Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16c01
(731 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr... 30 0.39
SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyc... 29 0.52
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 29 0.68
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 28 1.2
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 28 1.6
SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|... 27 2.1
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 27 3.6
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 27 3.6
SPBC1709.12 |rid1||GTPase binding protein Rid1|Schizosaccharomyc... 27 3.6
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 27 3.6
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 27 3.6
SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces... 26 4.8
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 26 4.8
SPAC6G9.02c |nop9||RNA-binding protein Nop9|Schizosaccharomyces ... 26 6.4
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 26 6.4
SPBC25H2.06c |hrf1||COPII-coated vesicle component Hrf1 |Schizos... 25 8.4
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 25 8.4
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 25 8.4
SPBC543.10 |||GET complex subunit |Schizosaccharomyces pombe|chr... 25 8.4
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 25 8.4
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 25 8.4
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 25 8.4
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 25 8.4
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 25 8.4
>SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 905
Score = 29.9 bits (64), Expect = 0.39
Identities = 22/79 (27%), Positives = 41/79 (51%)
Frame = +1
Query: 472 TQASNILKSMEELYDKIEKSQTDKFLDAEDLFTTESIANIKRVNPEKIDKVITNNVQMQA 651
++AS + E+L K++ Q KFL + L E + VNPE+ ++ + ++
Sbjct: 29 SRASYVTPPYEKLMGKLQ--QVRKFLPGQKLTLAEKVLYSHLVNPEESFSGVSPS-DIRG 85
Query: 652 FLYNKLNCPEKYVLYNHTA 708
LY KLN P++ + + +A
Sbjct: 86 SLYLKLN-PDRVAMQDASA 103
>SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 164
Score = 29.5 bits (63), Expect = 0.52
Identities = 18/66 (27%), Positives = 35/66 (53%)
Frame = +1
Query: 427 VQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDLFTTESIANIKRVNP 606
++ L+ Y + + N+L +E ++EK QTD+ E++ E+ + I+R+
Sbjct: 95 LETLVEKYNLHMSGIENLENVLLEQKEQLQQLEKRQTDQVSARENILQRET-SEIQRLER 153
Query: 607 EKIDKV 624
E I+KV
Sbjct: 154 E-IEKV 158
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 29.1 bits (62), Expect = 0.68
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 15/198 (7%)
Frame = +1
Query: 121 ETLDRITTTFENVRNVIKNKSSMERLQSLKKDMHTLGMELVALGKENHDQYVRSLAMDAY 300
E D I + N N K++ L SL EL AL D Y + L + ++
Sbjct: 854 EYFDTIASNL-NSPNADVMKAAAIALGSLTSQSEKFIKELCALYVS--DAYDKELLLISF 910
Query: 301 LSLLSAKTMPCSLVEKK-NILQVAFDKLKPYA------IREECLFILLKVQNLLCYYLIQ 459
L+ L + +K +IL + +K ++ + ECL +L+ ++ YY ++
Sbjct: 911 LTFLKKSKIDYETADKIWDILSKDIENIKDFSTSPFRTLLSECLGLLICNESSSLYYKLE 970
Query: 460 LDQFTQASN-ILKSMEEL-------YDKIEKSQTDKFLDAEDLFTTESIANIKRVNPEKI 615
L ++ASN +L S+ K++ + F A LF + + + + I
Sbjct: 971 LLSSSEASNHMLLSLSVFRFSLTLDCPKLKAYEKQFFEKAYKLFQNPDL-EVSQETLQVI 1029
Query: 616 DKVITNNVQMQAFLYNKL 669
VI N A +YN+L
Sbjct: 1030 ISVIKNRRSCIADVYNEL 1047
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 28.3 bits (60), Expect = 1.2
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Frame = +1
Query: 106 FKSVMETLDRITTTFENVRNVIKNKSSMERLQSLKKDMHTLGMELVALGKENHDQYVRSL 285
F V ETL + + + N + ++++ LKK+ ME GKE ++ V +L
Sbjct: 93 FFRVYETLGEVPDPYPLLIEAANNLKTQKQIEDLKKEKEE--MEGSLQGKEKLEREVENL 150
Query: 286 --AMDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREE 405
+D Y L+ + + + K+ + ++ K Y E+
Sbjct: 151 RKELDKYKDLVETEAEKRAAITKEECEKSWLEQQKLYKDMEQ 192
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 27.9 bits (59), Expect = 1.6
Identities = 26/106 (24%), Positives = 48/106 (45%)
Frame = +1
