Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16c07
(664 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 33 0.14
Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical pr... 29 2.2
U55364-5|AAQ23124.1| 368|Caenorhabditis elegans Prion-like-(q/n... 29 2.2
AF078157-2|AAN84818.1| 176|Caenorhabditis elegans Hypothetical ... 29 2.2
AF078157-1|AAG24071.1| 235|Caenorhabditis elegans Hypothetical ... 29 2.2
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 29 3.9
U29244-5|AAC71090.1| 378|Caenorhabditis elegans Hypothetical pr... 29 3.9
U64601-10|AAP40523.1| 91|Caenorhabditis elegans Hypothetical p... 28 5.1
U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-lik... 28 5.1
Z46343-4|CAA86460.1| 336|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z68315-5|CAE48501.1| 689|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z68315-4|CAA92675.2| 745|Caenorhabditis elegans Hypothetical pr... 27 9.0
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 27 9.0
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +2
Query: 149 NCTTASSPVTTTALSVRAWNTRTKARAPXXXXXXXXXXXXXVGTPWSTATSCGSATDSTL 328
NC + TT S + T T A + T ST S ++TDST
Sbjct: 171 NCNVLTDIPVTTTTSTTSSTTTTTATSTTESTSTSTDSTTTESTTESTTESTSTSTDSTT 230
Query: 329 SESTSPITLDSS 364
+EST+ T +S+
Sbjct: 231 TESTTESTTEST 242
Score = 31.9 bits (69), Expect = 0.42
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +2
Query: 140 SRRNCTTASSPVTTTALSVRAWNTRTKARAPXXXXXXXXXXXXXVGTPWSTATSCGSATD 319
S TTA+S +T+ S + T + + T ST S ++TD
Sbjct: 188 SSTTTTTATSTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTTESTTESTSTSTD 247
Query: 320 STLSESTSPIT 352
ST +ESTS T
Sbjct: 248 STTTESTSTST 258
Score = 27.5 bits (58), Expect = 9.0
Identities = 20/81 (24%), Positives = 35/81 (43%)
Frame = +2
Query: 122 AVLTKNSRRNCTTASSPVTTTALSVRAWNTRTKARAPXXXXXXXXXXXXXVGTPWSTATS 301
A T S T +++ +TT + + +T T + T +T S
Sbjct: 195 ATSTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTTESTTESTS-TSTDSTTTES 253
Query: 302 CGSATDSTLSESTSPITLDSS 364
++TDST +EST+ T +S+
Sbjct: 254 TSTSTDSTTTESTTESTTEST 274
>Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical
protein F53C11.7 protein.
Length = 478
Score = 29.5 bits (63), Expect = 2.2
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +1
Query: 436 PANERLAYGDGKEKNSDLI--SWKFITLW----ENNRVYFKIHNTKYN-QYLKLSSTTDC 594
PA + + D K DL+ S ++ LW +NN + NT +Y ++ D
Sbjct: 204 PATKIMWIPDQKGTFPDLLATSGDYLRLWRIGTDNNACIESLLNTNRTAEYCAPLTSFDW 263
Query: 595 NTQDRVIFGTNTADTTREQWFLQ 663
N D + GT++ DTT W L+
Sbjct: 264 NELDMNLIGTSSIDTTCTVWQLE 286
>U55364-5|AAQ23124.1| 368|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 31,
isoform b protein.
Length = 368
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +1
Query: 43 MKFLVVFASCVLAVSA-GVTEMSAGSMSSSNKELEEKLYNSILTGDYDSAVRQSLEY-EN 216
M+FL + + CVLAV+A + S ++ + Y S + A Q ++Y +N
Sbjct: 1 MQFLTILSVCVLAVAAQQQSAYSTNQQYQPSQGAQYDQYGSSTLQYNNGATAQPIQYNQN 60
Query: 217 QGKGSIIQNVVNNLIIDKSRNTMEYCYKLWVGNGQH 324
Q GS Q N + +N+ +Y + N Q+
Sbjct: 61 QQYGSTAQYNQNQM--QNQQNSNQYSTTSNMNNQQN 94
>AF078157-2|AAN84818.1| 176|Caenorhabditis elegans Hypothetical
protein F25E5.8b protein.
Length = 176
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = -2
Query: 123 AHASRGHF---SDAGADGEHARREHHEKFHY-HSCLF 25
A S G+F S+ G G H EHH K H+ HS F
Sbjct: 25 ASRSTGNFEEGSEEGTSGSHKPEEHHHKEHHGHSLYF 61
>AF078157-1|AAG24071.1| 235|Caenorhabditis elegans Hypothetical
protein F25E5.8a protein.
