Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16b13
         (601 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    33   0.009
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   3.3  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    23   5.7  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   5.7  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   5.7  
AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    23   10.0 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   10.0 

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 32.7 bits (71), Expect = 0.009
 Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
 Frame = +1

Query: 52  DWQKMKMEENMEKLGTELKTMGEQFADKVNALKVAETRLETRGYRPGIELAADEA-DVGL 228
           D  K+ +EE  EKL TEL  +     +  +AL +AE+ L+   +    E    E+     
Sbjct: 457 DETKVLLEEK-EKLQTELIELKRAVDESKSALSIAESELKICQHDEVTERRKLESLRYSY 515

Query: 229 KQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDLNDKNQSLET----DTRALEMR 396
           ++    L E   +LQ   +    T   LE A  K+  + N++ +  +T      +  E  
Sbjct: 516 EETEKDLEEKRARLQTLEEALPVTRTELETAKQKLQENANEERELTQTLRAVQGKLQESM 575

Query: 397 AALVPKRPQG 426
           AA+   R QG
Sbjct: 576 AAMQSTRSQG 585


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 24/115 (20%), Positives = 49/115 (42%)
 Frame = +1

Query: 25  DTQRARNELDWQKMKMEENMEKLGTELKTMGEQFADKVNALKVAETRLETRGYRPGIELA 204
           +T++   ELD Q+    +    L  E++   ++  +   ALK A+  + T      + LA
Sbjct: 234 ETRKQLEELDGQRKSSGDKQLLLTQEIQKAQDRLKNAQKALKDAKKDVVTAKDEKSV-LA 292

Query: 205 ADEADVGLKQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDLNDKNQSLE 369
            +     L +E   L  TI  L +++     +    E    ++ + + +K + LE
Sbjct: 293 TEHQQ--LLREKTKLDLTISDLSDEVQGDNKSKERAEQELERLKITIAEKEKELE 345


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 97  YPIFPYFLPFSFFA 56
           Y IF YFLPFS  +
Sbjct: 266 YMIFVYFLPFSLIS 279


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -1

Query: 229 SSQRPLHQPQVLFLVYSL*FPNESQLLSKHLLYQQTVRP*FSIRYP 92
           S Q+PL    VL   + L    + Q  ++HL  QQ +      +YP
Sbjct: 589 SLQQPLTTTTVLLSDHYLPLQQQQQQQARHLPQQQAIHHIHQQQYP 634


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 23/125 (18%), Positives = 49/125 (39%), Gaps = 2/125 (1%)
 Frame = +1

Query: 22   YDTQRARNELDWQKMKMEENMEKLGTELKTMGEQFADKVNALKVAETRLE--TRGYRPGI 195
            Y+   A  ++   + +++  +E L TE  T   +  D    L     ++   +R  R   
Sbjct: 1139 YNATLANGKIQDARRQLDNAIELLQTEGNTALARAKDISGHLGNQTNQISGISREARQYA 1198

Query: 196  ELAADEADVGLKQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDLNDKNQSLETD 375
            +    EAD  +KQ   + ++    L++  D      N  +     I+ ++    + L T 
Sbjct: 1199 DRFKAEADANMKQAQEAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKLNTV 1258

Query: 376  TRALE 390
            ++  E
Sbjct: 1259 SKLTE 1263


>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +3

Query: 240 SQFKGNHQATSREIRLCKSNLQCLGGCI 323
           +Q +G H  T  E+  C+      G C+
Sbjct: 142 TQLQGRHVRTDEEMEQCEIAEDIFGDCV 169


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +1

Query: 67   KMEENMEKLGTELKTMGEQFADKVNALKVAETRLET 174
            +MEE M K   E++ + ++ A    ++   E+R+E+
Sbjct: 896  QMEEEMAKARREVQALAKELAAIHQSIANIESRIES 931


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,750
Number of Sequences: 2352
Number of extensions: 10372
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)