Query: 352 NILQVAFDKLKPYAIREECLFILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKS 531
+ILQ+ + + + EC +LL+++N+L L+Q + S+ L S + Y
Sbjct: 1988 DILQLLKENKQMSSQLHECFQLLLEIRNVL-LSLLQSHKQLDLSDDLASFRKYYILELLK 2046
Query: 532 QTDKFLDAEDLFTTESIANIKRVNPEKIDKVITNNVQMQAFLYNKL 669
++ FL ++L S+A + K D N FL +K+
Sbjct: 2047 ISESFLIVDNLQNAFSVAMLSDALYRKFDLADENLKHDIDFLSSKI 2092
>SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 664
Score = 27.5 bits (58), Expect = 2.1
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -3
Query: 690 YIFFRTIQFVIQKCLHLDVVCNDFVNFFWIHTF 592
Y F+R ++I + V + +FFW+H++
Sbjct: 298 YFFYRHNNYIISDSSNTREVLRRYSDFFWLHSY 330
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 26.6 bits (56), Expect = 3.6
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Frame = +1
Query: 130 DRITTTFENVRNVIKNKSSMERLQSLKK--DMHT----LGMELVALGKENHDQYVRSLAM 291
DR+T TFE RN + + +L S D HT L M +L K Y +S
Sbjct: 124 DRLTKTFEGFRNQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEIS 183
Query: 292 DAYLSLLSAKTMPCSLVEKKNILQ 363
+ Y L +T K+ LQ
Sbjct: 184 EIYDFLEDKRTASYGKTHKRFQLQ 207
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 26.6 bits (56), Expect = 3.6
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Frame = +1
Query: 130 DRITTTFENVRNVIKNKSSMERLQSLKK--DMHT----LGMELVALGKENHDQYVRSLAM 291
DR+T TFE RN + + +L S D HT L M +L K Y +S
Sbjct: 124 DRLTKTFEGFRNQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEIS 183
Query: 292 DAYLSLLSAKTMPCSLVEKKNILQ 363
+ Y L +T K+ LQ
Sbjct: 184 EIYDFLEDKRTASYGKTHKRFQLQ 207
>SPBC1709.12 |rid1||GTPase binding protein Rid1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 367
Score = 26.6 bits (56), Expect = 3.6
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 289 MDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREE 405
++ +SLL +K PC V ++ ++Q+ K + +EE
Sbjct: 202 VERLISLLLSKKQPCDFVVREVLVQIVHSFYKAHLDKEE 240
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 26.6 bits (56), Expect = 3.6
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Frame = +1
Query: 130 DRITTTFENVRNVIKNKSSMERLQSLKK--DMHT----LGMELVALGKENHDQYVRSLAM 291
DR+T TFE RN + + +L S D HT L M +L K Y +S
Sbjct: 124 DRLTKTFEGFRNQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEIS 183
Query: 292 DAYLSLLSAKTMPCSLVEKKNILQ 363
+ Y L +T K+ LQ
Sbjct: 184 EIYDFLEDKRTASYGKTHKRFQLQ 207
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 26.6 bits (56), Expect = 3.6
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Frame = +1
Query: 130 DRITTTFENVRNVIKNKSSMERLQSLKK--DMHT----LGMELVALGKENHDQYVRSLAM 291
DR+T TFE RN + + +L S D HT L M +L K Y +S
Sbjct: 124 DRLTKTFEGFRNQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEIS 183
Query: 292 DAYLSLLSAKTMPCSLVEKKNILQ 363
+ Y L +T K+ LQ
Sbjct: 184 EIYDFLEDKRTASYGKTHKRFQLQ 207
>SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1441
Score = 26.2 bits (55), Expect = 4.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -2
Query: 406 ILLGLRMVLICRTQLEGYSFFLRESKA*FWRKEEI 302
+L G+RMV IC T L Y LR ++ + K++I
Sbjct: 627 LLSGMRMVQICPTSLRVYDSNLRLTQLFNFSKKQI 661
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 26.2 bits (55), Expect = 4.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 339 RRKKEYPSSCVRQIKTIRNPRRMSIYFIESSKSAL 443
RR +E+ ++ I+ IRN I+ +ES SAL
Sbjct: 391 RRHEEHSQKLLKFIEEIRNDYEERIHALESQNSAL 425
>SPAC6G9.02c |nop9||RNA-binding protein Nop9|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 655
Score = 25.8 bits (54), Expect = 6.4
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +1
Query: 448 YLIQLDQFTQASNILKS-MEELYDKIEKSQTDKFLDAEDL-FTTESIANIKRVNPEKIDK 621
+L L + SN L ++++ I+ S T+ DA + S + NPE ++
Sbjct: 399 FLPVLRTLLEKSNHLHCYQDDIFSMIQTSVTNSGKDANIIPCLLRSKHKRDKANPENKER 458
Query: 622 VITNNVQMQAFLYNKLNCPEKYV 690
+ NN+ L L+C ++++
Sbjct: 459 KLVNNLLGAQLLEEMLHCEKQHI 481
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 25.8 bits (54), Expect = 6.4
