Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16b15
(639 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 29 0.75
SPAC821.10c |sod1||superoxide dismutase Sod1|Schizosaccharomyces... 28 0.99
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 0.99
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.3
SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|ch... 28 1.3
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 28 1.3
SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces ... 27 2.3
SPCC162.09c |hmg1||3-hydroxy-3-methylglutaryl-CoA reductase|Schi... 27 2.3
SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces po... 27 3.0
SPAC9E9.03 |leu2||3-isopropylmalate dehydratase Leu2 |Schizosacc... 27 3.0
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 26 4.0
SPAC3G6.03c |||Maf-like protein|Schizosaccharomyces pombe|chr 1|... 26 4.0
SPCC1795.09 |yps1||aspartic protease Yps1|Schizosaccharomyces po... 26 5.3
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 26 5.3
SPAC869.04 |||formamidase-like protein|Schizosaccharomyces pombe... 26 5.3
SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity fac... 25 7.0
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 25 7.0
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 25 9.2
SPAC1B3.20 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 9.2
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 28.7 bits (61), Expect = 0.75
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 367 WSETMATADCVSPKPWITAGLPVTEPTTS-RTFALGSTVSTTKAPSLKPTSLIPS 206
W++ ++A +P PW P + P S +L T+ +++P++L+PS
Sbjct: 426 WAKPASSAAPSNPAPWQQPAAPQSAPALSMNPSSLPPWQQPTQQSAVQPSNLVPS 480
>SPAC821.10c |sod1||superoxide dismutase Sod1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 154
Score = 28.3 bits (60), Expect = 0.99
Identities = 13/58 (22%), Positives = 31/58 (53%)
Frame = +3
Query: 345 AVAMVSDQSCCNKILGVVRLQQTAEGPLVADGSIDGLSPGRHGLHVYESGDLSQGCNS 518
AVA++ S + ++ ++ Q ++ ++ D + + + G H+++ GD + GC S
Sbjct: 4 AVAVLRGDSKVSGVVTFEQVDQNSQVSVIVD-LVGNDANAKRGFHIHQFGDNTNGCTS 60
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 28.3 bits (60), Expect = 0.99
Identities = 24/94 (25%), Positives = 42/94 (44%)
Frame = -3
Query: 496 SPDSYTWSPCLPGLSPSMLPSATSGPSAVCCSLTTPRILLQHDWSETMATADCVSPKPWI 317
S Y S LP +PS P +++ + + +TP + + T T+ +P +
Sbjct: 272 SSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSV----NSTTTTSASSTPLSSV 327
Query: 316 TAGLPVTEPTTSRTFALGSTVSTTKAPSLKPTSL 215
++ T +TS T S+V++T A S T L
Sbjct: 328 SSANSTTATSTSSTPL--SSVNSTTATSASSTPL 359
Score = 25.8 bits (54), Expect = 5.3
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -3
Query: 448 SMLPSATSGPSAVCCSLTTPRILLQHDWSETMATADCVSPKPWITAGLPVTEPTTSRTFA 269
S L S+++ S++ S TT L S ++ ++ S IT+ + TTS + A
Sbjct: 107 SSLTSSSATSSSLASSSTTSSSLA----SSSITSSSLASSS--ITSSSLASSSTTSSSLA 160
Query: 268 LGSTVSTTKA-PSLKPTS 218
ST STT A P+ TS
Sbjct: 161 SSSTNSTTSATPTSSATS 178
Score = 25.8 bits (54), Expect = 5.3
Identities = 29/116 (25%), Positives = 53/116 (45%)
Frame = -3
Query: 457 LSPSMLPSATSGPSAVCCSLTTPRILLQHDWSETMATADCVSPKPWITAGLPVTEPTTSR 278
L+ + +ATS + S +TP + T A+A S + ++ LP + P+++
Sbjct: 232 LNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTP 291
Query: 277 TFALGSTVSTTKAPSLKPTSLIPS*VFNVLIVFSRNWSSTDESKFTRTSSLVVSIV 110
+ ST +T+ A S TS+ + + + SS + + T TSS +S V
Sbjct: 292 LSSANSTTATS-ASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSV 346
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.9 bits (59), Expect = 1.3
Identities = 33/129 (25%), Positives = 64/129 (49%)
Frame = -3
Query: 496 SPDSYTWSPCLPGLSPSMLPSATSGPSAVCCSLTTPRILLQHDWSETMATADCVSPKPWI 317
