Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16c19
(271 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016415-3|AAW88418.1| 658|Caenorhabditis elegans Hypothetical ... 28 0.79
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 28 1.0
U80838-7|AAC71112.3| 581|Caenorhabditis elegans Hypothetical pr... 27 1.4
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 27 1.8
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 27 1.8
Z81544-6|CAI46607.1| 376|Caenorhabditis elegans Hypothetical pr... 27 2.4
U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical p... 26 3.2
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 26 3.2
U39653-4|AAL56624.1| 649|Caenorhabditis elegans Prion-like-(q/n... 26 3.2
Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z50794-6|CAA90659.2| 388|Caenorhabditis elegans Hypothetical pr... 26 4.2
U50300-8|AAC48105.1| 646|Caenorhabditis elegans Hypothetical pr... 25 5.6
U23519-9|ABS19470.1| 203|Caenorhabditis elegans Hypothetical pr... 25 5.6
CU457741-9|CAM36350.2| 252|Caenorhabditis elegans Hypothetical ... 25 5.6
Z83104-4|CAB05478.2| 582|Caenorhabditis elegans Hypothetical pr... 25 7.3
AL021491-1|CAA16373.2| 319|Caenorhabditis elegans Hypothetical ... 25 7.3
AF125450-1|AAD12815.1| 188|Caenorhabditis elegans Hypothetical ... 25 7.3
AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in... 25 7.3
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z68335-3|CAA92730.2| 540|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z35604-3|CAA84679.1| 352|Caenorhabditis elegans Hypothetical pr... 25 9.7
>AF016415-3|AAW88418.1| 658|Caenorhabditis elegans Hypothetical
protein C02A12.8 protein.
Length = 658
Score = 28.3 bits (60), Expect = 0.79
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +1
Query: 4 LSSDLWTCISAPLPEQRATNTTVLSCKSLHQHIQLLHSNYVTQWTISIVNLKMVRNTHLF 183
L+ L T ++A + + + + +L+ K+L + + Y+ W I + L N+++F
Sbjct: 269 LTRPLVTVVTAFIIKLESESNQILNSKTLSYIGDISYVMYLVHWPIISIFLSSNVNSYVF 328
Query: 184 CKMYSKLVA 210
C + + LV+
Sbjct: 329 CVVTTILVS 337
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 5 CRPICGPASPLLCQSSVPPTQRCYPVNPC 91
C+P C PL Q+ VP +C P PC
Sbjct: 380 CQPSCTNPVPLTTQAPVPVVNQCIP--PC 406
Score = 24.6 bits (51), Expect = 9.7
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +2
Query: 5 CRPICGPASPLLCQSSVP-PTQRCYP-VNPCI 94
C P C PA C + VP TQ P VN CI
Sbjct: 372 CVPSCMPACQPSCTNPVPLTTQAPVPVVNQCI 403
>U80838-7|AAC71112.3| 581|Caenorhabditis elegans Hypothetical
protein F47F6.3 protein.
Length = 581
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/82 (19%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +1
Query: 16 LWTCISAPLPEQRATNTTVLSCKSLHQHIQLLHSNYVTQWTISIVNLKMVRNTHLFC--- 186
L T ++A + + ++ + +L+ K+L + + Y+ W + + L N+++FC
Sbjct: 196 LVTVVTAFIIKLQSESNQILNSKTLSYIGDISYVTYLVHWPVISIFLTSSVNSYVFCIVT 255
Query: 187 KMYSKLVANNLLKFQ*YNYDYK 252
+ + + ++L + Q D+K
Sbjct: 256 TVLASIALHHLFEKQYLQLDFK 277
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 5 CRPICGPASPLLCQSSVPPTQRCYP 79
C+P C PA C + P T +C P
Sbjct: 128 CQPSCMPACEQSCVAPAPVTVQCVP 152
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 5 CRPICGPASPLLCQSSVPPTQRCYP 79
C+P C PA C + P T +C P
Sbjct: 129 CQPSCMPACEQSCVAPAPVTVQCVP 153
>Z81544-6|CAI46607.1| 376|Caenorhabditis elegans Hypothetical
protein F49C5.9 protein.
Length = 376
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 16 LWTCISAPLPEQRATNTTVLSCKSLHQHIQLLHSNY 123
L TC S P P R+ N+T S S+ +HI H NY
Sbjct: 337 LITCTS-PSPHPRSANSTSSSSMSVIEHIMRRH-NY 370
>U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical
protein C43E11.11 protein.
Length = 656
Score = 26.2 bits (55), Expect = 3.2
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 9 VRSVDLHLRSFARAACHQH 65
+ +D+H+ +RA CH H
Sbjct: 483 INHIDMHMAHVSRAVCHSH 501
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 5 CRPICGPASPLLCQSSVPPTQRCYP 79
C P C P+ C S+ P Q+CYP
Sbjct: 306 CLPACMPSCTSSCVQSMCP-QQCYP 329
>U39653-4|AAL56624.1| 649|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform b protein.
Length = 649
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 163 PFLNSL*KSSIALHNLSVTAVYVDARIYRI 74
PFLN L SS+ LH L ++V R+
Sbjct: 351 PFLNKLHTSSVPLHRLPRQTIFVQNSTVRL 380
>Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical
protein F07H5.8 protein.