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 412 FILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDLFTTESI 582
+I K +L+C YL+ ++ A I ++ +Y + ++ ++ L A DL TE I
Sbjct: 363 YIERKTTSLVCLYLLGVESLAPALRIPTALPPVYSRHQRHHSE-ILGAMDL--TEKI 416
>SPBC25H2.06c |hrf1||COPII-coated vesicle component Hrf1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 25.4 bits (53), Expect = 8.4
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 602 IQKKLTKSLQTTSRCKHFCITN*IVLKNMYFTIIPLYEGSW 724
+++ K L TT +F +TN V+ + I P SW
Sbjct: 72 VEQNFGKWLSTTRLHHYFTVTNSYVVAKLLLIIFPWRRRSW 112
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 8.4
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Frame = +1
Query: 130 DRITTTFENVRNVIKNKSSMERLQSLKK--DMHT----LGMELVALGKENHDQYVRSLAM 291
DR+T TFE RN + + +L S D HT L M +L K Y +S
Sbjct: 124 DRLTKTFEGFRNQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEIS 183
Query: 292 DAYLSLLSAKTMPCSLVEKK 351
+ Y L +T K+
Sbjct: 184 EIYDFLEDKRTASYGKTHKR 203
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 8.4
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Frame = +1
Query: 130 DRITTTFENVRNVIKNKSSMERLQSLKK--DMHT----LGMELVALGKENHDQYVRSLAM 291
DR+T TFE RN + + +L S D HT L M +L K Y +S
Sbjct: 124 DRLTKTFEGFRNQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEIS 183
Query: 292 DAYLSLLSAKTMPCSLVEKK 351
+ Y L +T K+
Sbjct: 184 EIYDFLEDKRTASYGKTHKR 203
>SPBC543.10 |||GET complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 171
Score = 25.4 bits (53), Expect = 8.4
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +1
Query: 109 KSVMETLDRITTTFENVRNVIKNKSSMERLQSLKKDMH 222
K ++ RI + N +++ KNK +E+L ++KK+++
Sbjct: 24 KRTIDGAYRIYVSVSNNKDLKKNKEILEQLLTVKKELN 61
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 8.4
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Frame = +1
Query: 130 DRITTTFENVRNVIKNKSSMERLQSLKK--DMHT----LGMELVALGKENHDQYVRSLAM 291
DR+T TFE RN + + +L S D HT L M +L K Y +S
Sbjct: 124 DRLTKTFEGFRNQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEIS 183
Query: 292 DAYLSLLSAKTMPCSLVEKK 351
+ Y L +T K+
Sbjct: 184 EIYDFLEDKRTASYGKTHKR 203
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 8.4
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Frame = +1
Query: 130 DRITTTFENVRNVIKNKSSMERLQSLKK--DMHT----LGMELVALGKENHDQYVRSLAM 291
DR+T TFE RN + + +L S D HT L M +L K Y +S
Sbjct: 124 DRLTKTFEGFRNQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEIS 183
Query: 292 DAYLSLLSAKTMPCSLVEKK 351
+ Y L +T K+
Sbjct: 184 EIYDFLEDKRTASYGKTHKR 203
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 8.4
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Frame = +1
Query: 130 DRITTTFENVRNVIKNKSSMERLQSLKK--DMHT----LGMELVALGKENHDQYVRSLAM 291
DR+T TFE RN + + +L S D HT L M +L K Y +S
Sbjct: 124 DRLTKTFEGFRNQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEIS 183
Query: 292 DAYLSLLSAKTMPCSLVEKK 351
+ Y L +T K+
Sbjct: 184 EIYDFLEDKRTASYGKTHKR 203
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 8.4
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Frame = +1
Query: 130 DRITTTFENVRNVIKNKSSMERLQSLKK--DMHT----LGMELVALGKENHDQYVRSLAM 291
DR+T TFE RN + + +L S D HT L M +L K Y +S
Sbjct: 124 DRLTKTFEGFRNQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEIS 183
Query: 292 DAYLSLLSAKTMPCSLVEKK 351
+ Y L +T K+
Sbjct: 184 EIYDFLEDKRTASYGKTHKR 203
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 8.4
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Frame = +1
Query: 130 DRITTTFENVRNVIKNKSSMERLQSLKK--DMHT----LGMELVALGKENHDQYVRSLAM 291
DR+T TFE RN + + +L S D HT L M +L K Y +S
Sbjct: 124 DRLTKTFEGFRNQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEIS 183
Query: 292 DAYLSLLSAKTMPCSLVEKK 351
+ Y L +T K+
Sbjct: 184 EIYDFLEDKRTASYGKTHKR 203
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,975,922
Number of Sequences: 5004
Number of extensions: 60519
Number of successful extensions: 170
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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