SP S ++P S + PS+ S SA+ S T+ + + S +++++D ++ +
Sbjct: 122 SPTSSEYTPSSTESSSLLDPSSVS--SAILPSSTSVEVSIS---SSSLSSSDPLTSSTFS 176
Query: 316 TAGLPVTEPTTSRTFALGSTVSTTKAPSLKPTSLIPS*VFNVLIVFSRNWSSTDESKFTR 137
+ ++ T+S ++ ST S+T + S PTS S + + +V S + S+ S
Sbjct: 177 S----LSSSTSSSQPSVSSTSSSTFS-SAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLT 231
Query: 136 TSSLVVSIV 110
+SSL S +
Sbjct: 232 SSSLSTSSI 240
>SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 891
Score = 27.9 bits (59), Expect = 1.3
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = -2
Query: 287 HVQNVRAWEHRLHDKSTVLETHLLDSVVS--FQCLNSLLE 174
H Q + ++HR+++ ST + LL S+V+ Q LNS ++
Sbjct: 142 HYQVISFFKHRIYEASTQHDPELLSSLVTMHIQYLNSTIQ 181
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 27.9 bits (59), Expect = 1.3
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = -3
Query: 496 SPDSYTWSPCLPGLSPSMLPSATSGPSAVCCSLTTPRIL-LQHDWSETMATADCVSPKPW 320
SP S ++SP P SP+ S + P++ S T+P +S T + SP
Sbjct: 1579 SPTSPSYSPTSPSYSPT---SPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYS 1635
Query: 319 ITAGLPVTEPTTSRTFALGSTVSTTKAPSLKPTS 218
T+ P P TS +++ S + +PS PTS
Sbjct: 1636 PTS--PSYSP-TSPSYSPTSPSYSPTSPSYSPTS 1666
Score = 27.1 bits (57), Expect = 2.3
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Frame = -3
Query: 496 SPDSYTWSPCLPGLSP-SMLPSATS---GPSAVCCSLTTPRIL-LQHDWSETMATADCVS 332
SP S ++SP P SP S SATS P++ S T+P +S T + S
Sbjct: 1586 SPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1645
Query: 331 PKPWITAGLPVTEPTTSRTFALGSTVSTTKAPSLKPTS 218
P T+ P P TS +++ S + +PS PTS
Sbjct: 1646 PSYSPTS--PSYSP-TSPSYSPTSPSYSPTSPSYSPTS 1680
Score = 27.1 bits (57), Expect = 2.3
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = -3
Query: 496 SPDSYTWSPCLPGLSPSMLPSATSGPSAVCCSLTTPRIL-LQHDWSETMATADCVSPKPW 320
SP S ++SP P SP+ S + P++ S T+P +S T + SP
Sbjct: 1656 SPTSPSYSPTSPSYSPT---SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1712
Query: 319 ITAGLPVTEPTTSRTFALGSTVSTTKAPSLKPTS 218
T+ P P TS +++ S + +PS PTS
Sbjct: 1713 PTS--PSYSP-TSPSYSPTSPSYSPTSPSYSPTS 1743
Score = 26.2 bits (55), Expect = 4.0
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -3
Query: 493 PDSYTWSPCLPGLSPSMLPSATSGPSAVCCSLTTPRI-LLQHDWSETMATADCVSPKPWI 317
P S ++SP P SP+ S + P++ S T+P +S T + SP
Sbjct: 1573 PSSPSYSPTSPSYSPT---SPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSP 1629
Query: 316 TAGLPVTEPTTSRTFALGSTVSTTKAPSLKPTS 218
T+ P P TS +++ S + +PS PTS
Sbjct: 1630 TS--PSYSP-TSPSYSPTSPSYSPTSPSYSPTS 1659
>SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 27.1 bits (57), Expect = 2.3
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = -3
Query: 436 SATSGPSAVCCSLTTPRILLQHDWSETMATADCVSPKPWITAGLPVTEPTTSRTFAL 266
S TS PS C L PRIL + ++ CV WI + L E + L
Sbjct: 689 SITSNPSK-CTHLIAPRILRTSKFLCSIPYGPCVVTMDWINSCLKTHEIVDEEPYLL 744
>SPCC162.09c |hmg1||3-hydroxy-3-methylglutaryl-CoA
reductase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1053
Score = 27.1 bits (57), Expect = 2.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 369 SCCNKILGVVRLQQTAEGPLVADG 440
+CC ++G + L GPL+ DG
Sbjct: 678 ACCENVIGYMPLPLGVAGPLIIDG 701
>SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1564
Score = 26.6 bits (56), Expect = 3.0
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = -2
Query: 191 LNSLLEELVINR*IEVHQDL-*LSSQHRCL 105
L+ L E+ VIN IEV+ D+ L+S H+C+
Sbjct: 1343 LSQLFEKAVINPTIEVYGDIVLLNSLHKCI 1372
>SPAC9E9.03 |leu2||3-isopropylmalate dehydratase Leu2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 26.6 bits (56), Expect = 3.0
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 273 NVLDVVGSVTGRPAVIQGFGETQSAVAMVSDQSCCN 380
