Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16b11
         (634 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    25   0.81 
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    25   0.81 
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    25   0.81 
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    25   0.81 
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    25   0.81 
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    25   0.81 
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    25   0.81 
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    25   0.81 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.3  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   5.7  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   5.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   7.5  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   9.9  

>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +3

Query: 135 EYSSYTVYSNKYQSHVKQ-DHWNPIIIE 215
           +YS+Y  Y+N Y ++ K+  ++N I IE
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNIINIE 117


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +3

Query: 135 EYSSYTVYSNKYQSHVKQ-DHWNPIIIE 215
           +YS+Y  Y+N Y ++ K+  ++N I IE
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNIINIE 117


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +3

Query: 135 EYSSYTVYSNKYQSHVKQ-DHWNPIIIE 215
           +YS+Y  Y+N Y ++ K+  ++N I IE
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNIINIE 117


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +3

Query: 135 EYSSYTVYSNKYQSHVKQ-DHWNPIIIE 215
           +YS+Y  Y+N Y ++ K+  ++N I IE
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNIINIE 117


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +3

Query: 135 EYSSYTVYSNKYQSHVKQ-DHWNPIIIE 215
           +YS+Y  Y+N Y ++ K+  ++N I IE
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNIINIE 117


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +3

Query: 135 EYSSYTVYSNKYQSHVKQ-DHWNPIIIE 215
           +YS+Y  Y+N Y ++ K+  ++N I IE
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNIINIE 117


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +3

Query: 135 EYSSYTVYSNKYQSHVKQ-DHWNPIIIE 215
           +YS+Y  Y+N Y ++ K+  ++N I IE
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNIINIE 117


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 138 YSSYTVYSNKYQSHVKQDHWNPIIIE 215
           YS+Y  Y+N Y ++ K+ ++N   IE
Sbjct: 91  YSNYNNYNNNYNNYNKKLYYNINYIE 116


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 568  GSASRSPALEALVAATNKCYRCIE 497
            G   +SP L+ LV AT+    C+E
Sbjct: 1289 GKLRQSPRLKELVGATSIIKDCVE 1312


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 135 EYSSYTVYSNKYQSHVKQDHWN 200
           +YS+Y  Y+N Y ++   ++ N
Sbjct: 90  KYSNYNNYNNNYNNNYNNNYNN 111


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 135 EYSSYTVYSNKYQSHVKQDHWN 200
           +YS+Y  Y+N Y ++   ++ N
Sbjct: 90  KYSNYNNYNNNYNNNYNNNYNN 111


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 553 CGWRNPDGI 579
           CGW+NP  I
Sbjct: 153 CGWKNPSRI 161


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 132 PEYSSYTVYSNKYQSHVKQDHW 197
           P+YSS  + +N   SH  +  W
Sbjct: 100 PQYSSAVINTNVIVSHTGEVVW 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,777
Number of Sequences: 438
Number of extensions: 3462
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)