... 27 8.7
08_02_0167 - 13564466-13566227,13566361-13566644,13566684-135675... 27 8.7
08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,390... 27 8.7
04_03_0925 - 20856628-20856690,20856786-20856845,20856924-208570... 27 8.7
04_03_0540 + 16929782-16929834,16929937-16930032,16930111-169301... 27 8.7
01_06_1350 + 36505926-36505978,36506081-36506176,36506255-365063... 27 8.7
>02_02_0470 - 10700092-10700505
Length = 137
Score = 149 bits (361), Expect = 2e-36
Identities = 68/137 (49%), Positives = 98/137 (71%), Gaps = 3/137 (2%)
Frame = +1
Query: 157 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 336
M K +KPGK V++L GRYAGRKA++V+ ++EGT D+PYGH VAG+ +YP+KV ++
Sbjct: 1 MVKFLKPGKAVILLQGRYAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAK 60
Query: 337 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKR-KKLRF--NTRVRFE 507
K K+S++K F+K+VN+ H+MPTRYT+D F+ ++ A R KK+ + R E
Sbjct: 61 KTAKKSRVKCFLKLVNFTHIMPTRYTLDVDFKDVASGGPDALATRDKKVAACKAAKARLE 120
Query: 508 ERYKSGKNKWFFQKLRF 558
ER+K+GKN+WFF KLRF
Sbjct: 121 ERFKTGKNRWFFTKLRF 137
>10_08_0951 - 21769342-21769752
Length = 136
Score = 149 bits (360), Expect = 2e-36
Identities = 65/136 (47%), Positives = 98/136 (72%), Gaps = 2/136 (1%)
Frame = +1
Query: 157 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 336
M K +KPGK V++L GR+AGRKA++V+ ++EGT D+PYGH VAG+ +YP+KV ++
Sbjct: 1 MVKFLKPGKAVILLQGRFAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAK 60
Query: 337 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRF--NTRVRFEE 510
K K+S++K F+K+VN+ HLMPTRYT+D ++ +A + KK+ + + R E+
Sbjct: 61 KTAKKSRVKCFLKLVNFTHLMPTRYTLDVDLKEVAAGPDALATRDKKVAACKSAKARLED 120
Query: 511 RYKSGKNKWFFQKLRF 558
R+K+GKN+WFF KLRF
Sbjct: 121 RFKTGKNRWFFTKLRF 136
>02_04_0433 -
22891261-22891509,22892181-22892301,22892405-22892496,
22892692-22892755,22892855-22892920,22893102-22893193,
22893991-22894050,22894181-22894270,22894484-22894613,
22895066-22895157,22895299-22895373,22895663-22895754,
22896496-22896586,22897541-22897574,22897745-22897791,
22899110-22899209,22899300-22899436,22900837-22901015,
22901146-22901188,22901264-22901297,22901839-22901948,
22902043-22902224,22903062-22903168,22903266-22903480
Length = 833
Score = 35.1 bits (77), Expect = 0.043
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 145 HPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 252
+P+K+ + PG V+++L+GRY G++ + +K G
Sbjct: 67 NPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSG 102
>08_02_1046 -
23919990-23920183,23920251-23920479,23920624-23921057,
23921426-23921567,23922163-23922255,23923132-23923245,
23924181-23924266,23924458-23924506,23924717-23924783,
23925550-23925665,23925698-23925821,23926465-23926553,
23926810-23927061
Length = 662
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 VRGSQGYRSQELRRRYLRQAVRACFRRWYRQVPPESAQ--EDGKE*NPQEVQDKAFRE 374
V G+ G + ++RR+L QA+ + +R R PP +A E + P +++ AF E
Sbjct: 24 VAGAGGRKRGRVQRRHLTQALESFWRHAPRPAPPAAAARGEANRSWQPPPLENPAFEE 81
>01_01_0249 +
2047793-2048561,2049861-2049896,2050068-2051012,
2051215-2051264
Length = 599
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 409 NVLASSDYS-LQPSRKALSWTSCGFYSFPSSCALSGGTCRYQRRKHARTAC 260
N+ A ++YS L L W GF +C SGG CRY A AC
