Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16c17
         (680 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   2.0  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              22   4.7  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              22   6.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   6.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   6.2  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   8.2  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
 Frame = +3

Query: 81  IYIMSSVKESETCLDDLSDIDITLMTLRKPTDLKKVIDSVPKPVRAVPK-----NGLPMW 245
           +++++     E  +DD  D D  ++   K +D+  +      P+    K     +G  ++
Sbjct: 405 VFVVNKDILHEHNVDDNEDHDENMIIPPKKSDMSNMQSDDGGPLSLKNKVETTHSGTSLF 464

Query: 246 -FRLGLECKLPVPKIPEGKIVFSRGKIGE 329
              LG+EC   + K+   K++ S+  + E
Sbjct: 465 RINLGIECGYEIKKLLRYKLLISQNAVSE 493


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 315 GKIGEDVRRLGLGAECVRPNFDLSDPYCNNV 407
           G I  + +++ L  EC+  NF++ D   NNV
Sbjct: 50  GNIDVEDKKVQLYCECILKNFNILDK--NNV 78


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -2

Query: 172 VGFLSVINVMSISDKSSRQVSDSFTEDIM*IEGN*NKVK*ECLI 41
           +G  +VI V  I      +  D F   I+ +E    ++  ECLI
Sbjct: 24  IGLRAVIPVCRIDSGIDEKKEDDFRNGIIDVENEKVQLFSECLI 67


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 498 RIRETSFDFWLISGQSGVPN 439
           ++++   DFW+    +GVPN
Sbjct: 487 KMQKVLIDFWVSFVNNGVPN 506


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 498 RIRETSFDFWLISGQSGVPN 439
           ++++   DFW+    +GVPN
Sbjct: 487 KMQKVLIDFWVSFVNNGVPN 506


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 234 LPMWFRLGLECKLPVPKIP 290
           L M F LGLE +  +PK+P
Sbjct: 254 LTMTF-LGLEARTDLPKVP 271


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,194
Number of Sequences: 438
Number of extensions: 4369
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)