Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16c01
         (731 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   3.9  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.2  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   5.2  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   5.2  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 385 PYAIREECLFILLKVQNLLCYYLIQLDQFTQASNILKS 498
           PY  R E L  + ++ NL+     ++   T A N LK+
Sbjct: 470 PYTQRVEILDSVDRLDNLMAQVNTEMTHLTNAVNKLKT 507


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/44 (22%), Positives = 22/44 (50%)
 Frame = +1

Query: 88  KINFKCFKSVMETLDRITTTFENVRNVIKNKSSMERLQSLKKDM 219
           ++NF        T+D++ T F++  +++ N  S++     K  M
Sbjct: 442 ELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTM 485


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/44 (22%), Positives = 22/44 (50%)
 Frame = +1

Query: 88  KINFKCFKSVMETLDRITTTFENVRNVIKNKSSMERLQSLKKDM 219
           ++NF        T+D++ T F++  +++ N  S++     K  M
Sbjct: 442 ELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTM 485


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/44 (22%), Positives = 22/44 (50%)
 Frame = +1

Query: 88  KINFKCFKSVMETLDRITTTFENVRNVIKNKSSMERLQSLKKDM 219
           ++NF        T+D++ T F++  +++ N  S++     K  M
Sbjct: 68  ELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTM 111


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 541 KFLDAEDLFTTESIANIKRVN 603
           ++   +D+F TESIA I   N
Sbjct: 295 QYQGVQDIFNTESIAKIMSKN 315


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,220
Number of Sequences: 438
Number of extensions: 4544
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)