Length = 235
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = -2
Query: 123 AHASRGHF---SDAGADGEHARREHHEKFHY-HSCLF 25
A S G+F S+ G G H EHH K H+ HS F
Sbjct: 25 ASRSTGNFEEGSEEGTSGSHKPEEHHHKEHHGHSLYF 61
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +2
Query: 131 TKNSRRNCTTASSPVTTTALSVRAWNTRTKARAPXXXXXXXXXXXXXVGTPWSTATSCGS 310
T +S + +T +S VTTT ++ T T P TP +T+T+ +
Sbjct: 276 TTSSTTSTSTTTSVVTTTTVTSTTEPT-TSTSTPTTTTTMQTTTPSTTSTPTTTSTTTTT 334
Query: 311 ATDSTLSESTSPIT 352
+ +T +T P T
Sbjct: 335 SASTTTISTTKPPT 348
>U29244-5|AAC71090.1| 378|Caenorhabditis elegans Hypothetical
protein ZK1248.9 protein.
Length = 378
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +1
Query: 472 EKNSDLISWKFITLWENNRVYFKIHNTKYNQYLKLSSTTDCNTQDRVIFGTNTADTTREQ 651
EKN D K + N + + +T Y + L S DCN +F N ADT ++
Sbjct: 115 EKNPDFFKMK-----DGNHIVYDGQSTLYTT-INLFSELDCNQTKSKVFQINGADTGNDE 168
>U64601-10|AAP40523.1| 91|Caenorhabditis elegans Hypothetical
protein M03F4.7b protein.
Length = 91
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 126 TAHASRGHFSDAGADGEHARREHHEKFHYH 37
TA AS H SD DGEH + + H+K + H
Sbjct: 13 TALASH-HSSDPSKDGEHFKGKEHDKKYDH 41
>U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical
protein M03F4.7a protein.
Length = 314
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 126 TAHASRGHFSDAGADGEHARREHHEKFHYH 37
TA AS H SD DGEH + + H+K + H
Sbjct: 13 TALASH-HSSDPSKDGEHFKGKEHDKKYDH 41
>AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-like
protein protein.
Length = 314
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 126 TAHASRGHFSDAGADGEHARREHHEKFHYH 37
TA AS H SD DGEH + + H+K + H
Sbjct: 13 TALASH-HSSDPSKDGEHFKGKEHDKKYDH 41
>Z46343-4|CAA86460.1| 336|Caenorhabditis elegans Hypothetical
protein T23F11.5 protein.
Length = 336
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = -3
Query: 626 LVPNITRS*VLQSVVELSFKYWLYLVLWILKYTLLFSHKVMNFQLMRSLFFSLPSPYASL 447
L NI+ + + S+ L L+ +I++ TLL + ++NF ++R FS + +
Sbjct: 7 LSSNISYDDPISFECDTSYDSGLELLKYIIQVTLLSINFILNFLIIRVTMFSKNNDFREN 66
Query: 446 SF 441
SF
Sbjct: 67 SF 68
>Z68315-5|CAE48501.1| 689|Caenorhabditis elegans Hypothetical
protein F28C6.4b protein.
Length = 689
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = -3
Query: 662 WRNHCSLVVSAVLVPNITRS*VLQSVVELSFKYWLYLVLWILKYTLLFSHKVMNFQLMRS 483
W H S + + NIT S++E + W YL ++ L + K+ N ++S
Sbjct: 418 WNLHLSKSDFFIFLINITY--FASSLIEEEHEIWYYLGSTVVAIRALRNFKIWNKTEVKS 475
Query: 482 LFF 474
+FF
Sbjct: 476 IFF 478
>Z68315-4|CAA92675.2| 745|Caenorhabditis elegans Hypothetical
protein F28C6.4a protein.
Length = 745
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = -3
Query: 662 WRNHCSLVVSAVLVPNITRS*VLQSVVELSFKYWLYLVLWILKYTLLFSHKVMNFQLMRS 483
W H S + + NIT S++E + W YL ++ L + K+ N ++S
Sbjct: 418 WNLHLSKSDFFIFLINITY--FASSLIEEEHEIWYYLGSTVVAIRALRNFKIWNKTEVKS 475
Query: 482 LFF 474
+FF
Sbjct: 476 IFF 478
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 27.5 bits (58), Expect = 9.0
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 328 QCAVRCRPTACSSTPWCSDSC 266
QC + C+PT + P C C
Sbjct: 225 QCTLECQPTCQQAVPQCQQQC 245
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,631,668
Number of Sequences: 27780
Number of extensions: 280215
Number of successful extensions: 1007
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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