Sbjct: 194 NLTAGTNYSPLFKKGFVLEWQKNGFGDC-DACNASGGQCRYNNDSAAAFAC 243
>08_02_0520 -
18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -3
Query: 195 DQHYFTRLHYLTHLGGMFLLLVSHKFNILVRF*L--IFKPILWIFRDYVY 52
+ H+ TR + +LG +F +V+H FN + I P+ + RDY++
Sbjct: 595 NMHHETRTDGIVYLGALFFAMVAHMFNGFSELAMATIKLPVFFKQRDYLF 644
>06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,
3764013-3764961,3766967-3767064,3768144-3768284,
3768758-3768874,3768924-3769013,3769014-3771818
Length = 1632
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +3
Query: 192 GLKWPVRGSQGYRSQELRRRYLRQAVRACFRRWYRQ--VPPE-SAQEDGKE*N-PQEVQD 359
G KW + + RS E +R ++ +A+R R + ++ +PP DG E N +EV D
Sbjct: 1000 GNKWDMCTKEHSRSNEFKRLFVPEAIRKLIRPYDKELSIPPVFPGVHDGNEVNSKEEVND 1059
Query: 360 KA 365
+
Sbjct: 1060 SS 1061
>02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042
Length = 819
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 468 FCRVFQVFCAEFFKAEVNCITCWHQVIIVYNLHERLYL 355
F + F+ C ++ EV T W +I YNLH ++L
Sbjct: 378 FIKEFKA-CINDYEEEVEFFTAWEAMISKYNLHNNVWL 414
>01_01_0235 - 1964981-1964997,1965545-1966325
Length = 265
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -2
Query: 409 NVLASSDYSLQPSRK-ALSWTSCGFYSFPSSCALSGGTCRYQRRKHARTAC 260
N+ A ++YS Q + L W GF +C SGG CRY A AC
Sbjct: 198 NLTAGTNYSPQFKKGFVLEWQKNGFGDC-DACNGSGGQCRYINDSAAAFAC 247
>04_04_0211 -
23636377-23636532,23636624-23636805,23637853-23637959,
23637997-23638280
Length = 242
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 157 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 252
M + PG V+++L+GR+ G++ + +K G
Sbjct: 94 MRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 125
>09_01_0103 -
1628763-1628879,1641827-1642921,1645126-1645476,
1645567-1645734
Length = 576
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 482 RSFLRFAGSFRSFALNFSKLKSTV*RV 402
RSFL AG +R F NFSK+ ++ R+
Sbjct: 453 RSFLGLAGYYRRFIENFSKIAKSMTRL 479
>05_04_0110 +
18058821-18058900,18059119-18059182,18059351-18059437,
18059521-18059598,18060105-18060201,18060817-18060860,
18061071-18061257,18061324-18061406
Length = 239
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 415 LYNVLASSDYSLQPSRKALSWT 350
+YN L SSD S + SRK WT
Sbjct: 46 IYNALTSSDQSSKESRKMALWT 67
>04_04_1192 + 31611804-31612113,31612235-31614058,31614098-31614842,
31615047-31616835,31617136-31617163,31617343-31617794
Length = 1715
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +1
Query: 292 IDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF----EKFSAKDLK 456
I Y R++ M ++ + K+K F +NY+H R T ++ E S KDLK
Sbjct: 919 IGTYNRELTSNMRILRMERCDKLKDFTLFLNYDHFRVERKTWQWTILPFEEMHSLKDLK 977
>12_02_0502 - 19746100-19746185,19746745-19750474
Length = 1271
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 404 HVIQLTSALKNSAQKT*KTLQNVRSCVSTREYVLK 508
H++ S L N + + + LQNVR+C E LK
Sbjct: 729 HMLSALSTLTNLKRLSLRNLQNVRNCKDAMEIKLK 763
>08_02_1498 +
27553449-27553730,27553834-27553946,27554063-27554129,
27554310-27554402,27554516-27554659,27554860-27554954,
27555120-27555412,27555514-27555632,27555742-27556094,
27556177-27556286,27556403-27556512,27556802-27557671
Length = 882
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 196 LSGRYAGRKAIVVKNYDEGTSD-KPYGHAFVAGIDRYPRKVHKRMGKNKI 342