+++ V+G+ G +VI+ GE ++M + S CN
Sbjct: 198 HIIGVIGTAGGTGSVIEFCGEAIEGLSMEARMSMCN 233
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 26.2 bits (55), Expect = 4.0
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = -3
Query: 337 VSPKPWITAGLPVTEPTTSRTFALGSTVSTTKAPS-LKPTSLIPS*VFNVLIVFSRNWSS 161
+ P ++ T TTS + + ST T+ +PS + T+ IPS + S SS
Sbjct: 108 IDPSSSSSSAASSTTSTTSSSSLVSSTTLTSSSPSAVSSTTSIPS-------ISSTISSS 160
Query: 160 TDESKFTRTSSLVVSIVV 107
S FT SS S V+
Sbjct: 161 VSTSSFTSLSSSGFSTVL 178
>SPAC3G6.03c |||Maf-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 26.2 bits (55), Expect = 4.0
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 114 MLTTKLEVLVNFDSSVDDQFLEKTIKTLKTHDGIKEVGFK-DGAFVVETVL 263
M T E V FD S+ D+FLE ++ + D + GA ++E+++
Sbjct: 155 MKTHLEETQVKFDPSITDEFLEAYVRCGEGSDKAGGYAIQGHGALLIESII 205
>SPCC1795.09 |yps1||aspartic protease Yps1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 521
Score = 25.8 bits (54), Expect = 5.3
Identities = 9/30 (30%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 50 YFKCVQTYVYIPEDI-FNITNNDADY*ARG 136
YF+ +TY+Y+P ++ +++ +N Y + G
Sbjct: 303 YFQTRETYIYLPAELAYSVMDNAGAYLSEG 332
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 25.8 bits (54), Expect = 5.3
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 7/49 (14%)
Frame = -2
Query: 482 YVEPVPPGA*SVD-AAVSHQR---ALG-RLLQP--DHAQDLIAARLVRD 357
Y EP PPG+ D A+VS +R +LG R L P D D+ + RL RD
Sbjct: 866 YREPTPPGSSDSDTASVSKKRVDFSLGTRHLMPAFDDVADIGSKRLGRD 914
>SPAC869.04 |||formamidase-like protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 410
Score = 25.8 bits (54), Expect = 5.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 561 APRAVPPTDYNAPLWNCSPDLNPRTH 484
APR + D N P W P+L+ R H
Sbjct: 2 APRTIVKVDLNKPAWE-QPNLHNRWH 26
>SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity factor
complex subunit, Fip1 homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 25.4 bits (53), Expect = 7.0
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -3
Query: 430 TSGPSAVCCSLTTPRILLQHDWSETMATADCVSPKPWIT--AGLPVTEPTTSRTFALGST 257
TSG V TP + ++ S + ++ + P IT AG+ +PT + T + G+
Sbjct: 236 TSG-GGVHSGAATPNAYVNNNPSSSRRESESPANSPNITSSAGMTHAQPTHNPTSSYGNG 294
Query: 256 VSTTKAPSLKPTS 218
ST S P++
Sbjct: 295 ASTNYNASRPPSN 307
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 25.4 bits (53), Expect = 7.0
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -2
Query: 632 SSAVCVGCNVSEIAGVPPIRGIAGPPVRSPRRI 534
S V CNVSE V I GIA V+ RI
Sbjct: 725 SVVAAVACNVSEGDPVTRITGIANQRVKECNRI 757
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.0 bits (52), Expect = 9.2
Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 1/87 (1%)
Frame = -3
Query: 472 PCLPGLS-PSMLPSATSGPSAVCCSLTTPRILLQHDWSETMATADCVSPKPWITAGLPVT 296
P +P + PSM+PS P + T P L S P P + ++
Sbjct: 1487 PAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPSPAPPAPQHPSAAALS 1546
Query: 295 EPTTSRTFALGSTVSTTKAPSLKPTSL 215
+ S+ + P KP ++
Sbjct: 1547 SAPADNSMPHRSSPYAPQEPVQKPQAI 1573
>SPAC1B3.20 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 78
Score = 25.0 bits (52), Expect = 9.2
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2
Query: 602 SEIAGVPPIRGIAGPPVRSPR 540
+E G+PP+RG AG PV +PR
Sbjct: 31 TESHGMPPLRGPAGFPV-NPR 50
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,369,260
Number of Sequences: 5004
Number of extensions: 46728
Number of successful extensions: 197
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 285732116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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