Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16b22
(681 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF063608-1|ABN79919.1| 139|Homo sapiens heparan sulfate 3-O-sul... 30 6.6
EF063607-1|ABN79918.1| 139|Homo sapiens heparan sulfate 3-O-sul... 30 6.6
EF063606-1|ABN79917.1| 139|Homo sapiens heparan sulfate 3-O-sul... 30 6.6
EF063605-1|ABN79916.1| 139|Homo sapiens heparan sulfate 3-O-sul... 30 6.6
EF063604-1|ABN79915.1| 139|Homo sapiens heparan sulfate 3-O-sul... 30 6.6
EF063603-1|ABN79914.1| 139|Homo sapiens heparan sulfate 3-O-sul... 30 6.6
EF063602-1|ABN79913.1| 139|Homo sapiens heparan sulfate 3-O-sul... 30 6.6
EF063601-1|ABN79912.1| 139|Homo sapiens heparan sulfate 3-O-sul... 30 6.6
AL834283-1|CAD38957.1| 335|Homo sapiens hypothetical protein pr... 30 6.6
AF105378-1|AAD30210.2| 456|Homo sapiens heparan sulfate 3-O-sul... 30 6.6
>EF063608-1|ABN79919.1| 139|Homo sapiens heparan sulfate
3-O-sulfotransferase 4 protein.
Length = 139
Score = 30.3 bits (65), Expect = 6.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 487 LPETPKYFICIRITKRKHSEKKEVIIVLVVSYTIT 591
+ +TP YF+ KR HS K++ +++VV +T
Sbjct: 79 MEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVT 113
>EF063607-1|ABN79918.1| 139|Homo sapiens heparan sulfate
3-O-sulfotransferase 4 protein.
Length = 139
Score = 30.3 bits (65), Expect = 6.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 487 LPETPKYFICIRITKRKHSEKKEVIIVLVVSYTIT 591
+ +TP YF+ KR HS K++ +++VV +T
Sbjct: 79 MEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVT 113
>EF063606-1|ABN79917.1| 139|Homo sapiens heparan sulfate
3-O-sulfotransferase 4 protein.
Length = 139
Score = 30.3 bits (65), Expect = 6.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 487 LPETPKYFICIRITKRKHSEKKEVIIVLVVSYTIT 591
+ +TP YF+ KR HS K++ +++VV +T
Sbjct: 79 MEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVT 113
>EF063605-1|ABN79916.1| 139|Homo sapiens heparan sulfate
3-O-sulfotransferase 4 protein.
Length = 139
Score = 30.3 bits (65), Expect = 6.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 487 LPETPKYFICIRITKRKHSEKKEVIIVLVVSYTIT 591
+ +TP YF+ KR HS K++ +++VV +T
Sbjct: 79 MEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVT 113
>EF063604-1|ABN79915.1| 139|Homo sapiens heparan sulfate
3-O-sulfotransferase 4 protein.
Length = 139
Score = 30.3 bits (65), Expect = 6.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 487 LPETPKYFICIRITKRKHSEKKEVIIVLVVSYTIT 591
+ +TP YF+ KR HS K++ +++VV +T
Sbjct: 79 MEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVT 113
>EF063603-1|ABN79914.1| 139|Homo sapiens heparan sulfate
3-O-sulfotransferase 4 protein.
Length = 139
Score = 30.3 bits (65), Expect = 6.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 487 LPETPKYFICIRITKRKHSEKKEVIIVLVVSYTIT 591
+ +TP YF+ KR HS K++ +++VV +T
Sbjct: 79 MEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVT 113
>EF063602-1|ABN79913.1| 139|Homo sapiens heparan sulfate
3-O-sulfotransferase 4 protein.
Length = 139
Score = 30.3 bits (65), Expect = 6.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 487 LPETPKYFICIRITKRKHSEKKEVIIVLVVSYTIT 591
+ +TP YF+ KR HS K++ +++VV +T
Sbjct: 79 MEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVT 113
>EF063601-1|ABN79912.1| 139|Homo sapiens heparan sulfate
3-O-sulfotransferase 4 protein.
Length = 139
Score = 30.3 bits (65), Expect = 6.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 487 LPETPKYFICIRITKRKHSEKKEVIIVLVVSYTIT 591
+ +TP YF+ KR HS K++ +++VV +T
Sbjct: 79 MEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVT 113
>AL834283-1|CAD38957.1| 335|Homo sapiens hypothetical protein
protein.
Length = 335
Score = 30.3 bits (65), Expect = 6.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 487 LPETPKYFICIRITKRKHSEKKEVIIVLVVSYTIT 591
+ +TP YF+ KR HS K++ +++VV +T
Sbjct: 137 MEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVT 171
>AF105378-1|AAD30210.2| 456|Homo sapiens heparan sulfate
3-O-sulfotransferase-4 protein.
Length = 456
Score = 30.3 bits (65), Expect = 6.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 487 LPETPKYFICIRITKRKHSEKKEVIIVLVVSYTIT 591
+ +TP YF+ KR HS K++ +++VV +T
Sbjct: 258 MEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVT 292
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,247,971
Number of Sequences: 237096
Number of extensions: 1391079
Number of successful extensions: 2640
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2640
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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