Length = 872
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 5 CRPICGPASPLLCQSSVPPTQRCYP 79
C P C PA C +V T+ C P
Sbjct: 298 CIPACQPACTPQCVQAVTTTETCIP 322
>Z50794-6|CAA90659.2| 388|Caenorhabditis elegans Hypothetical
protein F59F5.5 protein.
Length = 388
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +2
Query: 5 CRPICGPASPLLCQSSVPPTQRCYPVNPC 91
C+ + G P+ C PP ++C N C
Sbjct: 16 CKTVNGKVDPVNCDCKSPPNEQC-SANAC 43
>U50300-8|AAC48105.1| 646|Caenorhabditis elegans Hypothetical
protein R03H4.6 protein.
Length = 646
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +1
Query: 121 YVTQWTISIVNLKMVRNTHLFC---KMYSKLVANNLLKFQ*YNYDYK 252
Y+ W I ++ L THLFC + + +V +++ + Q D+K
Sbjct: 297 YLVHWPIIVLFLTASLRTHLFCILTILLASVVLHHIFEKQYLRMDWK 343
>U23519-9|ABS19470.1| 203|Caenorhabditis elegans Hypothetical
protein F26G1.11 protein.
Length = 203
Score = 25.4 bits (53), Expect = 5.6
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 188 LQNKCVFLTIFKFTIEIVHCV 126
+QNKC F IF + + +C+
Sbjct: 182 IQNKCYFTHIFLLLVSLFNCI 202
>CU457741-9|CAM36350.2| 252|Caenorhabditis elegans Hypothetical
protein C42C1.9 protein.
Length = 252
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/51 (21%), Positives = 26/51 (50%)
Frame = +1
Query: 67 TVLSCKSLHQHIQLLHSNYVTQWTISIVNLKMVRNTHLFCKMYSKLVANNL 219
T + + + + LHSN V +++ N+ ++++ FC + S+ A +
Sbjct: 115 TAVIVRDIANALLQLHSNQVLHGAVTLENIFLMKDEPSFCLLTSRSHARKM 165
>Z83104-4|CAB05478.2| 582|Caenorhabditis elegans Hypothetical
protein F09B12.3 protein.
Length = 582
Score = 25.0 bits (52), Expect = 7.3
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 133 WTISIVNLKMVRNTHLFCKMYSKLVANNLLKFQ*YNYDYKIKFK 264
W +IV+ ++ R+ +CK+YS L + Q DYK KFK
Sbjct: 334 WIRAIVSNQLARDAREWCKLYS-LYNSGTYNNQWAVLDYK-KFK 375
>AL021491-1|CAA16373.2| 319|Caenorhabditis elegans Hypothetical
protein Y44A6B.1 protein.
Length = 319
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 142 SIVNLKMVRNTHLFCKMYSKLVANNLLKFQ*YN 240
SI ++ +V N +LFC +Y++ N L YN
Sbjct: 10 SIFSVSLVFNLYLFCVIYAQPDKNKLPTVYIYN 42
>AF125450-1|AAD12815.1| 188|Caenorhabditis elegans Hypothetical
protein Y39F10A.1 protein.
Length = 188
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/59 (22%), Positives = 25/59 (42%)
Frame = -3
Query: 179 KCVFLTIFKFTIEIVHCVT*FECNSCIC*CKDLQDSTVVLVARCSGKGAEMQVHRSDDN 3
KC ++F F + C C+S C L D + ++ C+ ++ + DD+
Sbjct: 25 KCFSCSVFTFINSKLVCANPTFCHSDFCYSYLLSDGRSMFLSGCAEDFSDYSIRPHDDH 83
>AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 8 protein.
Length = 445
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +2
Query: 5 CRPICGPASPLLCQSSVPPTQRCYPVNPCIN 97
C P C +CQ + TQ+ Y N +N
Sbjct: 219 CEPACNTQCSDICQQTAQATQQVYNNNQNMN 249
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +2
Query: 5 CRPICGPASPLLCQSSVPPTQRCYP 79
C+P C PA C P +C P
Sbjct: 129 CQPSCMPACEQSCVVQTPAAVQCVP 153
>Z68335-3|CAA92730.2| 540|Caenorhabditis elegans Hypothetical
protein C29F4.2 protein.
Length = 540
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 124 VTQWTISIVNLKMVRNTHLFCKMY 195
+ +W NL M+ N LF MY
Sbjct: 90 INRWMTQFANLGMIDNIALFTSMY 113
>Z35604-3|CAA84679.1| 352|Caenorhabditis elegans Hypothetical
protein ZK1058.3 protein.
Length = 352
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 70 VLSCKSLHQHIQLLHSNYV 126
V+ C ++H H QL SNY+
Sbjct: 158 VVGCSNMHPHGQLWASNYL 176
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,252,811
Number of Sequences: 27780
Number of extensions: 118889
Number of successful extensions: 390
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 12,740,198
effective HSP length: 68
effective length of database: 10,851,158
effective search space used: 227874318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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