Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16b14
         (384 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    25   0.40 
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    24   0.70 
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    24   0.70 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   3.7  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   4.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   4.9  

>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 24.6 bits (51), Expect = 0.40
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 112 CTHFFLEPFLIKHLLTVAHYSIPTSGKHYVMNP 14
           CT FFL   LI         SI  + K +V+ P
Sbjct: 7   CTFFFLSVILITSYFVTPTMSIKCNCKRHVIKP 39


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 0.70
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 241 TEGALTTSAFQFATPD 288
           TEG LTT +F F T D
Sbjct: 199 TEGFLTTCSFDFLTDD 214


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 0.70
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 241 TEGALTTSAFQFATPD 288
           TEG LTT +F F T D
Sbjct: 199 TEGFLTTCSFDFLTDD 214



 Score = 20.6 bits (41), Expect = 6.5
 Identities = 9/47 (19%), Positives = 19/47 (40%)
 Frame = -2

Query: 167 LHPHNKQHQRPKIHNMLKLYTFFLRTVFNQTFTDCCALFYSHIGQTL 27
           +HPH +    P  H  + L   +   +      +CC ++     ++L
Sbjct: 42  VHPHWRAFPAPGKHFHIGLAIIYSMLLIMSLVGNCCVIWIFSTSKSL 88


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 158 HNKQHQRPKIHNMLKLYTF 102
           HN Q  +  IHN   ++TF
Sbjct: 577 HNAQVNKRSIHNNYPVHTF 595


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 190 GMRSPGFGCT 161
           GMR+P F CT
Sbjct: 114 GMRAPSFRCT 123


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 190 GMRSPGFGCT 161
           GMR+P F CT
Sbjct: 114 GMRAPSFRCT 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,472
Number of Sequences: 438
Number of extensions: 2086
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)