Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16c15
         (721 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1292|AAF52524.2| 1983|Drosophila melanogaster CG6630-PA...    31   1.2  
AY051765-1|AAK93189.1| 1129|Drosophila melanogaster LD29301p pro...    29   4.8  
AE013599-1923|AAF58230.1| 3257|Drosophila melanogaster CG12864-P...    29   4.8  
AY058454-1|AAL13683.1|  560|Drosophila melanogaster GH24674p pro...    29   8.4  
AE014298-2943|AAN09520.1| 1034|Drosophila melanogaster CG11940-P...    29   8.4  
AE014298-2942|AAF49029.1| 1162|Drosophila melanogaster CG11940-P...    29   8.4  
AE014298-747|AAF46038.2|  560|Drosophila melanogaster CG3239-PA,...    29   8.4  

>AE014134-1292|AAF52524.2| 1983|Drosophila melanogaster CG6630-PA
            protein.
          Length = 1983

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 245  HKTGVSKSEHNIRQIVTVKDVSNALKSISFNPNADS 352
            ++T V   EHN    +  + +SN + ++S N N DS
Sbjct: 1374 YRTSVHMKEHNYLAAIAGQPISNGISNLSLNSNTDS 1409


>AY051765-1|AAK93189.1| 1129|Drosophila melanogaster LD29301p
           protein.
          Length = 1129

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 518 PLNNNDARTNEIIPNEVIVTAKTENKLSKLGTD 616
           P+     R  +IIP E   TA+TEN +  L T+
Sbjct: 517 PVKRKRGRPRKIIPKEEAKTAETENTIESLNTN 549


>AE013599-1923|AAF58230.1| 3257|Drosophila melanogaster CG12864-PA,
           isoform A protein.
          Length = 3257

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 518 PLNNNDARTNEIIPNEVIVTAKTENKLSKLGTD 616
           P+     R  +IIP E   TA+TEN +  L T+
Sbjct: 517 PVKRKRGRPRKIIPKEEAKTAETENTIESLNTN 549


>AY058454-1|AAL13683.1|  560|Drosophila melanogaster GH24674p
           protein.
          Length = 560

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +2

Query: 380 DDPATFVDLKNFMASCFKGISENVVVADIPNVHAVTRIQND 502
           D+P     L+NF  +C K +S++ V+  + ++  +  IQN+
Sbjct: 23  DEPHFLQQLRNFYTACRKPLSQDQVLRILEHLIVMENIQNE 63


>AE014298-2943|AAN09520.1| 1034|Drosophila melanogaster CG11940-PB,
           isoform B protein.
          Length = 1034

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 203 PSSVNELPGSVPTVHKTGVSKSEHNIRQIVTVK-DVSNALKS 325
           P  V +LPGS PT+     S S  + R   T+  DVS+   S
Sbjct: 49  PPGVTQLPGSAPTMVSMSASSSRSHSRTNSTISADVSSCSSS 90


>AE014298-2942|AAF49029.1| 1162|Drosophila melanogaster CG11940-PA,
           isoform A protein.
          Length = 1162

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 203 PSSVNELPGSVPTVHKTGVSKSEHNIRQIVTVK-DVSNALKS 325
           P  V +LPGS PT+     S S  + R   T+  DVS+   S
Sbjct: 177 PPGVTQLPGSAPTMVSMSASSSRSHSRTNSTISADVSSCSSS 218


>AE014298-747|AAF46038.2|  560|Drosophila melanogaster CG3239-PA,
           isoform A protein.
          Length = 560

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +2

Query: 380 DDPATFVDLKNFMASCFKGISENVVVADIPNVHAVTRIQND 502
           D+P     L+NF  +C K +S++ V+  + ++  +  IQN+
Sbjct: 23  DEPHFLQQLRNFYTACRKPLSQDQVLRILEHLIVMENIQNE 63


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,646,796
Number of Sequences: 53049
Number of extensions: 599903
Number of successful extensions: 1603
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1603
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)