L R AG + ++ + GT D G V G+D R+VH G +
Sbjct: 599 LEHRMAGVYTVTIRGLNTGTLDLTTNGWGHVVGLDGERRRVHSEQGMGAV 648
>06_03_0860 + 25484826-25485758,25486155-25486406
Length = 394
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 245 TKVPPTSRTGMLSSLVSTGTPGKCTRGWER 334
T PP+ R + SSL+ TP KC+ G E+
Sbjct: 130 TPRPPSVRPVVASSLLPYTTPAKCSTGGEQ 159
>05_06_0119 +
25742277-25742434,25742976-25743061,25743146-25743223,
25743919-25744031,25744094-25744171,25744941-25744949,
25744981-25745082,25745165-25745714,25745941-25746146,
25746868-25747031,25747157-25747310
Length = 565
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -3
Query: 336 ILSHPLVHFPGVPVDTSDESMPVRLVGGTFVVILDYDSLATRVPAT*DQHYFTRLHYLTH 157
ILS P+++ GV V ++P+RL+ G FV ++ P T F L Y H
Sbjct: 98 ILSLPMLYLQGV-VLFPGATLPLRLIQGRFVAAVEKALRQVDAPCTIGVFNFQVLMYKRH 156
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 233 SRITTKVPPTSRTGMLSSLVS--TGTPGKC 316
S T+K+P T RT +LSS S TP C
Sbjct: 534 STATSKIPSTPRTSLLSSSTSKIPSTPSTC 563
>10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,
8265508-8265704,8275672-8275824
Length = 1034
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 482 RSFLRFAGSFRSFALNFSKLKSTV*RV 402
RSFL AG +R F NFSK+ + R+
Sbjct: 954 RSFLGLAGYYRRFIENFSKIDKPMTRL 980
>08_02_0167 -
13564466-13566227,13566361-13566644,13566684-13567540,
13567684-13567957,13567973-13568218
Length = 1140
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 482 RSFLRFAGSFRSFALNFSKL 423
RSFL AG +R F NFSK+
Sbjct: 505 RSFLGLAGYYRRFIKNFSKI 524
>08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,
3908317-3908337
Length = 1230
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 482 RSFLRFAGSFRSFALNFSKLKSTV*RV 402
RSFL AG +R F NFSK+ + R+
Sbjct: 985 RSFLGLAGYYRRFIENFSKIAKPMTRL 1011
>04_03_0925 -
20856628-20856690,20856786-20856845,20856924-20857001,
20857127-20857192,20857542-20858675,20858991-20860283
Length = 897
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -3
Query: 444 CAEFFKAEVNCITCWHQVIIVYNLHERLYL 355
C ++ E +T W +I +NLH+ ++L
Sbjct: 436 CINLYEEETEFLTSWDAMINKHNLHDNVWL 465
>04_03_0540 +
16929782-16929834,16929937-16930032,16930111-16930185,
16930819-16930893,16930987-16931209,16931303-16931546,
16932111-16932568,16932647-16932928,16933032-16933733
Length = 735
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -3
Query: 471 TFCRVFQVFCAEFFKAEVNCITCWHQVIIVYNLHERLYLGPLVDFILSHPLVHF 310
TF + F + E + WH++I YNL + +YL + D V+F
Sbjct: 298 TFKKAFHKVLTQTLTEE-EFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYF 350
>01_06_1350 +
36505926-36505978,36506081-36506176,36506255-36506329,
36506964-36507038,36507132-36507348,36507442-36507685,
36508250-36508707,36508786-36509067,36509171-36509872
Length = 733
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -3
Query: 471 TFCRVFQVFCAEFFKAEVNCITCWHQVIIVYNLHERLYLGPLVDFILSHPLVHF 310
TF + F + E + WH++I YNL + +YL + D V+F
Sbjct: 296 TFKKAFHKVLTQTLTEE-EFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYF 348
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,253,315
Number of Sequences: 37544
Number of extensions: 310122
Number of successful extensions: 899
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -