Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16c12
(630 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 34 0.36
X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein. 32 1.5
BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein. 32 1.5
BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein. 32 1.5
AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens ... 32 1.5
AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein p... 32 1.5
BC033084-1|AAH33084.1| 1164|Homo sapiens formin homology 2 domai... 30 7.8
AF113615-1|AAD39906.1| 1164|Homo sapiens FH1/FH2 domain-containi... 30 7.8
AB209584-1|BAD92821.1| 1017|Homo sapiens P127 variant protein. 30 7.8
AB041046-1|BAD06250.1| 1164|Homo sapiens p127 protein. 30 7.8
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 34.3 bits (75), Expect = 0.36
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Frame = +3
Query: 324 EYIEDENV-EFPTCCARLRCVVEVNGERIVQTRGQPGELFPDKPWKGQQNEPNPA----V 488
EY E E+V E PT E+NG +GQ GE +P + P PA +
Sbjct: 277 EYKEAESVTEGPTVTEETIAQTEINGHGAYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGI 336
Query: 489 VGMSGIQ-QTPVGGEPQGQASPG 554
+G G+Q T G+P + PG
Sbjct: 337 MGPPGLQGPTGPPGDPGDRGPPG 359
>X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein.
Length = 1028
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 120 VLPALSAEDVSYQACVDKYSRKGYQP 197
VL AL +E + Y V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900
>BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein.
Length = 1028
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 120 VLPALSAEDVSYQACVDKYSRKGYQP 197
VL AL +E + Y V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900
>BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein.
Length = 1028
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 120 VLPALSAEDVSYQACVDKYSRKGYQP 197
VL AL +E + Y V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900
>AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens
cDNA FLJ34146 fis, clone FCBBF3011889, weakly similar to
Drosophila melanogaster La related protein (larp) mRNA.
).
Length = 816
Score = 32.3 bits (70), Expect = 1.5
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +3
Query: 417 RGQPGELFPDKPWKGQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAADGSDIS 596
R +P P K GQQ +P + + G + + +G PG GAA +
Sbjct: 55 RPRPPCAKPHKEGTGQQERESPRPLQLPGAEGPAISDGEEGGGEPGA--GGGAAGAAGAG 112
Query: 597 SRRFIDYPAPQ 629
R F++ P P+
Sbjct: 113 RRDFVEAPPPK 123
>AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein
protein.
Length = 1097
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 120 VLPALSAEDVSYQACVDKYSRKGYQP 197
VL AL +E + Y V KY RKGY+P
Sbjct: 944 VLQALGSEPIQYAVPVVKYDRKGYKP 969
>BC033084-1|AAH33084.1| 1164|Homo sapiens formin homology 2 domain
containing 1 protein.
Length = 1164
Score = 29.9 bits (64), Expect = 7.8
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 423 QPGELFPDKPWKGQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAADGSDISSR 602
+PG P P G + PA+ ++G +PVG QAS +F + A +D SS
Sbjct: 379 EPGPTGPASP-VGPTSSTGPAL--LTGPASSPVGPPSGLQASVNLFPTISVAPSADTSSE 435
Query: 603 RFI 611
R I
Sbjct: 436 RSI 438
>AF113615-1|AAD39906.1| 1164|Homo sapiens FH1/FH2 domain-containing
protein FHOS protein.
Length = 1164
Score = 29.9 bits (64), Expect = 7.8
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 423 QPGELFPDKPWKGQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAADGSDISSR 602
+PG P P G + PA+ ++G +PVG QAS +F + A +D SS
Sbjct: 379 EPGPTGPASP-VGPTSSTGPAL--LTGPASSPVGPPSGLQASVNLFPTISVAPSADTSSE 435
Query: 603 RFI 611
R I
Sbjct: 436 RSI 438
>AB209584-1|BAD92821.1| 1017|Homo sapiens P127 variant protein.
Length = 1017
Score = 29.9 bits (64), Expect = 7.8
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 423 QPGELFPDKPWKGQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAADGSDISSR 602
+PG P P G + PA+ ++G +PVG QAS +F + A +D SS
Sbjct: 232 EPGPTGPASP-VGPTSSTGPAL--LTGPASSPVGPPSGLQASVNLFPTISVAPSADTSSE 288
Query: 603 RFI 611
R I
Sbjct: 289 RSI 291
>AB041046-1|BAD06250.1| 1164|Homo sapiens p127 protein.
Length = 1164
Score = 29.9 bits (64), Expect = 7.8
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 423 QPGELFPDKPWKGQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAADGSDISSR 602
+PG P P G + PA+ ++G +PVG QAS +F + A +D SS
Sbjct: 379 EPGPTGPASP-VGPTSSTGPAL--LTGPASSPVGPPSGLQASVNLFPTISVAPSADTSSE 435
Query: 603 RFI 611
R I
Sbjct: 436 RSI 438
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,182,718
Number of Sequences: 237096
Number of extensions: 2523522
Number of successful extensions: 10846
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10835
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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